Cnup012531.1
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- -
- Assembly
- GCA_963675205.1
- Location
- OY776083.1:18544888-18546882[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-10 7.9e-08 33.7 0.0 1 43 10 53 10 55 0.84
Sequence Information
- Coding Sequence
- ATGCCGAAGGCACCGAAAGTAAAATATACTCAGGAAAGCCTTCAGAAAGCCATCGCTGAAGTTCAAAATAATGAACAGCAATTGTCAGATCGGCAAATTGCACAAAAATATGGTGTTCCGAGATCCACGCTTAGGTTTTACAAACGTAACCCAGGACACAAAACCAGCCTGGGTCCTTCGACAATTTTAACTCCGAATGAGGAAGCTATTCTTGAAGAGTGGATTATAACTTCAGCTCGAAAAGGATTTccaaagaataaagaaaatataatagacaGCGTACATAAGTTTCTTGTGGAGAATCCAAGACCTAACCCATTTTCCAATAACAGGCCAGGCATTGGGTGGTggaaagcttttttaaaaagacacccTAAATTAAGTATCAGGGCTTCTGAAGGTGTAACAAAAGCTAGCTCATGCGTGTCTGAGAAAGATATAAGAGGATGGTTTGATGAGATTCATGCGTATGCTGAAGAAAAAGGACTGACTGAGGTTCTCAACCAACCAAGTAGAGTTTTTAATGCAGACGAGACTAATTTTCAAATTTGCTTAAGTTCTGGACTTGTTGTGGCTGAGAAAGgatctaaaaatgtttataatattgaacaCTCAAGCGCAAAAGAATCCATAACTGCCTTATTCACGTTTTCGGCTGCCGGTGACGTCTGCTGCCCATTTATTGTGTACCCGTATCAAAGACTACCTGAAAAGATATGCGAGTCTTTACCAGAAGGGTGGGGTATAGGTAAATCAGACAATGGTTGGATGACTACCGAAGTATTTTACGAATTCATCGCAAATGTTTTTCACCCTTACTTAGTAAAGAAGGCTGTTCAGTTCCCAGTCATCTTATATGTTGATGGtcataaaacacatttaaattatcatttaagcCAATTATGCACGCATCTTCAAATTGAGTTGATAGCTTTATACCCTAATGCAACGAGAATAATTCAGCCAGCTGACGTATCTGCTTTTAGACCCTTAAAAATAGGTTGGAGaagatatttaaagaaatggcaACTAACAAATCAAAATAAGGGCATAACAAAGCTAAATTTTGCTcctattttaaatacagttttagAAGAAAGTCTACGACCAGAAATATTGGTAAATGGGTTCAGAGCATGTGGTCTGTGTCCGTTTAATGCAAATTCTATTGATTACTCTAAATGTTTAGGAGAAACTGCTGATTGCCAAAGAGATTTAGATAAAGATATTTCAGATAATGTCTCTATTACATACAAAACCTTTAAAGATATAACTGGAGCGTCTCTTTGCCAAAAATTTAAAGACCAGTCATTTCATACAACAGAACCTcacttgaacataatttataatctcTGGAAACAATTTCAAAACAATGCTGACATAGCTAATACCTCTAATAAACCATCAACAAATCAAGCTGAAACCTCTTCtccattaataaatttaacagaaGTATTGGATGAAGTGCAAGTTGAGAACCAAGTCAAAGATCCTCCAATAGAAGTAGACAGTCTGCCAAATACCTCCTTAAGTGACCAAATTCCCTACTACCTACATTGTCTCCCTGGAACATCTAAATCTGATGACCATTTTGAAATCCAAAGTCAATCCAGCCAATCTGAATCTGCTACCTTAACCACTATGATTGAGAGTCCAAAgttggttaaaataaaatcctcCTTTGGAGAATACCTGGCATATCCAAAAACACCCATAAGGAAAGGAAAGCGTCAAATAGAGAGGCAACCGTTTGCTATAACATCAGATAGTTTTAAATTAGGACTGCAAAAAAAACAGTCTGACAAAGAAAATCTgttaaaagaaaaggaaaagaaGAAAATTGAGAGAGAGATGAAGAAGACTGAAAAGAGTAAGAAAGAACTAAGTAAGGGTAAAACCAAAGCTCAAAGTACAAAAGAAGTTATGACTAATTATGTTGAAAGTAATAGCAGTATCATTCCAGAATCTAAAAAAATCACTATCTTACTACACTAG
- Protein Sequence
- MPKAPKVKYTQESLQKAIAEVQNNEQQLSDRQIAQKYGVPRSTLRFYKRNPGHKTSLGPSTILTPNEEAILEEWIITSARKGFPKNKENIIDSVHKFLVENPRPNPFSNNRPGIGWWKAFLKRHPKLSIRASEGVTKASSCVSEKDIRGWFDEIHAYAEEKGLTEVLNQPSRVFNADETNFQICLSSGLVVAEKGSKNVYNIEHSSAKESITALFTFSAAGDVCCPFIVYPYQRLPEKICESLPEGWGIGKSDNGWMTTEVFYEFIANVFHPYLVKKAVQFPVILYVDGHKTHLNYHLSQLCTHLQIELIALYPNATRIIQPADVSAFRPLKIGWRRYLKKWQLTNQNKGITKLNFAPILNTVLEESLRPEILVNGFRACGLCPFNANSIDYSKCLGETADCQRDLDKDISDNVSITYKTFKDITGASLCQKFKDQSFHTTEPHLNIIYNLWKQFQNNADIANTSNKPSTNQAETSSPLINLTEVLDEVQVENQVKDPPIEVDSLPNTSLSDQIPYYLHCLPGTSKSDDHFEIQSQSSQSESATLTTMIESPKLVKIKSSFGEYLAYPKTPIRKGKRQIERQPFAITSDSFKLGLQKKQSDKENLLKEKEKKKIEREMKKTEKSKKELSKGKTKAQSTKEVMTNYVESNSSIIPESKKITILLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281089;
- 90% Identity
- iTF_00281089; iTF_00281090; iTF_00281091; iTF_00281092; iTF_00281093; iTF_00281077; iTF_00282209;
- 80% Identity
- -