Cnup028405.1
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- TIGD6
- