Basic Information

Insect: Catocala nupta
Gene Symbol: ush
Assembly: GCA_963675205.1
Location: OY776089.1:4742296-4746842[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0085 1.5 11.2 0.3 1 20 124 143 124 145 0.94

2 9 1.9e-05 0.0034 19.5 1.7 1 23 183 205 183 205 0.99

3 9 0.075 13 8.2 0.3 3 20 236 253 235 255 0.93

4 9 0.03 5.3 9.4 3.2 2 20 495 513 494 515 0.94

5 9 0.015 2.6 10.4 0.1 3 21 544 562 542 563 0.90

6 9 1.3 2.4e+02 4.3 0.0 2 23 592 613 591 613 0.94

7 9 0.0095 1.7 11.0 1.3 1 23 619 641 619 641 0.99

8 9 0.13 22 7.5 1.5 1 23 680 703 680 703 0.96

9 9 0.2 36 6.8 0.7 2 20 735 753 735 755 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0085	1.5	11.2	0.3	1	20	124	143	124	145	0.94
2	9	1.9e-05	0.0034	19.5	1.7	1	23	183	205	183	205	0.99
3	9	0.075	13	8.2	0.3	3	20	236	253	235	255	0.93
4	9	0.03	5.3	9.4	3.2	2	20	495	513	494	515	0.94
5	9	0.015	2.6	10.4	0.1	3	21	544	562	542	563	0.90
6	9	1.3	2.4e+02	4.3	0.0	2	23	592	613	591	613	0.94
7	9	0.0095	1.7	11.0	1.3	1	23	619	641	619	641	0.99
8	9	0.13	22	7.5	1.5	1	23	680	703	680	703	0.96
9	9	0.2	36	6.8	0.7	2	20	735	753	735	755	0.92

