Cnup013097.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala nupta
Gene Symbol
clz9
Assembly
GCA_963675205.1
Location
OY776083.1:28730433-28732910[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-08 6.8e-06 27.5 0.0 3 40 17 53 15 58 0.89

Sequence Information

Coding Sequence
atGGTTCGTACTTACCAAAGAAAAACCGAAAAGCCATCTTGGTCAAAAGAAACTTTATGTCGGGCAGTTGAAGCTGTCCGATCAGGCTTATCTGGGTATGAAGCAGCTAAAACATATAACATACCTCGTAAAACGATCATGGATCACGTGACGGGTCGAAGGGGCCAGAAATCATCTACACAAGGTAGACCACCAGCCTTATCGGCTGATATTGAAACAGAGTTAGCTAACTGTTTACATATAATGGAGAGGCATGGCTTCGGGTTAAGTCGAAAAGAGGTAATAGAACTGGTCGGCGAGTatgttaagaaaaacaaaataaatacaccaTTTACCAATGGCATCCCTGGAAACGATTGGTTTTCTAATTTTATGACTCAACATAGATTGTCAATAAAAAAACCTCAAGCAGTTGAGATTGCCCGTAAGAAAGCGGCTGACCCATTCATTATACAAGAATTTTACGACATTGTCGAAAAAGTTATTAATGAACTAGAGCTTGAAAACAAACCAGagagaatttataatattgacgaAACAAGCTATTGCAGTGACCCTAAAAAAACCAAAGTGGTCGGCTTAAAGGGTTATCCTTCAACTAGAACAACATCGTCAGCCGGTAAAGCAAACACAACCGTCTTGGTTGCCAGCAATGCAGCTGGAGGCAAAGGGCCtccatttataattttcaaaggTAAGCATGTGTGGAGTACATGGACGTCTGAGGAAGCATATCCTGGCACTTTGTATACTGCGACATCCAATGGTTGGATTGAATCCGACGCTTTTGCAGAGTTCATGACAAAAAGTTTCATTCCTATGGTCAAAGATGAGAAAGAGCCAACGCTCCTAATTTATGATGGTCATAGCACTCACGTGCAACTGGCTGTGGTcgaaaaagcaaaacaaaataatatcaccATCATAAAATTACCACCGCACTCAAGCCACCTGCTTCAACCACTTGATCTAAGCGTATTCAAACCGTATAAAGACGCCTGGGACCAGGAAATGGTTAAATGGCAGCGCACACATAAGGGCGAAAAGTTACCTAAAGAACAGTTTTCAGCGATAGTGGGAAGAGTTTGGCAAAATATTAattccaatattataaagaagggGTTCGAAAAAAGCGGAATCTATCCGTTTAACAGAAATGCTGTACCGGAACATAAACTAGACCCAGAGGCCCTAAAAAGATGGAAAAAGCaccatgaaaatttattgaaagaaCAAACACTCGCTTGTAGCTCTCCATTAACCTTAACCAAATTATGCCTGAataaaattaactgttttattaaattaaactcgACTACAGTTACCATTTTGCCAAATGTCCTTAGTTCTAAGTCTTTAGAGAAAACATCTTTCGAAGATTTATTAATACAATCTACAAAACAGTCGCAGACTGCCAATGTCAAGAGAAAGAAAGTAAAAATTTCCGCAAGTGCAGAGGTGATAACGTATCAGGAAGTCATTGAAAGATTGAAACAGAAAGAAGAGGATAAAGCCAAAAAAGaacaagaaaaagaagaaaaacgAAAGCAACGAGagcaaaaaaagaaagatgtaataagtaaacaaaataaaaaaaaagaaaaagtgaaGCAAAGTCAGGAAAAGAGTAAAAACATAAGActgacaaaaaacaaacaacatattACTGATCCACCAAGGTCGGAAGCAATTCTTTCTGAAATAATACCACCTAATATAGACTTGAACGTCTGTGAACCAATTTATCTGTTACAAAACGATTCTTCAATACTTAGTTGTCTTGCCAGCTCCTCAAAATCACCACTGCCACTGACTTCAAAACCAAAAGTTACTATTTTAGAAGACAGATATTTAAAAGTTGATGAAAAACTGACCAAAGATGTTTTTacaggatataaaattaaacgacCAACAGACTTTACGTTACAGGTTACTGATGAAATACAcactgttaaaaaaataaaaaatgaaagacaaaacatcaaaataaaaaggaCAAAAAAGCAAAAGAAAACTATGAAAGAAGAAGATTTAGAAGAAGACAGTGACTTTACGATTCATGATTCAGATGCTTCAGATATGGACCTAGAAAGTTACCGTAATATTTACTTATCAGAACATAACTCAGATGAAGAAAACGTATGTATAGATTTTGGGCTCACCGATATAGAGTATTTTGAAGAGGCATCAAACAAATTAAAGGAAGGCGATTGGGTTCTAGTCAAGTTTTCGGCAAAAAAAAGTGTAAAGCATTATGTTGggcaaattattagtattaatgaTGACATTCCAATGATAAAATACGTacgaaaaatacaaacaaaacaaaaaggtttGCTTTTTGTCTATCCTAATGTGGACGACATATGTGAATTGAGACATGTTGCAGATATTGTGTCAGTTTTGCCGAAACCCACGATAACACGTCGTGGTCAAATATCATTCAGTATTAATAtcggtaaatttaatttacagtaa
Protein Sequence
MVRTYQRKTEKPSWSKETLCRAVEAVRSGLSGYEAAKTYNIPRKTIMDHVTGRRGQKSSTQGRPPALSADIETELANCLHIMERHGFGLSRKEVIELVGEYVKKNKINTPFTNGIPGNDWFSNFMTQHRLSIKKPQAVEIARKKAADPFIIQEFYDIVEKVINELELENKPERIYNIDETSYCSDPKKTKVVGLKGYPSTRTTSSAGKANTTVLVASNAAGGKGPPFIIFKGKHVWSTWTSEEAYPGTLYTATSNGWIESDAFAEFMTKSFIPMVKDEKEPTLLIYDGHSTHVQLAVVEKAKQNNITIIKLPPHSSHLLQPLDLSVFKPYKDAWDQEMVKWQRTHKGEKLPKEQFSAIVGRVWQNINSNIIKKGFEKSGIYPFNRNAVPEHKLDPEALKRWKKHHENLLKEQTLACSSPLTLTKLCLNKINCFIKLNSTTVTILPNVLSSKSLEKTSFEDLLIQSTKQSQTANVKRKKVKISASAEVITYQEVIERLKQKEEDKAKKEQEKEEKRKQREQKKKDVISKQNKKKEKVKQSQEKSKNIRLTKNKQHITDPPRSEAILSEIIPPNIDLNVCEPIYLLQNDSSILSCLASSSKSPLPLTSKPKVTILEDRYLKVDEKLTKDVFTGYKIKRPTDFTLQVTDEIHTVKKIKNERQNIKIKRTKKQKKTMKEEDLEEDSDFTIHDSDASDMDLESYRNIYLSEHNSDEENVCIDFGLTDIEYFEEASNKLKEGDWVLVKFSAKKSVKHYVGQIISINDDIPMIKYVRKIQTKQKGLLFVYPNVDDICELRHVADIVSVLPKPTITRRGQISFSINIGKFNLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00001115;
90% Identity
iTF_00281147;
80% Identity
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