Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776088.1:3663041-3667794[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.052 9.1 8.7 2.5 3 23 39 60 37 60 0.91

2 14 0.00033 0.059 15.6 1.9 1 23 98 121 98 121 0.96

3 14 0.0014 0.25 13.6 3.9 1 23 123 145 123 145 0.98

4 14 0.0037 0.65 12.3 0.1 1 23 181 203 181 203 0.97

5 14 1.2 2.1e+02 4.4 2.1 3 23 232 253 231 253 0.90

6 14 0.56 97 5.5 7.6 1 19 260 278 260 282 0.89

7 14 0.0015 0.26 13.6 0.1 1 23 288 311 288 311 0.91

8 14 0.0015 0.27 13.5 0.2 1 23 321 344 321 344 0.97

9 14 2.3e-05 0.0041 19.2 0.2 1 23 349 373 349 373 0.98

10 14 0.61 1.1e+02 5.3 1.8 3 23 381 401 381 401 0.96

11 14 0.0036 0.64 12.3 0.2 1 23 406 428 406 428 0.92

12 14 0.00034 0.06 15.6 1.3 1 23 434 456 434 456 0.97

13 14 1.3e-06 0.00022 23.2 1.2 1 23 462 484 462 484 0.98

14 14 0.00036 0.064 15.5 1.9 1 23 490 513 490 513 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.052	9.1	8.7	2.5	3	23	39	60	37	60	0.91
2	14	0.00033	0.059	15.6	1.9	1	23	98	121	98	121	0.96
3	14	0.0014	0.25	13.6	3.9	1	23	123	145	123	145	0.98
4	14	0.0037	0.65	12.3	0.1	1	23	181	203	181	203	0.97
5	14	1.2	2.1e+02	4.4	2.1	3	23	232	253	231	253	0.90
6	14	0.56	97	5.5	7.6	1	19	260	278	260	282	0.89
7	14	0.0015	0.26	13.6	0.1	1	23	288	311	288	311	0.91
8	14	0.0015	0.27	13.5	0.2	1	23	321	344	321	344	0.97
9	14	2.3e-05	0.0041	19.2	0.2	1	23	349	373	349	373	0.98
10	14	0.61	1.1e+02	5.3	1.8	3	23	381	401	381	401	0.96
11	14	0.0036	0.64	12.3	0.2	1	23	406	428	406	428	0.92
12	14	0.00034	0.06	15.6	1.3	1	23	434	456	434	456	0.97
13	14	1.3e-06	0.00022	23.2	1.2	1	23	462	484	462	484	0.98
14	14	0.00036	0.064	15.5	1.9	1	23	490	513	490	513	0.97