Sequence Information

Coding Sequence: ATGAATAGCAACCTGCATTGTTCTCCTGCAAATCGTGAGGTAACTTCGCAGTCAAAGGgtGAGGACGAGGAATGGGGAAACGAGAGCGAGGCGATGCCGGGAGAACCTCGCACGCCGAGCTCAGGGGGCGAGCGGGCCGCGTCCAGCGGAGGCGCGTCACCTGCGTCAGGGGGCTCGCCTGCCGCATCACCGCCTCGCCTGCGCCTCAACCCTAGCCTCGCCACGGATCCCGCGCTGGCCCCGCAGGCGGCAGCGCTCAAGCATGAGCCACCTTCACCATCACCGCCACCACCTCCCGCTCCACAGGCGCGGGACTACCTCGCGCTGACCGCAGCCGCCTTCCCAGGATTTCTACCCACTCCTCCGGGCTTTATGTGCAAGCCATGCGGCATTCGCTACTCTTCACTTAGCACTTTACAAGCACATCAAGAACATTACTGTTCGAATAGAAGGCCGAAACCGACAGAAGGTTCGGATACGCCAGCTGATCCTGCTGTAGATGAGTCTAGCAGTGACGCCAAGACGCCCCGGCCTGCAAGCAAGCAGTATACCTGTACTTACTGCAACTATAGCGCCGATAAAAAAGTTAGTTTGAACCGACACATGAGAATGCACTCTTCGTCCCCCGTTAGCAGTGGAACTCCAGCTCCGACCCCAGCCTCTAACGGTGAAGTGACCGAGGGTCCTCCAGTACAGGATCGCTACTGCGCAGATTGCGACATTCGCTTTAGCTCCATCAAAACGTACAGGGCCCACAAAGCACACTATTGTAGCACACGGCAGGTTGTAAAGCAGGCTCTAGCAGCGGCTAGAGGCGGCTCGGCCACCTCTGGTTCTTCACCGCCATCACCAGGAGCGACGCCTCCTGCTCAGAACCAATACGCCCTCGCGTTGCCTACAAATCCGATTCTCATAGTACCTTACTCGCTGCTACGAAGTGCTAGCACCCTCCCAGGTGCCACCTTACCTGATCCAGACACACCTTGCTTTTTGTTACCAAATGGAACATTCCAGCCGATTAGTCGAGCTTTATCTAACATAAACACAGATGGCAAGGAATCTGAAGTTTTGAAATCAGCCAATCGGCCAAGAGAGCCCTCAAGAGATGGTGCTACACCTTTGGATCTTAGTGTGCGACGGTCCCCTGAGTCTATAGTGACCGATGAGCATGAGAAAGAGAACAGAATACGATCGGCAACACCAGAACAGATCGTGTGTGCTCCGTCACTTCCAGGGTCTCCAGGCACACCGTCGCCTTCCCGACGATCATCGTCACCCAGTGGCGAAAGTTCACCTAAAAGAAAGCGACGCAACTCCAGGGGTCCAACACCAAAGCCCCCAAGTGTACCGTCTCCTCCAGAAGAGAAGTTTACTCCGGTAGTGCCACCTGCGATCATACCTCCCGCCCTTGCTTTACGTCTCGCATCAGAACTTCCAGTCAACGCTGTGTCTCCACAAGTGCTGGTCAAGCAAGGGGTATCGAAATGCAAGGAATGCAACATCGTGTTTTGCAAGTATGAAAACTATCGCGTTCATAAACTGCATTACTGTTCTGCGGGTGGGGGTGAAGAGCGCGCGAGTCCTGCGCCACCAGAGCCGGGGCCACCGCCGCAGTACCGTCAGCTGATCTGCATGGCATGCGGTATTCACTTCAGTTCGCTGGACAATTTGGCAACACATCAATCTATATACTGCACCAAAAGAGAGACACGGTCGCCTCGTAGCGCGCCAGCTGAGGCTCCTCGGCCAACGTCAGGGTCGGAAGGCGGGTGGAAATGTCCTTGCTGCGACGTCGTGTCACCGACTGCTGCAGCTGCCCAGCGCCACATGGAGGCCCACGCCGGAGTGAAGGCGTTCCGCTGCACCATCTGCCGATACAGAGGGAACACTCTGCGTGGCATGCGCACACATATACGTATGCACTTCAACAACAAGAAGCCTGCTGATTTGCAGGAGGAAAGCTACATCGCATGCGTCGTTGAAGAGGACAGTCGCGAAGCGACTTCTCCAAGTCTTGCAGTGGGTGGCGAGCGGGTCCATCGCTGCAGCAGCTGTGCCTACACCTCCACATACCGAGGTAACGTTCAGCGACACGCGCGTCTGGTCCACGCTACCGACGAACCTGATGAAGAACAAACCTCCCCAGTCCCAGTCGTGGACATCAAGAAGGAGCCAGAACCAGAAATGGAAGAAACCCCCAACTACTGCAAGTCCTGCGACATATCGTTCAAATACGTGAACACTTACAAAGCCCATAAGCAGTTCTATTGCACTGCTAACAATCAAGACGCGACTGCTAATAATAATGTGCCGACGCCTGCTAGAGTCACAGATACTCCTGTActatga
Protein Sequence: MNSNLHCSPANREVTSQSKGEDEEWGNESEAMPGEPRTPSSGGERAASSGGASPASGGSPAASPPRLRLNPSLATDPALAPQAAALKHEPPSPSPPPPPAPQARDYLALTAAAFPGFLPTPPGFMCKPCGIRYSSLSTLQAHQEHYCSNRRPKPTEGSDTPADPAVDESSSDAKTPRPASKQYTCTYCNYSADKKVSLNRHMRMHSSSPVSSGTPAPTPASNGEVTEGPPVQDRYCADCDIRFSSIKTYRAHKAHYCSTRQVVKQALAAARGGSATSGSSPPSPGATPPAQNQYALALPTNPILIVPYSLLRSASTLPGATLPDPDTPCFLLPNGTFQPISRALSNINTDGKESEVLKSANRPREPSRDGATPLDLSVRRSPESIVTDEHEKENRIRSATPEQIVCAPSLPGSPGTPSPSRRSSSPSGESSPKRKRRNSRGPTPKPPSVPSPPEEKFTPVVPPAIIPPALALRLASELPVNAVSPQVLVKQGVSKCKECNIVFCKYENYRVHKLHYCSAGGGEERASPAPPEPGPPPQYRQLICMACGIHFSSLDNLATHQSIYCTKRETRSPRSAPAEAPRPTSGSEGGWKCPCCDVVSPTAAAAQRHMEAHAGVKAFRCTICRYRGNTLRGMRTHIRMHFNNKKPADLQEESYIACVVEEDSREATSPSLAVGGERVHRCSSCAYTSTYRGNVQRHARLVHATDEPDEEQTSPVPVVDIKKEPEPEMEETPNYCKSCDISFKYVNTYKAHKQFYCTANNQDATANNNVPTPARVTDTPVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00050390;
90% Identity: iTF_00405472;
80% Identity: -