Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776093.1:5794340-5808623[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.002 0.36 13.1 1.1 1 23 324 346 324 346 0.99

2 12 1.2 2.2e+02 4.4 9.4 1 23 353 376 353 376 0.96

3 12 0.00015 0.026 16.7 0.3 1 23 407 430 407 430 0.97

4 12 0.032 5.7 9.4 0.1 2 23 439 461 438 461 0.94

5 12 0.0067 1.2 11.5 0.1 2 20 472 490 472 492 0.95

6 12 5.6e-05 0.0098 18.1 2.4 3 23 502 522 502 523 0.97

7 12 0.032 5.6 9.4 0.2 3 23 540 561 539 561 0.97

8 12 3.7e-05 0.0064 18.6 4.4 1 23 578 600 578 600 0.98

9 12 2.7e-05 0.0047 19.1 0.0 1 23 606 628 606 628 0.97

10 12 4.7e-06 0.00083 21.4 2.2 1 22 634 655 634 659 0.94

11 12 2.1e-06 0.00036 22.6 3.2 1 23 669 691 669 691 0.98

12 12 0.29 51 6.4 5.5 1 23 697 720 697 720 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.002	0.36	13.1	1.1	1	23	324	346	324	346	0.99
2	12	1.2	2.2e+02	4.4	9.4	1	23	353	376	353	376	0.96
3	12	0.00015	0.026	16.7	0.3	1	23	407	430	407	430	0.97
4	12	0.032	5.7	9.4	0.1	2	23	439	461	438	461	0.94
5	12	0.0067	1.2	11.5	0.1	2	20	472	490	472	492	0.95
6	12	5.6e-05	0.0098	18.1	2.4	3	23	502	522	502	523	0.97
7	12	0.032	5.6	9.4	0.2	3	23	540	561	539	561	0.97
8	12	3.7e-05	0.0064	18.6	4.4	1	23	578	600	578	600	0.98
9	12	2.7e-05	0.0047	19.1	0.0	1	23	606	628	606	628	0.97
10	12	4.7e-06	0.00083	21.4	2.2	1	22	634	655	634	659	0.94
11	12	2.1e-06	0.00036	22.6	3.2	1	23	669	691	669	691	0.98
12	12	0.29	51	6.4	5.5	1	23	697	720	697	720	0.96

