Cnup055755.2
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- -
- Assembly
- GCA_963675205.1
- Location
- OY776107.1:18272069-18274234[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-08 4.5e-06 28.0 0.0 1 40 14 52 14 56 0.87
Sequence Information
- Coding Sequence
- atGCCGCGTCAAAAGAAAGACCGTTCTATTGGAAAGCATACAGAAGAAGCCATGAAATCAGCACTACTTATGATTGATGGGGGCATGTCTATAAGAAAAGCTGCAAAGGACTGTCAAATCCCTTATCCTACACTCCATCGCTATGCAGCGAGAAGAAAAGAAAGAGGCGAAGACATGTCATTAGTCCCTAGgtatgatataaacaaaatatttactgaaGAACAAGAagaaatactattaaaatattataaggatTGCGCTCTTATGTTTTATGGCCTTTCAGTGAAAGGATGTAGGAAAGTAGCGTATGAGATGGCAaagataaataacattaaaaaacctGATTCATGGGAAAGGGATAATTTAGCAGGATTGGAGTGGTTTCGTTTTTTTAAGAAACGGCACCCTAATGTTTCTGTAAGAAAACCCGAAGCTGTGAGCCTGGCACGAGCGACCTCTTTCAATGCAGAAAATGTAGGACATTTTTTCAAGAATTTGGAAACTGTGCTTAAAAGAGAACCGAAATTTGCAGATGGCACTCGCATATTCAACTTAGATGAGACAAGTACTACAACTGTACAAAAACCGCAAAAGATTGTAGCACCAAGAGGAACTAATGTGGGAAAAGTCAAAAGCGGAGAAAAAGGCACGCTGGTGACTACATGTTGTATAGTGAGTGCGAGTGGTTATGCGTTACCACCTGCAATTATTTTTCCCAGAAAGAACTGTAAAACTATTATGTGTCACGGGGCACCTGCAGGTAGTTTAGGCTTAGCTAATCCTTCTGGATGGATGACTTCGGAGCTATTCGTGCAAGTAATGAGACATTTCATCAAACATTCGTCAACTACACCTGAGAATCCTTCATTGCTCGTCATGGATAATCATGAGTCTCATTTATCTATTGAGGCTCTAAACTTAGCCAAAGCGTCTGGAATAACTGTCTTGACATTACATCCACACACAACAAATAAGCTACAGCCACTAGATGTGGGATTGATGAACCCTTTCAAGACTTACTATTACTCAGCACTGGAGGCATGGATGCTTCAAAATCCAGGGAAACCTGTCTCAATATACGAAATCGCTGGATTCGTTGGGCGTGCTTATCCTCGAGCTATGACGCCACTAAACATAGCTGCCGCATTTGCCAAATGTGGAATTTTCCCTTATAATAAGGACATATTTACAGAAGAAGATTACATGCCCAGTAGCATCACAGATCGTGCTAATCCATATGAAAATCCTCCATTGATAATCCCAACCACCAGCTCACACCTTTTACCAGAATCGACAGCTCAAGTAAACAGTGTTGCAACAGTTGAACAACGCCCAGATTCAATAACCCCCacactatttgaattattagaaaGTAATGATGATGATGCGGCCAGAGATAGTTCGTTAAGCCCATCAATACTCTCTCAAGAAAACATTGCACCTGAGTCCCAAGTTGTTGATATGTCTTTGATAATTGATAGACAATCCCCAAAATGTAATGAACATGCTCCAAGCTCCAGCCAACTGAATTCAGGTTACAGTCAACAGACTTCTGGCTCCAATCAAGTGGTTACGAGCCCTAATAAACAAGGAAGTTCAAAACGAATGATTATTACACCACAGATGTTTCGAGCACCTCTGAAAGCTGGACCGCGGTCTGATAAAAGGAAACGTAGGAAACTTGGCAAGAGTATGATAGCTACAGACACACCGGAAAAAGATACCATTGCTGCACAACGGGCTGCTGTAAAAATCAAGAAAGAACCACATAAAAGAAAAATCCTTCAAGAATCTTCAAAACCTAACCTACCTTCATCTAGCAAACCTCGAAAACCAAAAAGGCCAAGTAAACAGGATAGTTCAGAAAGTGAAGATTCAGAAGATCAAATGGTTATTGGAAGTGATACAGATGCAGAATCATACTTGGAAGAAGATACAGGAGAGGATACAGGAGAAACTATGGTAAAGGAACCTTTTCCACCGTTGCCGCGTCTACCTAAGACTGATGACTTTGTTCTTGTATTATTTCAATGTAAGAAACGAGCAATTTACTACATAGCTAAAATTTTGGATGATTGTGACGAGGAAGAAGAATATTgtgtttcatttttaaatctgaaaataaaaataggcaaGAATTTATGTTTCCATTCGAACCTGATCTAG
- Protein Sequence
- MPRQKKDRSIGKHTEEAMKSALLMIDGGMSIRKAAKDCQIPYPTLHRYAARRKERGEDMSLVPRYDINKIFTEEQEEILLKYYKDCALMFYGLSVKGCRKVAYEMAKINNIKKPDSWERDNLAGLEWFRFFKKRHPNVSVRKPEAVSLARATSFNAENVGHFFKNLETVLKREPKFADGTRIFNLDETSTTTVQKPQKIVAPRGTNVGKVKSGEKGTLVTTCCIVSASGYALPPAIIFPRKNCKTIMCHGAPAGSLGLANPSGWMTSELFVQVMRHFIKHSSTTPENPSLLVMDNHESHLSIEALNLAKASGITVLTLHPHTTNKLQPLDVGLMNPFKTYYYSALEAWMLQNPGKPVSIYEIAGFVGRAYPRAMTPLNIAAAFAKCGIFPYNKDIFTEEDYMPSSITDRANPYENPPLIIPTTSSHLLPESTAQVNSVATVEQRPDSITPTLFELLESNDDDAARDSSLSPSILSQENIAPESQVVDMSLIIDRQSPKCNEHAPSSSQLNSGYSQQTSGSNQVVTSPNKQGSSKRMIITPQMFRAPLKAGPRSDKRKRRKLGKSMIATDTPEKDTIAAQRAAVKIKKEPHKRKILQESSKPNLPSSSKPRKPKRPSKQDSSESEDSEDQMVIGSDTDAESYLEEDTGEDTGETMVKEPFPPLPRLPKTDDFVLVLFQCKKRAIYYIAKILDDCDEEEEYCVSFLNLKIKIGKNLCFHSNLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282250;
- 90% Identity
- iTF_00282250;
- 80% Identity
- -