Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776107.1:6233714-6235300[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 9.4e-06 0.0016 20.5 0.9 1 23 243 265 243 265 0.99

2 9 0.024 4.2 9.8 3.2 3 23 273 294 272 294 0.92

3 9 0.0099 1.7 11.0 0.3 2 20 301 319 300 320 0.95

4 9 6.1e-06 0.0011 21.1 0.8 2 23 343 364 342 364 0.96

5 9 2.5e-06 0.00043 22.3 2.7 1 23 371 393 371 393 0.98

6 9 5.5e-05 0.0096 18.1 0.5 1 23 399 421 399 421 0.97

7 9 1.8e-05 0.0031 19.6 1.9 1 23 427 449 427 449 0.96

8 9 0.0002 0.034 16.3 4.4 1 23 455 477 455 477 0.98

9 9 2e-05 0.0035 19.5 3.9 1 23 483 506 483 506 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	9.4e-06	0.0016	20.5	0.9	1	23	243	265	243	265	0.99
2	9	0.024	4.2	9.8	3.2	3	23	273	294	272	294	0.92
3	9	0.0099	1.7	11.0	0.3	2	20	301	319	300	320	0.95
4	9	6.1e-06	0.0011	21.1	0.8	2	23	343	364	342	364	0.96
5	9	2.5e-06	0.00043	22.3	2.7	1	23	371	393	371	393	0.98
6	9	5.5e-05	0.0096	18.1	0.5	1	23	399	421	399	421	0.97
7	9	1.8e-05	0.0031	19.6	1.9	1	23	427	449	427	449	0.96
8	9	0.0002	0.034	16.3	4.4	1	23	455	477	455	477	0.98
9	9	2e-05	0.0035	19.5	3.9	1	23	483	506	483	506	0.98

Sequence Information

Coding Sequence: ATGTCGGAAGAAGAAGATTCGTATTGTCGTTTATGCGCCGAACCAACACCGAAATCACAGCTAATAGCGCCAGACGAAGATGTTGGACTGAATTCGAAAATAGCAACAAAAATGTTATGGATTAATATTGATGTTTCTACATCAAATACTCTGCCAAACTCGATTTGTTTCTCATGTTTCGACCTATTGGAGCGTACTTGGTCTTTCTTAAACAACGTAAGAACCGCGCAGACAAAATTAAacgaaatatatttgaaaaatgtTGAGCTCGAAACATCATCTGCCGAGGTCAAAGCAGACCCAAATGTCATAGCAAAACCTGTCAATACAGACTGGGAAGATTTCGAGGAGCTGAAACAAGAGGTAAAGCCTGATATTTTGAATGAACAACTTCAATTAATGACTGTAGATCCAAACACTTTGATAGACTTAGGTGTTGTGAAAACTGAAAGAAACAGCAGCCATGAGGATGAATACAGGCCTGAATCTGATGGTTTTAATACCACTGATAGCGATATGCCCCTCTATCAGGCTACTAAAAGGAagaaaatgaagaaaaaaaagaaattgagaTACCATTCCGAGGATTCAAATATTCTTTTAGATGAGACAAAACAATTAACATGGGAGGACTATGTGTGCATTTGTGGGGCTTGCGACGCTCAGTGTAAGAATGTAATGTCACTCCGTCTACATTCATTGCAAATACATGCACATTGTTGCATGTTCAAGTGTGCTGACTGTGGCAAAGTGACGTCAAATAATAAATCCTTTCTCAGTCATGTTAGAAGTCATTATATGTTTCTACGAGAGTGCTGTGAGTATTGCAACAGGAGGTTCTTAAATAACCCAGACTTGAAAAGGCACCGTAGTGAGTCACATAGTGaagcaataaaaacaacatgTCGGCATTGTGGTTCAACATTTGATAATGAAGAACTACTACAGGACCACCTTGTTTTATACAGTAGAAACAACCGGAAACGCAGTATAAAATCAGAAAAACTAGACTTGACTGATGAATTGAAATGTGATCTTTGtgataaagaatttaaaaccCGTGGCAATCTGATGACGCACAAACTAGTACACACAGAACGTAAAAGAAACTTTTCTTGTCACATTTGTGGTAAAATGTTTTTTACTAAAGGCACATTGATAACGCATTTAACAACTCATGATGATACAAAACCATTTAAATGTGAATTCTGCCCATTAACATTCAAAGCTAGGGGTAACCTGCAATCCCATATTAGCCTTCATTCTGGTGCTAAACCGTTTGTGTGTGAACAATGTGGTAAAAGCTTCCGTGCCAAACGTCACTTAAAATCCCATTCCATAGTGCACACAGACTTAATGCcttatgtttgtaatttttgCAAAAAGACTTTTAGATTTAAGACACGTTTAAATCTCCATCTACGTCAACACACTGGTGCAAAGCcgtataaatgtgtttattgtcaaagagactttacaaacgggTCTAATTATAAGAAGCATATGAAacgtaaacataatattgatacatcaagaaagaaatataataatgttgtgaCACTAGAAGGTATTGAGTCAAGTAAATGA
Protein Sequence: MSEEEDSYCRLCAEPTPKSQLIAPDEDVGLNSKIATKMLWINIDVSTSNTLPNSICFSCFDLLERTWSFLNNVRTAQTKLNEIYLKNVELETSSAEVKADPNVIAKPVNTDWEDFEELKQEVKPDILNEQLQLMTVDPNTLIDLGVVKTERNSSHEDEYRPESDGFNTTDSDMPLYQATKRKKMKKKKKLRYHSEDSNILLDETKQLTWEDYVCICGACDAQCKNVMSLRLHSLQIHAHCCMFKCADCGKVTSNNKSFLSHVRSHYMFLRECCEYCNRRFLNNPDLKRHRSESHSEAIKTTCRHCGSTFDNEELLQDHLVLYSRNNRKRSIKSEKLDLTDELKCDLCDKEFKTRGNLMTHKLVHTERKRNFSCHICGKMFFTKGTLITHLTTHDDTKPFKCEFCPLTFKARGNLQSHISLHSGAKPFVCEQCGKSFRAKRHLKSHSIVHTDLMPYVCNFCKKTFRFKTRLNLHLRQHTGAKPYKCVYCQRDFTNGSNYKKHMKRKHNIDTSRKKYNNVVTLEGIESSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677939;
90% Identity: -
80% Identity: -