Sequence Information

Coding Sequence: ATGGAAAACTTAAAGTATTGTAGAGCGTGTCTAGTGACTGATGTAAGGATGTACAGCTTGGATATAACATCTAATGACTCTATTGGACTTATTTATTCACATTTGGCGCAGATTCGGATTTGTGAAAGAAACCAGTATGTTTGTTTTGAGTGTGCAAGTTTACTTAGAAAGTATCAGGTGTTCAAGTCAAAATGCCATAGAGCACATAACATACTATCTAGCATCACAGTTAATTCAACAgagataacaaaagaaataattagaAACATAGATAGAAAAGAACACAAATTAGAATCTAATTTGATATTATCTACTACATCAGTGTGCAATGAAACCTTTACTGATAGGACTCATGAAGACTGTgaaaaaattacaaacaaaataaaagaatatgaaAATACTGAGATCTCAGAAGTCCAAATCAAAACTGTAATACAAATCACTGGGACAAATGGAAATAAAGGTcataatagtgaaaaatctgtcAGTGTAATTAAACTTGCTGCAGAAACAATATCAACGGAAACAacaattaaaagtaaaactaaAGAATCAAAATCTAGAAAcaggaaaatattaaatgaattacCAGACATTGTGAAAGATGAAAAGTCAGATATTGATAAATTGTCTGATGATTTCATTGATAATGATGTTGTTGAGTACCCTGAAGAAAATGTGCCTACAGAAATATCAACACATAAACGTAAAACAGGAGGGAAAGAACAGAGAACTAAACGGAAGAAAATTGAAACCGTTATAAACAGTGACGACAATCTTAGTGATGATGAACCATTATCAAAGTGTGCTGCTAAGATATCTGATAAAAAAATAGTAGACCCTCCAACAAAAACtagtttgaatttagaattctTTGAAGACTATGCTACCGTTATCTTTCTTACACCTGATGATGCGAAAAAAGAATTGTTGTCGAGAAAAGAATCGAGCAATTACAAAAGGTCTCCATTTAAATGTGATTTTTGTTATAAAGGTTATGAAGCAAAGGCTGCATTTGAAAATCATATGAAGAAACATGGTAAAGAGTATGGTGATTATGAATGTGATCTTTGCCACCTAAGGTTTCCAAAACACATATATTTGTGTAAGCACAAACTGAGTTGTCACAAAAGGAAGTTCAGCTGTAAACTGTGTCCATATGTGTGTTATTGCATGTACCAGGCTAGAACCCATGTCAGTCTCCATAAAGGAAAGAAATATCCCTGTAAAGATTGCAATGAAATATTCAGTATGCCTAACAGCTTACTCATGCACAAGCGCGTCAAACACATGGATGAAACAGTGTCCGAGAGCGTGTGTGAACTCTGTGGGAACACTTTCGGCTCGCCTCGAGGACTCTTCTTGCACAATATGAAGTTGCATAGAACggaTAAGAACAATAAACAAGGTCCTAAATGTGAAGAGTGTGGAGTCCACTTTTCTTCGGAAGTAGCTTGGAAGCGTCACCTGGTGTTATCTTCGAAACATTCAGTCATCAACGGCTGCAAATATTGCGGTGAAATATTCAAGAATATAGAGGAACTGAAATCTCACAAGCGTACTCATCACCCGCGCGTCAAACAAAAGCTATCTCATAACAAGAAACTACCTGGTGCCTGTGATATTTGCGACAAATGGTTGACGAACTTCGTCCAATACAATACCCATATGAATACCGAACACCCGCTCTCGGACGAGACGATGAAACTGAGTGCAAAGGACCCGACGCCGTTCGTGTGCGAAGTATGTGGGCAAACGTTTAAGCAACAGTGTTTCCTGACATACCATCAGCGTAAACACACAGGCGAGCGGCCATACTCGTGCGACGACTGCGGCAAAACCTTCGTGATGGCGGGCGCACTCTCCGTACATCGAACCGTGCACTCGCGCAAACGCAACTACAAGTGCCATTTGTGCCAGAGGGTCTTCTCCTTCAAGAGTGCGCTCAACAAACATATCAAGGTAATGTTCATACACCGCACCGTGCACTTACGCAAGCGTAAGTACAAGTGCCATTTGTGTCAGAGGGTCTTCTCCTTCAAGAGTGCGCTCAACAAACATATCAAGGCCCATCTAGGCATACGTCCGCACAAATGCACGATATGTGAGAAAGGCTTTCTCCACATGTGCGATCTGAAGCTTCACATCAAATATGTTCACGATAAGGTGCCTTGGCCTAAGAAGAAAAGCAAGCGGAACGTGGacgataataatacatatttagagTACAATGATGCTTAA
Protein Sequence: MENLKYCRACLVTDVRMYSLDITSNDSIGLIYSHLAQIRICERNQYVCFECASLLRKYQVFKSKCHRAHNILSSITVNSTEITKEIIRNIDRKEHKLESNLILSTTSVCNETFTDRTHEDCEKITNKIKEYENTEISEVQIKTVIQITGTNGNKGHNSEKSVSVIKLAAETISTETTIKSKTKESKSRNRKILNELPDIVKDEKSDIDKLSDDFIDNDVVEYPEENVPTEISTHKRKTGGKEQRTKRKKIETVINSDDNLSDDEPLSKCAAKISDKKIVDPPTKTSLNLEFFEDYATVIFLTPDDAKKELLSRKESSNYKRSPFKCDFCYKGYEAKAAFENHMKKHGKEYGDYECDLCHLRFPKHIYLCKHKLSCHKRKFSCKLCPYVCYCMYQARTHVSLHKGKKYPCKDCNEIFSMPNSLLMHKRVKHMDETVSESVCELCGNTFGSPRGLFLHNMKLHRTDKNNKQGPKCEECGVHFSSEVAWKRHLVLSSKHSVINGCKYCGEIFKNIEELKSHKRTHHPRVKQKLSHNKKLPGACDICDKWLTNFVQYNTHMNTEHPLSDETMKLSAKDPTPFVCEVCGQTFKQQCFLTYHQRKHTGERPYSCDDCGKTFVMAGALSVHRTVHSRKRNYKCHLCQRVFSFKSALNKHIKVMFIHRTVHLRKRKYKCHLCQRVFSFKSALNKHIKAHLGIRPHKCTICEKGFLHMCDLKLHIKYVHDKVPWPKKKSKRNVDDNNTYLEYNDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -