Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776095.1:1971598-1974565[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.1e-06 0.00055 22.0 3.8 1 23 276 298 276 298 0.96

2 11 0.00023 0.04 16.1 0.8 1 23 304 327 304 327 0.95

3 11 9.3e-06 0.0016 20.5 0.5 1 23 339 361 339 361 0.98

4 11 0.0037 0.64 12.3 2.1 1 23 368 390 368 390 0.97

5 11 0.00032 0.056 15.7 1.4 1 23 396 418 396 418 0.99

6 11 0.00019 0.033 16.4 0.7 1 23 424 447 424 447 0.98

7 11 0.0037 0.65 12.3 1.8 2 23 453 472 452 472 0.97

8 11 7.7e-07 0.00014 23.9 2.4 1 23 478 500 478 500 0.97

9 11 1.7e-05 0.0029 19.7 1.1 1 23 506 528 506 528 0.99

10 11 7.1e-05 0.012 17.7 0.3 1 23 534 557 534 557 0.97

11 11 0.04 7.1 9.1 1.6 1 21 563 583 563 584 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.1e-06	0.00055	22.0	3.8	1	23	276	298	276	298	0.96
2	11	0.00023	0.04	16.1	0.8	1	23	304	327	304	327	0.95
3	11	9.3e-06	0.0016	20.5	0.5	1	23	339	361	339	361	0.98
4	11	0.0037	0.64	12.3	2.1	1	23	368	390	368	390	0.97
5	11	0.00032	0.056	15.7	1.4	1	23	396	418	396	418	0.99
6	11	0.00019	0.033	16.4	0.7	1	23	424	447	424	447	0.98
7	11	0.0037	0.65	12.3	1.8	2	23	453	472	452	472	0.97
8	11	7.7e-07	0.00014	23.9	2.4	1	23	478	500	478	500	0.97
9	11	1.7e-05	0.0029	19.7	1.1	1	23	506	528	506	528	0.99
10	11	7.1e-05	0.012	17.7	0.3	1	23	534	557	534	557	0.97
11	11	0.04	7.1	9.1	1.6	1	21	563	583	563	584	0.95

