Cnup050141.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Catocala nupta
Gene Symbol
P
Assembly
GCA_963675205.1
Location
OY776105.1:6743608-6748955[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-10 1.9e-07 32.4 0.0 1 43 10 53 10 55 0.84

Sequence Information

Coding Sequence
ATGCCGAAGGCACCGAAAGTAAAATATACTCAGGAAAGCCTTCAGAAAGCCATCGCTGAAGTTCAAAATAATGAACAGCAATTGTCAGATCGGCAAATTGCACAAAAATATGGTGTTCCGAGATCCACGCTTAGGTTTTACAAACGTAACCCAGGACACAAAACCAGCCTGGGTCCTTCGACAATTTTAACTCCGAATGAGGAAGCTATTCTTGAAGAGTGGATTATAACTTCAGCTCGAAAAGGATTTccaaagaataaagaaaatataatagacaGCGTACATAAGTTTCTTGTGGAGAATCCAAGACCTAACCCATTTTCCAATAACAGGCCAGGCATTGGGTGGTggaaagcttttttaaaaagacacccTAAATTAAGTATCAGGGCTTCTGAAGGTGTAACAAAAGCTAGCTCATGCGTGTCTGAGAAAGATATAAGAGGATGGTTTGATGAGATTCATGCGTATGCTGAAGAAAAAGGACTGACTGAGGTTCTCAACCAACCAAGTAGAGTTTTTAATGCAGACGAGACTAATTTTCAAATTTGCTTAAGTTCTGGACTTGTTGTGGCTGAGAAAGgatctaaaaatgtttataatattgaacaCTCAAGCGCAAAAGAATCCATAACTGCCTTATTCACGTTTTCGGCTGCCGGTGACGTCTGCTGCCCATTTATTGTGTACCCGTATCAAAGACTACCTGAAAAGATATGCGAGTCTTTACCAGAAGGGTGGGGTATAGGTAAATCAGACAATGGTTGGATGACTACCGAAGTATTTTACGAATTCATCGCAAATGTTTTTCACCCTTACTTAGTAAAGAAGGCTGTTCAGTTCCCAGTCATCTTATATGTTGATGGtcataaaacacatttaaattatcatttaagcCAATTATGCACGCATCTTCAAATTGAGTTGATAGCTTTATACCCTAATGCAACGAGAATAATTCAGCCAGCTGACGTATCTGCTTTTAGACCCTTAAAAATAGGTTGGAGaagatatttaaagaaatggcaACTAACAAATCAAAATAAGGGCATAACAAAGCTAAATTTTGCTcctattttaaatacagttttagAAGAAAGTCTACGACCAGAAATATTGGTAAATGGGTTCAGAGCATGTGGTCTGTGTCCGTTTAATGCAAATTCTATTGATTACTCTAAATGTTTAGGAAAAACTGCTGATTGCCAAAGAGATTTAGATAAAGATATTTCAGATAATGTCTCTATTACATACAAAACCTTTAAAGATATAACTGGAGCGTCTCTTTGCCAAAAATTTAAAGACCAGTCATTTCATACAACAGAACCTcacttgaacataatttataatctcTGGAAACAATTTCAAAACAATGCTGACATAGCTAATACCTCTAATAAACCATCAACAAATCAAGCTGAAACCTCTTCtccattaataaatttaacagaaGTATTGGATGAAGTGCAAGTTGAGAACCAAGTCAAAGATCCTCCAATAGAAGTAGACAGTCTGCCAAATACCTCCTTAAGTGACCAAATTCCCTACTACCTACATTGTCTCCCTGGAACATCTAAATCTGATGACCATTTTGAAATCCAAAGTCAATCCAGCCAATCTGAATCTGCTACCTTAACCACTATGATTGAGAGTCCAAAgttggttaaaataaaatcctcCTTTGGAGAATACCTGGCATATCCAAAAACACCCATAAGGAAAGGAAAGCGTCAAATAGAGAGGCAACCGTTTGCTATAACATCAGATAGTTTTAAATTAGGACTGCAAAAAAAACAGTCTGACAAAGAAAATCTgttaaaagaaaaggaaaagaaGAAAATTGAGAGAGAGATGAAGAAGACTGAAAAGAGTAAGAAAGAACTAAGTAAGGGTAAAACCAAAGCTCAAAGTACAAAAGAAGTTATGACTAATTATGTTGAAAATAATAGCAGTATCATTCCAGAATCTAAAAAAATCACTATCTTAGAAGAAATTCACATGAAACCCATGAGTTTAAACCTACAAGCGGCTCTGCTTCGCAAGCAGGACCAAGTAAGACTGCACGCCACCCCCCGCAGGGGTCGGCTCACTATCATGGACCCTCGCAGGGTACCAGCCATGGATACTGCACCTCTGTGCCTCATCCACATTATCAATACCGCCAGTCCTCGCAGGACTGCTATCATGAACGCCCTCAGCGACAGAGCAACCAGAGTGACCGTCGCACGGCGCCTACAAGCAACAACAGAGGGTCATTTCGCTCGCGGGGTGGCCGCCAAAGCTACAAGCCTCAGAGTCAGGGCAAAGGAAACCGTAAACGCCCCGGAGTCTCCTCAGACTACAACTCTGGGAACAAAAACCGTAAGTACTGACTCGACAGAATTCAGGGCGGGTCAACTAGCACTATTTTACAATCGATGGGAGGAAATGGGAGCTCCAAACTTTCTGTTGCGCATAATAACAGGGTATCGCATACCCTTTCTTCTAAAACCACCTCTAATATTGCCACATTTGAGGAAAGAGCCCTACATCACACAGGAGTCCGAATCGATGTCGGCACTCATCAGTCAGATGAAAGACCAAGGTGTATTAGAAGCAGTGCGACGCTCCCCGAGCTTCCTGTCAACAATGTTTCTTGTGCCAAAGAGCGATGGCTCCGACCGCCCAATATTCAACTTAAGAGCTTTAAACGATTATGTAATCACGGAACCCTTCAGCCTGATAAATGTATTTCGTATACCCGAGTTCCTCCAGCCAGGCGACTGGCTTTGCAAAGTAGACCTTTCGCAAGCTTACTTTCATTTGCCAATATCTCCGGCACACAGAAGATTTTTGCGCCTCATTCACCAAGGGGAGCTATTAGAAATGACCTGCTTACCTTTTGGCCTCAGTACAGCACCGAAGGTGTTTGCTTCTCTGAGCAACTGGGTTGCTCAAACATTGCGAGAACAGAATCTGCGCATAATTGTGTACTTAGACGACTTCCTGGTAGTTCACCAGGACAAGGACACTTTGCAAACTCATGTTCGCACTCTCCTGAACCGTCTAGAATATCTAGGGTGGCAAGTAAATCTAAAGAAATCCGTTGTATCCCCACAAAAGAGTCTTGTGTATCTGGGAGTTCAGTGGGATccttgggccaacaaaaagtctcTGCCGCAAGTCAAGGTCAGAAATCTTATCGACAAGGTCTCTGCAAGGCTGAACTCAGGCAAGGCTTGCCTGCAAGAATTACAAAGCCTAGTGGGCCTTCTAAACTTTGCAAGTTTTGTGGTGCCACAGGGCAGACTACATCACCGGTCTCTGCTCAGCCTCCTAAATGCATCTCTAAATATGCCAGTCAGGAAGGAGATCCACCTACCAGACGAAGTCCTAGAAGATCTTCAGTGGTGGCTTCACAACTGCCACCAAACATCTGCAATCCATCTACCACCACCAACTCACTTTGTGACCACAGACGCCTCCGATCTGGCTTGGGGAGCTCAGGTGGACGGTTACGCAGTGTCAGGTGTGTGGACTGCTCAAGAACAACATCTACATTGCAACCTAAAAGAGATGCTGGCAATCTTAAAGGTGCTCGAAACCCACGGTCCTCTACTGTGCAAGTCCACTGCCCTGTTCCAGTGCGACAATCGAACAGTTGTGGCCCACTTGCGGAACGAGGGCGGCACGAGATCGCCACCTCTGATGGAAGTAACGTACAGAGTGTTCCGCTTACTAGATTGTCATCAAATAAATCTGACAGTCAATTATATACCCGGCATTTACAACGGACATGCGGATCACCTCTCCAGGCACAAGCTAGTACCAGAATGGCATCTTCTGCCCGCTTGCACGGAGAAGATATTTCACAAGTTTGGCACTCCGGTAGTAGATCTATTTGCGTCCAGTCGAGCAAACGTGGTAGCCAACTACGTGTCTCTGGATTTAACAGATACCCAAGCGTTATTCCACAATGCCTTTTCCCGGCAGTGGAACTACCACCTTGCGTGGGTGTTCCCACCACCATACCTGATACCCAAGGTGCTGGCCCACCTCAACTCGGCGACCGGGCTGTACCTTTTAATTGTCCCCCGGTGGTGTCGGGTATTCTGGCGGGCCGATCTCAAAGCTCGAGCAGTAGCAGCTCCGTGGTCGATCACCAATCTCAGGGAGAATCTAATAGACACCACAACCGGTCGGCCACCCCCCAAGGTTCAAGAGATGGCGCTCGAGGTCTGGAAGTGTGGGGATGGTCGAAGAGTTTGA
Protein Sequence
MPKAPKVKYTQESLQKAIAEVQNNEQQLSDRQIAQKYGVPRSTLRFYKRNPGHKTSLGPSTILTPNEEAILEEWIITSARKGFPKNKENIIDSVHKFLVENPRPNPFSNNRPGIGWWKAFLKRHPKLSIRASEGVTKASSCVSEKDIRGWFDEIHAYAEEKGLTEVLNQPSRVFNADETNFQICLSSGLVVAEKGSKNVYNIEHSSAKESITALFTFSAAGDVCCPFIVYPYQRLPEKICESLPEGWGIGKSDNGWMTTEVFYEFIANVFHPYLVKKAVQFPVILYVDGHKTHLNYHLSQLCTHLQIELIALYPNATRIIQPADVSAFRPLKIGWRRYLKKWQLTNQNKGITKLNFAPILNTVLEESLRPEILVNGFRACGLCPFNANSIDYSKCLGKTADCQRDLDKDISDNVSITYKTFKDITGASLCQKFKDQSFHTTEPHLNIIYNLWKQFQNNADIANTSNKPSTNQAETSSPLINLTEVLDEVQVENQVKDPPIEVDSLPNTSLSDQIPYYLHCLPGTSKSDDHFEIQSQSSQSESATLTTMIESPKLVKIKSSFGEYLAYPKTPIRKGKRQIERQPFAITSDSFKLGLQKKQSDKENLLKEKEKKKIEREMKKTEKSKKELSKGKTKAQSTKEVMTNYVENNSSIIPESKKITILEEIHMKPMSLNLQAALLRKQDQVRLHATPRRGRLTIMDPRRVPAMDTAPLCLIHIINTASPRRTAIMNALSDRATRVTVARRLQATTEGHFARGVAAKATSLRVRAKETVNAPESPQTTTLGTKTVSTDSTEFRAGQLALFYNRWEEMGAPNFLLRIITGYRIPFLLKPPLILPHLRKEPYITQESESMSALISQMKDQGVLEAVRRSPSFLSTMFLVPKSDGSDRPIFNLRALNDYVITEPFSLINVFRIPEFLQPGDWLCKVDLSQAYFHLPISPAHRRFLRLIHQGELLEMTCLPFGLSTAPKVFASLSNWVAQTLREQNLRIIVYLDDFLVVHQDKDTLQTHVRTLLNRLEYLGWQVNLKKSVVSPQKSLVYLGVQWDPWANKKSLPQVKVRNLIDKVSARLNSGKACLQELQSLVGLLNFASFVVPQGRLHHRSLLSLLNASLNMPVRKEIHLPDEVLEDLQWWLHNCHQTSAIHLPPPTHFVTTDASDLAWGAQVDGYAVSGVWTAQEQHLHCNLKEMLAILKVLETHGPLLCKSTALFQCDNRTVVAHLRNEGGTRSPPLMEVTYRVFRLLDCHQINLTVNYIPGIYNGHADHLSRHKLVPEWHLLPACTEKIFHKFGTPVVDLFASSRANVVANYVSLDLTDTQALFHNAFSRQWNYHLAWVFPPPYLIPKVLAHLNSATGLYLLIVPRWCRVFWRADLKARAVAAPWSITNLRENLIDTTTGRPPPKVQEMALEVWKCGDGRRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-