Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776103.1:5903340-5904506[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0081 1.4 11.2 2.2 1 22 166 187 166 190 0.90

2 7 0.057 10 8.6 2.6 1 23 195 216 195 216 0.85

3 7 2.3e-06 0.00041 22.4 1.7 1 23 222 244 222 244 0.98

4 7 0.00025 0.044 16.0 1.9 1 23 250 272 250 272 0.99

5 7 2.1e-07 3.6e-05 25.7 1.6 1 23 278 300 278 300 0.99

6 7 0.00016 0.028 16.6 1.3 1 23 306 329 306 329 0.97

7 7 7.8e-05 0.014 17.6 1.1 1 23 335 358 335 358 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0081	1.4	11.2	2.2	1	22	166	187	166	190	0.90
2	7	0.057	10	8.6	2.6	1	23	195	216	195	216	0.85
3	7	2.3e-06	0.00041	22.4	1.7	1	23	222	244	222	244	0.98
4	7	0.00025	0.044	16.0	1.9	1	23	250	272	250	272	0.99
5	7	2.1e-07	3.6e-05	25.7	1.6	1	23	278	300	278	300	0.99
6	7	0.00016	0.028	16.6	1.3	1	23	306	329	306	329	0.97
7	7	7.8e-05	0.014	17.6	1.1	1	23	335	358	335	358	0.95

Sequence Information

Coding Sequence: ATGGTTGGACCATTGCTactattaaaaatgttacattGCAGACGTATGAATGAACGAAACAATAGCACAGGATTAAAATCTACCATAAATGAGCCTTCTAATTCTTCACATGATGAGAACCCacgagaaattaaaatattgaaaacagaAAATTACGAGAATGTATGTAGAGTTTGTCTTAAAGAAGGATCTCTACCTATTTACGGCAACGATATGTCGGAGGATATTTCAGAAGCACTGAATACATTTGGCTGCATAGACGTCCGAATCGATGATCCATATCCAAAATGCCTGTGCCAAACATGCAACTCTCTTTTACAAGGagcaatattatttaggaaAACTGCACAACAATCTGATGAGATTCTCAAAAGACCTGTTATTGAAGAAGTgcctgataataataatttagatggTACTATGGATTTCTCCGATGAAGACATCCCCCTCAAATATATAAAGAGTGAAAAGAGAAAAGTTAAAAAACAGTATGTGCATCGTTGTAAAAAATgcaatatattattcaatacatTTAAAGACCTTGAAGAACATAGAATGTCTGAAGAACACGAGAATAAAAGACATGTGTGTCCATATTGTCACAAGTCGTATGCTCCGTTGTACTACAAAAAGCATTTAGCATTACACACAAAAGGTGCCTCATATGTGTGTGATGTTTGTGGAAAAAACTTTATAATGCAAGGACATTTCACAAGACATAGACTTACTCATTTCTACAAACTACCTTTTAAATGTTCTTTATGCCCATACAAGGGCAGATTTCGAGAATCTCTGAAAATGCACATGCGTTCTCACACTGGTGAAAAGCCATACCAATGTACCAATTGTCCCTCCAGATTTATAAATAAGAGTAATCTGAACAAGCATATGTTAACACATAAAGAAGCCCCTGATTTTAAATGTGATTCCTGCGGTAGAAGATTTTATACAAAACGAGAGGTAGAACTGCATTATAAAGTGGACCATGCGGGTGTTAAAGatcatgtttgtaatatttgtgGAAAAGCATTTGGATATAGAAAACAAATGATGAAGCATGAGCTCAAAGTACATAAGAGGGCAAAGTTGAGAAGTGGCCGAACACCTCTTTATTTAAAGGTGGAGAGTATGCAACAGCagggacaaaatattgtgacTGAGAGCTGA
Protein Sequence: MVGPLLLLKMLHCRRMNERNNSTGLKSTINEPSNSSHDENPREIKILKTENYENVCRVCLKEGSLPIYGNDMSEDISEALNTFGCIDVRIDDPYPKCLCQTCNSLLQGAILFRKTAQQSDEILKRPVIEEVPDNNNLDGTMDFSDEDIPLKYIKSEKRKVKKQYVHRCKKCNILFNTFKDLEEHRMSEEHENKRHVCPYCHKSYAPLYYKKHLALHTKGASYVCDVCGKNFIMQGHFTRHRLTHFYKLPFKCSLCPYKGRFRESLKMHMRSHTGEKPYQCTNCPSRFINKSNLNKHMLTHKEAPDFKCDSCGRRFYTKREVELHYKVDHAGVKDHVCNICGKAFGYRKQMMKHELKVHKRAKLRSGRTPLYLKVESMQQQGQNIVTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00282776;
90% Identity: iTF_00282776;
80% Identity: -