Sequence Information

Coding Sequence: ATGGCTAACGTAAAACGTAGAGTAAAGGCACCCAAAAGTGCTCTCAAAACTGTATCTAAAAAGAAACAGACTGATGGTCGTACTAAAAAAGGGCTAAAAACCTTACAAGCTACGATTGAAGTTGAATCAACTGAAATCGAAAGCAATATTGAAGATCCTGATATTGTCAAGAAGCGGAAAGCTGATGATAACTTATTGTTTTTGACTCCAGATGAAAAAGTAAAGTATTTTCTGCAAAATGGACACAATCTCAAAGATTCATTTGAAGTAACAACCACTGTAAAAGCTGGGAGagctaaacaaataaaaatgagtaaAACTGGACCTGTCTCCAATACTTATGAATTATCTAATCCTGTCAAGACTAAAAGTGGCCGCCTCAAAAACTCAAAGTTTAAGTATTTAAACCTTGTGGATAACATATTACAAAGTGAATTTGGTGTGATCCCAGGTAACAAACATAAATCAACATTAAAGAGTGCTATAGCTTCATATAATGGAGTAACCAATAATAATGATACTGAAATcacaaatcaaaataataaaacaaccagTGTAAATAGTAAAACTTCAGACCGCAGTAAGAAAAATGCCAGTAGGGTTGTGTCAACAGTCACTTCAAATACTGCACCTGTGGTAAAAAACATTTCTGAGAAgccaaaaaataacaaacacccTTTTGTATTAACACATACTACAAATGAACCAAAACGGTCACCTACTCGTGGCAAAGAcaaactaaaaaagaatcaaGAATGTGAACCAAGTCCAACAAAAACTAAACAAGTTGCTCTAGGCAATGGTGTGGTTTTAACATTATCCTTATTTGAGTGTGACTAttgcaataaaacatttaacagGAAACATTCACTTGTAAGGCATATTTATCTACACCTTGGTAGAAAACCACACATATGCCCAGTTTGCCCGAAAACATTCCGTATTCTTAAGAACATGAAGAGTCATATTGACCGTGATCATTGtgttcaaaatgttgatgaGACTACTGAAACATTTTCTTGCGATATCTGTGACAAACCATTTTTAACTAAAGAAAACCTAACTTTACATCTAAGAAGTCATATTAAAGgtgaaaatacatttaaatgtatCTATTGTGATAAGAAATTTTCTTATCAATTGTTATTAGTGCAACATGAGAAGAAACATTTGGTGACAGGTAAATATCAGTGCACATTATGTGACATGAAATATAATTCACGAGACAAGCTTTATGTGCATGTAAAAAGCCATTTAAAGCTCAATGACTACATTTGTCAGTACTGTGGTAGAGAGTTTCTGAGGGCTAATTCAATGAAGCGGCATATTCAAACAATGCATGTTGGCCGTACAATACAATGTCCTGTTTGTAACAAGAAATTAAAGGGACATTTGACTGAGCATATGCGCACACATGACAAGAAGCGTCCACATGAGTGTCCTGACTGTGGAAAACACTTTGCGCAATCCACTCAACTGAAGGTGCACCGTCGTGGCCATACTGGGTCTCGTCCTTATGTCTGCAGAATTTGTGAACGCCCATTTTCTCATTCAAACGCATTAATGTTGCATCTAAGACGTCACACTGGAGAAAAACCATTCCCCTGTGCGGAGTGCCCGATGTCCTTCTCTCAGCTACCACATATGAAGGCACACATGTCTAAGATTCATGGCAAGGAGAATCCATATAAATGTCTGAAATGTCAGGAAtacttcaaattaaaaaaagaccTTCTGATTCATAAGAAAAATTGTAGTGGTACTGGTATTGATTCTGATCTGTATGGAGACAAAGGGAGCTGTGGTGACTCTTCACAGGATGAGGATGGTGAATATGTTCCAGCAGAATCCACAATGACCTTGTCCCGAATGAGGTTCCTGCTAGCCCTTCTCCTCACGATGATTGCTAGCAAAGAAAAACTCAAGTATTTAGgGTTCAACAAGCGCCTTGTAGATGACTTGCTTGTTGAGTCATTGGAGGCTATGGACCAGACTCCTTGCAAGGATGAGTCTATATCGCCGCTTGTGCGTCTCAGGACTAACATAGAGACGCTGCTAAAAGGAACCGTACCAAAAGAACAGATGGAAAAATTCAGGAAAGAAAACAAGTCGACTGAAGAGTTGCTTGAGCTTCTTACAAGCGAGAAGGAGAAGTAA
Protein Sequence: MANVKRRVKAPKSALKTVSKKKQTDGRTKKGLKTLQATIEVESTEIESNIEDPDIVKKRKADDNLLFLTPDEKVKYFLQNGHNLKDSFEVTTTVKAGRAKQIKMSKTGPVSNTYELSNPVKTKSGRLKNSKFKYLNLVDNILQSEFGVIPGNKHKSTLKSAIASYNGVTNNNDTEITNQNNKTTSVNSKTSDRSKKNASRVVSTVTSNTAPVVKNISEKPKNNKHPFVLTHTTNEPKRSPTRGKDKLKKNQECEPSPTKTKQVALGNGVVLTLSLFECDYCNKTFNRKHSLVRHIYLHLGRKPHICPVCPKTFRILKNMKSHIDRDHCVQNVDETTETFSCDICDKPFLTKENLTLHLRSHIKGENTFKCIYCDKKFSYQLLLVQHEKKHLVTGKYQCTLCDMKYNSRDKLYVHVKSHLKLNDYICQYCGREFLRANSMKRHIQTMHVGRTIQCPVCNKKLKGHLTEHMRTHDKKRPHECPDCGKHFAQSTQLKVHRRGHTGSRPYVCRICERPFSHSNALMLHLRRHTGEKPFPCAECPMSFSQLPHMKAHMSKIHGKENPYKCLKCQEYFKLKKDLLIHKKNCSGTGIDSDLYGDKGSCGDSSQDEDGEYVPAESTMTLSRMRFLLALLLTMIASKEKLKYLGFNKRLVDDLLVESLEAMDQTPCKDESISPLVRLRTNIETLLKGTVPKEQMEKFRKENKSTEELLELLTSEKEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677899;
90% Identity: iTF_00282657;
80% Identity: -