Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776107.1:5026028-5029581[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.5 88 5.6 3.1 1 23 257 279 257 279 0.96

2 8 0.00076 0.13 14.5 0.0 3 21 287 305 285 306 0.95

3 8 2.5e-05 0.0044 19.1 0.8 2 23 330 351 329 351 0.96

4 8 5.6e-07 9.8e-05 24.3 1.1 1 23 359 381 359 381 0.99

5 8 0.0011 0.19 14.0 1.4 1 23 387 409 387 409 0.97

6 8 3e-05 0.0053 18.9 3.1 1 23 415 437 415 437 0.97

7 8 0.00057 0.1 14.9 2.2 1 23 443 465 443 465 0.98

8 8 2.6e-07 4.6e-05 25.4 2.0 1 23 471 494 471 494 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.5	88	5.6	3.1	1	23	257	279	257	279	0.96
2	8	0.00076	0.13	14.5	0.0	3	21	287	305	285	306	0.95
3	8	2.5e-05	0.0044	19.1	0.8	2	23	330	351	329	351	0.96
4	8	5.6e-07	9.8e-05	24.3	1.1	1	23	359	381	359	381	0.99
5	8	0.0011	0.19	14.0	1.4	1	23	387	409	387	409	0.97
6	8	3e-05	0.0053	18.9	3.1	1	23	415	437	415	437	0.97
7	8	0.00057	0.1	14.9	2.2	1	23	443	465	443	465	0.98
8	8	2.6e-07	4.6e-05	25.4	2.0	1	23	471	494	471	494	0.98

Sequence Information

Coding Sequence: ATGGAAACCTTATACTGCCGCTTTTGCGCTGAGGCTAAGAGCTCAGAAAAGCTGCTGAACTTACAGAACGACAAGAAAAAACAGGACGAAATCGTATTAAAACTTGCGTTTGTTAACGCTGTTTATGTCAACGTTACTAACAGTGATATGTTGCCGAAAACAGTATGTTTAGTGTGTTACGACAGTCTGAATAAAGCTTATGACTTTCTGGACAGCGTAAAACGGGCACAGGACGTCTTAACCAACATATTTGCAGCCACAGAGGAAAGTAAATGCGACCTCTCAGAAGACGATCGAATGACTGCTTTCGACGATTTCCTTTGCAATGATGATTCTATTGATCTGAAATCGGAAGACAGCAAGCCAACTATATACACAGATGATTCCCAAATGGATATACGAGTCGTTGTAAAGCGAGAACTTAAGGAAGAGCCAGATTTAGACGACAATGCAACGTACAATGGCCCATTGCACGTCCAAGATATACTTGATGCGGCAATGTGTAACGCGCCGTACACATCAAACGTCACTATATACGCTAAAGAGAttcctaatttaaataaaaaggatgTCAAAACATGGCAAGATTACCCGTGGGTATGCGGATACTGTAATAGTGAGTTTTTGAACATAGAGATGTTAAGATCTCACTGTAAAGTGGCTCATGGTAAATGTTCAGCATTTATGTGCATTGATTGTAAAGTTGGGCGGCATGAAGACTTTGCCTCATTTGTTATACATGTCAGAAAACACAGGAAAAGTTTGagGCACCACTGCTACTACTGTGATTTTACCACCGACAAAACAGAGAACTTACCCGCACACATAAACAGCCACTTCTCCAAATCACAAATCGCTTGTCCACTCTGCGGAGAAATATTCAAAAGTGATGAATCACTGAAAATCCACTTAAGGGACTTCAACACCACCAAACAGAAGCGAAGACCGAGAAGAAAACCAGGCACACCCATCACAATAGAAGACTTAACTTGTGACTTATGTAAAAAGATATATAAGAACCCCAACAGCCTCCGCGATCACATGAAACTCCACACTATGGATAGGAAACGTAATTACACGTGTGACCGCTGTGGCAAAATGTTCTACAATAAAGGTACTCTCACATCTCATATACTAACACACGATAAAAACCGTCCACATGTCTGTAGGATATGTAACAAATCATTTTTGTACCCTAATATGTTAAGGAGACATGTTGAAATGCATTCTGGGATAAAACCATATTCATGTGAACAGTGTGGCCGTTGCTTCAGGCTACAATATCAGTTGAATACCCATAAAATCATTCATACAGACGCCATGCCTTATGTTTGCTCTTATTGTAATAAAGCCTTCAGGTTCAAACAAATCCTAAAGAATCACGAAAGGCAGCACACTGGGGCCAAACCATATTCTTGTCAGAATTGCGGCATGGAATTCACAAATTGGTCGAATTATAACAAGCATATGAAGCGAAGACACGGCACAGATACGTCTAAAAAGAAGATCACTCCTGAAGGTGTGTTTCCAGTTAATCCGGAGACGGGACAGATCATGCAAGTGGAAGATCCTGTAGGTACTGAGGAGTGGAAGACCAAGATTATGGTTCCAGCAAAGAGGGGGAAGAAGAAAGGTATAAAACAAGAGGATATTTAG
Protein Sequence: METLYCRFCAEAKSSEKLLNLQNDKKKQDEIVLKLAFVNAVYVNVTNSDMLPKTVCLVCYDSLNKAYDFLDSVKRAQDVLTNIFAATEESKCDLSEDDRMTAFDDFLCNDDSIDLKSEDSKPTIYTDDSQMDIRVVVKRELKEEPDLDDNATYNGPLHVQDILDAAMCNAPYTSNVTIYAKEIPNLNKKDVKTWQDYPWVCGYCNSEFLNIEMLRSHCKVAHGKCSAFMCIDCKVGRHEDFASFVIHVRKHRKSLRHHCYYCDFTTDKTENLPAHINSHFSKSQIACPLCGEIFKSDESLKIHLRDFNTTKQKRRPRRKPGTPITIEDLTCDLCKKIYKNPNSLRDHMKLHTMDRKRNYTCDRCGKMFYNKGTLTSHILTHDKNRPHVCRICNKSFLYPNMLRRHVEMHSGIKPYSCEQCGRCFRLQYQLNTHKIIHTDAMPYVCSYCNKAFRFKQILKNHERQHTGAKPYSCQNCGMEFTNWSNYNKHMKRRHGTDTSKKKITPEGVFPVNPETGQIMQVEDPVGTEEWKTKIMVPAKRGKKKGIKQEDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01492286;
90% Identity: iTF_00282722;
80% Identity: -