Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776097.1:11205794-11231631[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.11 19 7.7 0.3 6 20 12 26 7 28 0.88

2 13 8.8 1.5e+03 1.7 0.1 2 21 34 53 33 54 0.84

3 13 6.4 1.1e+03 2.1 0.3 1 12 210 221 210 230 0.88

4 13 0.0015 0.26 13.6 0.2 1 23 388 410 388 410 0.96

5 13 0.0031 0.55 12.6 2.2 1 23 424 446 424 446 0.99

6 13 1.5 2.6e+02 4.1 0.3 1 9 471 479 471 492 0.87

7 13 4.7e-06 0.00082 21.4 0.6 3 23 500 520 498 520 0.97

8 13 0.00045 0.079 15.2 2.8 1 23 536 558 536 558 0.99

9 13 1.5e-06 0.00027 23.0 4.5 1 23 564 586 564 586 0.98

10 13 0.00056 0.099 14.9 5.2 1 23 592 614 592 614 0.97

11 13 2.1e-06 0.00037 22.5 0.4 1 23 620 642 620 642 0.98

12 13 0.00047 0.082 15.2 1.1 1 23 646 668 646 668 0.98

13 13 0.0046 0.8 12.0 0.1 1 23 676 699 676 699 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.11	19	7.7	0.3	6	20	12	26	7	28	0.88
2	13	8.8	1.5e+03	1.7	0.1	2	21	34	53	33	54	0.84
3	13	6.4	1.1e+03	2.1	0.3	1	12	210	221	210	230	0.88
4	13	0.0015	0.26	13.6	0.2	1	23	388	410	388	410	0.96
5	13	0.0031	0.55	12.6	2.2	1	23	424	446	424	446	0.99
6	13	1.5	2.6e+02	4.1	0.3	1	9	471	479	471	492	0.87
7	13	4.7e-06	0.00082	21.4	0.6	3	23	500	520	498	520	0.97
8	13	0.00045	0.079	15.2	2.8	1	23	536	558	536	558	0.99
9	13	1.5e-06	0.00027	23.0	4.5	1	23	564	586	564	586	0.98
10	13	0.00056	0.099	14.9	5.2	1	23	592	614	592	614	0.97
11	13	2.1e-06	0.00037	22.5	0.4	1	23	620	642	620	642	0.98
12	13	0.00047	0.082	15.2	1.1	1	23	646	668	646	668	0.98
13	13	0.0046	0.8	12.0	0.1	1	23	676	699	676	699	0.94

