Basic Information

Insect: Catocala nupta
Gene Symbol: -
Assembly: GCA_963675205.1
Location: OY776107.1:8142800-8146897[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.071 12 8.3 1.5 5 21 225 241 223 242 0.93

2 12 0.00074 0.13 14.5 3.0 2 23 259 280 258 280 0.97

3 12 9.8e-05 0.017 17.3 3.1 1 23 291 313 291 313 0.99

4 12 7e-05 0.012 17.8 2.9 1 23 321 344 321 344 0.96

5 12 2.9e-05 0.0051 18.9 1.2 1 23 350 372 350 372 0.98

6 12 0.0013 0.23 13.8 5.8 1 23 378 400 378 400 0.98

7 12 3.7e-07 6.5e-05 24.9 1.0 1 23 406 428 406 428 0.95

8 12 7.3e-06 0.0013 20.8 0.8 1 23 434 456 434 456 0.98

9 12 1e-06 0.00018 23.5 0.2 1 23 462 484 462 484 0.98

10 12 2.2e-05 0.0039 19.3 0.4 1 23 490 512 490 512 0.99

11 12 4.2e-05 0.0073 18.5 2.2 1 21 518 538 518 540 0.96

12 12 2.6e-06 0.00046 22.2 0.4 1 23 546 568 546 568 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.071	12	8.3	1.5	5	21	225	241	223	242	0.93
2	12	0.00074	0.13	14.5	3.0	2	23	259	280	258	280	0.97
3	12	9.8e-05	0.017	17.3	3.1	1	23	291	313	291	313	0.99
4	12	7e-05	0.012	17.8	2.9	1	23	321	344	321	344	0.96
5	12	2.9e-05	0.0051	18.9	1.2	1	23	350	372	350	372	0.98
6	12	0.0013	0.23	13.8	5.8	1	23	378	400	378	400	0.98
7	12	3.7e-07	6.5e-05	24.9	1.0	1	23	406	428	406	428	0.95
8	12	7.3e-06	0.0013	20.8	0.8	1	23	434	456	434	456	0.98
9	12	1e-06	0.00018	23.5	0.2	1	23	462	484	462	484	0.98
10	12	2.2e-05	0.0039	19.3	0.4	1	23	490	512	490	512	0.99
11	12	4.2e-05	0.0073	18.5	2.2	1	21	518	538	518	540	0.96
12	12	2.6e-06	0.00046	22.2	0.4	1	23	546	568	546	568	0.98

Sequence Information

Coding Sequence: atggaaATAAATGTGCAGTTGTTCGATAAAATATGCCGTGTTTGTCTGATACAATCTACCGAACTAAAATCTCTGTTTACAAAGTTAGATGGTGAGGAAAGgaatttatttcaaattcttTCTTTTACGGCCAATATAAACGTTAAAATCGAGGATAGTCTGCCGAAACAAGTTTGTAGTTCATGTGAATCTATTATGTGTAAGGCAGATGCGTTTAAACGCAGATGCCTGGAGTCTGAGacgattttaaataatgtttctcaAAGTGCAGCTACCAGTACCGAATCGTCGAATCTAGCCCCAGACTGCCCAATTAAAGATGAGAAAATCGATTTGAAACTGAAATTAATTGAGTACGGTACGCTACTGTCCCCGATTTCGAAAAACAGCGGTGATAAAGATGACTTTGatagtaaaaatattcaattactaGAATTGCCAGCTTGTTCCGCGAAAGACTCTGGTTTAAACGATTTACCTCCCAGTAAAACACTTGAAAATTGTGATCAGCCAGTTAAGGAGGAGGTTGTCAATAAGTTTGATGAGGACAACAACTTTTTGGATCATTTTGATGATGGTGGACAGTTGGATAATACACCTGTAGATGATGTGGAAAAGAAGCCTAAAAAGATTAAAGCCGAGAGTAAAAAAATAGGTATACGATATGAATGTTATTGCCATACACAGTTCACAACTAAAGAATCGTATAAATCTCATCTGAAACTAGATAAGTGTGATGCAGTTATGAGGTTTGGAAAGGACCTCAGCGATCTTCATTGTTCCAAATGTaataaacagtttaatacaataaatgcaTGGAAAGTGCATCAGCGTACTCACCGCAATGACAACACAAACACAGATGAAACATTCCAATGTTCATTCTGCTTacgtaagtttaaaaataagacATCTTTAGCTACACACATACAGAGGCATGAAGTaacagacaatattaaacatcaTTGTGAAATCTGTAAGagagaatttaaatataaagcatATTTAGAAAACCATATATTAACTGCCCATTCTAGAACTAATGAATTTACTTGTGATGTATGTGCGCAAAGTTTTTCAAGCAAAGATACATTGGAGACGCATAAAAAGAGTCATGAGAATGAAAAGAAACACCGTTGTACAGTTTGCAGCAAGGGATTCTATATGTTATGTACGTTGAAAGAACATATGCGGACACATACTGGTGAAAAGCCATTCTTGTGCTCTCAATGTGGAAAAGGATTTagtcaaaaaactaatttagcTCAGCATATGATGAGACATCAGGGTTTGAAGCCGTTTAAATGCGAGAATTGTGATAAAAGATTCGTATCAAAAGGCGAATTGGACGCTCACAACCGAAAACACAGCGGCGCACATCCCTTCGTTTGCGACGATTGTGGTAACGGGTTCACAACCTCCAGCGCTTTAGTCAAACACCGTCGAATACATACAGGTGAACGACCATACCAATGCGACTTATGCCCCATGAGATTCGCAGCCTCAGGGACTTTGAAGAACCATAGAAGGACTCATACCGGCGAAAGGCCGTTCCAGTGTTCTTACTGTGAAAAAGCTTTCGTGCAGAGGAATGATCTCATCTCTCATATAAGATGTCATACTGGCGAAAGGCCGTATATTTGTACGCAGTGTGGCCAGTCTTTTAGGAAGGCTAGTGGTTTGAAAAGTCATGTTAAGATACATATTAAGGATCCTGTGGTAGGGATTAACGCGATACTTACTGGTATGCATTGCCCTGAACAGTGA
Protein Sequence: MEINVQLFDKICRVCLIQSTELKSLFTKLDGEERNLFQILSFTANINVKIEDSLPKQVCSSCESIMCKADAFKRRCLESETILNNVSQSAATSTESSNLAPDCPIKDEKIDLKLKLIEYGTLLSPISKNSGDKDDFDSKNIQLLELPACSAKDSGLNDLPPSKTLENCDQPVKEEVVNKFDEDNNFLDHFDDGGQLDNTPVDDVEKKPKKIKAESKKIGIRYECYCHTQFTTKESYKSHLKLDKCDAVMRFGKDLSDLHCSKCNKQFNTINAWKVHQRTHRNDNTNTDETFQCSFCLRKFKNKTSLATHIQRHEVTDNIKHHCEICKREFKYKAYLENHILTAHSRTNEFTCDVCAQSFSSKDTLETHKKSHENEKKHRCTVCSKGFYMLCTLKEHMRTHTGEKPFLCSQCGKGFSQKTNLAQHMMRHQGLKPFKCENCDKRFVSKGELDAHNRKHSGAHPFVCDDCGNGFTTSSALVKHRRIHTGERPYQCDLCPMRFAASGTLKNHRRTHTGERPFQCSYCEKAFVQRNDLISHIRCHTGERPYICTQCGQSFRKASGLKSHVKIHIKDPVVGINAILTGMHCPEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00282642;
90% Identity: iTF_00282642;
80% Identity: -