Sequence Information

Coding Sequence: ATGGAGTCACCCATTCAGCTAGACGAGCCCGGCTTCGAGTGGAGGTTGGAGCTAGAGCAGCTGATCGCCGGCTGCCCTAAGCCGACCGCGATCGACGTGATCGGCGGCATCTTCTGCAATTTATGTCACTTAACGTTCGGCAATAAGAAAGAGTTTGACCGTCACTACACTGAGCAACACAACATCACTCCCGCTGGCATAGTGTACACTTGTGTGGTGTGTCGCAGGGAGATAGCCCCGTATCCGAACTTCCGCAACCACTGCTACCAGGCGCACGTCGTTAAAGACAGGTTTAAATGTGAACATTGCAACAGGCAGTTTTCAAAGCAATCCATATTGAACAGTCACATTGCTTCTGTGCACATCTTTAAATGTTTAGCATGTCAAAAACAGTTTTCAACAAAAAATGAATTACATACCCATCAAAATCTTCACAAACGTGAGAAAGAAAAGCCACCTTACCCATGTCACCATTGTTCAATGACCATAGACAGTGTTGATATGTGCGAGATGCACATCGATGAGCACTGCAAGATTTTGTACCCCTGCCCCATATGCGACGAGATAACCAGCAGTAAGATGGAAACTGCGAAACATCTTACCAAGCATTTCGATGAAGTACTTACAAATGAACAACTGGACAGCCCCGAAATTAGTGCAGAATGCTCCGTGGACATGCTTGGAGGAGTGCTCTGCTGTTATTGCGATGAACTATTTAAGAATCGTACAGACTTTGATCTTCACTTCATCAACGAGCATTCAGATAAAGATATCATTTACTCATGCAATATTTGTGGCAAACAGTACcgtaaatatcatttatttgccAACCACTGCCATTTCCATGTCTCCAGAAATAGGTTTGAATGTGTAGAGTGCGGCAAGCTGTTCCCGCGGCTGTCGCTGCTGGTGCTGCACACGGCGGCGTTCCacagcgccggcgccgccgccgacaaGCCTTTCAGCTGCGTCCAGTGCGGACACGCCTTCGGCACCGCGCCCAGGCTTCGAGAACATTTGCGTGTCGTGCATACTGTCAACGCCTTCACTTGTCCGGAGGACGGGTGTAATATGACATTTGAGACACCCAGAGAACTAATCCTCCACCAGCGCAAGCACCAGGTGTCGCGTGAGAACTGGTGTCGCCAGTGCGGCCTGCAGTTCACCACGCTCACCTCCTGCCAGGCGCACCTCGACGTACACCGCAAGAAACACTACGCCTGCCCCGTCTGCAACAAGGAGTACCGCGAGAAATACCTCATCATGAAACACATACCCACACACTTCGAGTCAGTCTTGCATGTATGCAAGGTCTGCGGAAAAGTCTTCAACGCAAGAAACAGACTCGTCGAACATACAAAAACACATTCTGAAATACGACATCACAAGTGCAGCTATTGCGGCAAAGGGTTCATCAAGCCATATCAGTTGGAACAGCATCTAAACATCCATACCGGCTCCAGGCCCCACAAGTGCATGGTTTGCTCCAAATCGTTTGCAAGCTACCCTAATTGGAtgaagcatttaaaaaaaatacacaacatAGATAAGAACAAATTAAAAACGCTCGCCGATGACAATAAAACGAAATTAACGAAAAACGTGGCCCCtgttaagaatataaaaaacgTTGATAAAAGCGATATAGAAGTTAAAAGCGaatcgggaatcgaatccacgaGTCCGGATATGTCGTTGGATACGTACATATTCGCCGAGTCCGACGATAGTACCATGGATAGTATAGACCCGGCGATCATAGAGAAAGATTGGTGCATCTTGAATGAAAACGCATTTGTTGAAAATAGTCTCCAGTATACAGACATGTTGTCTGTGAACAACATTACATTTGAAACTGAAACAAAGGCTGGTCCTGCGGAGTGCGCGGTGGTGGGGCAGGGCGCGGTGTTGCGCGAGTACGGGCCCGAGTTCAACGTGGACGACGGCATCCACCTCGACGACCATTACCTGCCGCACATCGACCCACTGCTCACCATCAAGCACCCCGCACAACCCGCCCCGCCGCCCgtgcacgcacacacgcacgcacacacgcaccgCCTCTACGTGAACAACTACGAGCTGGCCTCCCCCTCCGCCCCGCAGACCGCCTGGGAGCCCCTCATCACCAAGGTGTACCACGCTTACGAACCAGACGACGTGAACAGACTCTCCATCATGAACACAGATATTTACTAA
Protein Sequence: MESPIQLDEPGFEWRLELEQLIAGCPKPTAIDVIGGIFCNLCHLTFGNKKEFDRHYTEQHNITPAGIVYTCVVCRREIAPYPNFRNHCYQAHVVKDRFKCEHCNRQFSKQSILNSHIASVHIFKCLACQKQFSTKNELHTHQNLHKREKEKPPYPCHHCSMTIDSVDMCEMHIDEHCKILYPCPICDEITSSKMETAKHLTKHFDEVLTNEQLDSPEISAECSVDMLGGVLCCYCDELFKNRTDFDLHFINEHSDKDIIYSCNICGKQYRKYHLFANHCHFHVSRNRFECVECGKLFPRLSLLVLHTAAFHSAGAAADKPFSCVQCGHAFGTAPRLREHLRVVHTVNAFTCPEDGCNMTFETPRELILHQRKHQVSRENWCRQCGLQFTTLTSCQAHLDVHRKKHYACPVCNKEYREKYLIMKHIPTHFESVLHVCKVCGKVFNARNRLVEHTKTHSEIRHHKCSYCGKGFIKPYQLEQHLNIHTGSRPHKCMVCSKSFASYPNWMKHLKKIHNIDKNKLKTLADDNKTKLTKNVAPVKNIKNVDKSDIEVKSESGIESTSPDMSLDTYIFAESDDSTMDSIDPAIIEKDWCILNENAFVENSLQYTDMLSVNNITFETETKAGPAECAVVGQGAVLREYGPEFNVDDGIHLDDHYLPHIDPLLTIKHPAQPAPPPVHAHTHAHTHRLYVNNYELASPSAPQTAWEPLITKVYHAYEPDDVNRLSIMNTDIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677927;
90% Identity: iTF_00282706;
80% Identity: -