Sequence Information

Coding Sequence: ATGGGGGACTTACAATTAGATTGCCCTCTTTGCTGCGATAAAACTTTTGACACTAAACAAGCACTACTTGAGCATTTAGCTAATATCGTAGCTAATCTATATTGTCCAATTTGCAATAGCAAGTGGAGCTCAGTAGAAGGCCTTACTgaacatttaaatcattatgATTGTCAAAATGTACAAACTGATACTgtacaaaaaattgttataTATGAGCAAAGCATGCATGTAGACAACATTGAAACACAAAACTCTGAAGTAAAAGATCCTGATATTAAGCCACTATCAGATGAATTAAGCACAACTGATACTGGTACACAGTTTATAACTGACCAAAGTTACGAATGCCAGGATGATACTGGTGATGTCACCAAAATGTATGCTGAATTGATAAGTAAGCAACTGTCAAAGCCAATTCTACAAACACaggaactaaaattaattaaagaggATGGGGAGAGCAGGTATATGATTGTAACTGAAACTGGTGAATATGGTGAAAGTGCAATTGTGACCAAACAGAATGATGATGGTACTATATCCCTGACTGCAGTTAATGACATAAAAATAGAGACAGACACCCTGATAGCTCCTGATTCTGAGTCTGGAAACAATGAGGGGGAGATATACAGCTGCAATGCTTGTAAGGTCTCTTTCTCATCAATTGTGGACCATATACAAAACTACCATAGTGATCAAGATGTACTTGTAGagGAAGCACCGGGGCAAGAGCTGAACAATGAAACATCAGTGGAATATGACCCACTGGAGGTAGAAGAAGATTCACCAACAAGTGATAAGCAGCCGCCGAGGCGTGTCATCACTGACACTGGTGATATTGTTGAGGAGCCAGTGATTTTCAAAACTGAGAACACTGAGATACAACAAGATACTATTGACGCAATCATAAAGCACCCGAAATTAGTACTGGACAAGCAGGGGCGTGCTTACACCAGACGTTATGTACAAATCGACAAAGTGTCTGAACCTGCCACCAATACTGCTACTCCTGCTAGCTCTGAGATAGCATACCACAAAGTCGTCACAAAGGATGTGCAGACGAAAACCGGCTTTACGGTCAAAATGTACCATTGCATGTCGTGCAATGTGAATGTCAGCAACTTGAATGAGTTCCAAACACACCCCTGTAAAATTTtaaaGCATCCATGTCTCCGATGTCCTGCAGCGTTCGACAGTTCTAAATCTTTAAGTGCTCATATGAAGGCACATAAAGTAAAAGCAGATGGCAGTCCCGAAGTACCAATAACGTACGAGTGCGAGGTGTGCTGCACAGTGTTCCCCTCTAACAAGTCTTTGAAACTACACAAACGAATGCACGATCCTGTCAAGGTCCGTCCGATCGAACCTCCAGTGGAAAGCAATGATGGCACAGAACTGACGGGTGATCTATACCGCTGCCATATCTGCGAGAAAATGATCCCGTTCAATTACCGCACGATACATGAGAACTCACACAGCACGAACAACAAGATGAACTGCAGTATATGTAACAAGAAGTTCAGTTCCCTAGACTATTTGGAGATGCATATGAATGTACACAACTTGGATAAAGTGACTGTTAATAATCAAGATAAATCACTACCATACAAATGTCTGTATTGCAACAGAAGATTCGCGAGGCCGCACGAGAAAGTAAAGCACGAAAGGATTCATACTGGCGAGAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGCCCCTACGCCTGTCCGCACTGCGGGAAACGGTTCAAAGCTCACAGCGTATACAACCATCACTTACTGACACATTCTGAGGTGCGCGCCTACAAGTGTCCGTACTGCCCCAAAGCGTTCAAGACCTCAGTCCAACTCGCTGGACACAAGAACTCGCACACCAAGCCATTTTCATGCCAACATTGTAACAGGCCGTTCGCGTCTCTATACGCGGTGCGCGTGCACACGGAAACGCACGCGCGCCAGAACAACTTGAAGTTCGCGTGCGCGCTGTGCGGGGCCAGCTACGCGCGCGCGTTCGCACTCAAGGACCACGTCAAGCACGCGCACAAACAGGACGTGCCTGCCGCCGACGCTGATGCTGACAATGACGCCGCCGACACCTTGGCCGATAATAATCAAGATGAAGAGTGGATGCGAGAGAACTCAACAGACGCGGAGGGGATACAATCTCTCAATAAAGAGTTACAACAAGATatAACAGAATTGGAAATGAATGGCAACGAATTAATAGTTCCTTAA
Protein Sequence: MGDLQLDCPLCCDKTFDTKQALLEHLANIVANLYCPICNSKWSSVEGLTEHLNHYDCQNVQTDTVQKIVIYEQSMHVDNIETQNSEVKDPDIKPLSDELSTTDTGTQFITDQSYECQDDTGDVTKMYAELISKQLSKPILQTQELKLIKEDGESRYMIVTETGEYGESAIVTKQNDDGTISLTAVNDIKIETDTLIAPDSESGNNEGEIYSCNACKVSFSSIVDHIQNYHSDQDVLVEEAPGQELNNETSVEYDPLEVEEDSPTSDKQPPRRVITDTGDIVEEPVIFKTENTEIQQDTIDAIIKHPKLVLDKQGRAYTRRYVQIDKVSEPATNTATPASSEIAYHKVVTKDVQTKTGFTVKMYHCMSCNVNVSNLNEFQTHPCKILKHPCLRCPAAFDSSKSLSAHMKAHKVKADGSPEVPITYECEVCCTVFPSNKSLKLHKRMHDPVKVRPIEPPVESNDGTELTGDLYRCHICEKMIPFNYRTIHENSHSTNNKMNCSICNKKFSSLDYLEMHMNVHNLDKVTVNNQDKSLPYKCLYCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPYCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHARQNNLKFACALCGASYARAFALKDHVKHAHKQDVPAADADADNDAADTLADNNQDEEWMRENSTDAEGIQSLNKELQQDITELEMNGNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00282700;
90% Identity: iTF_00282700;
80% Identity: -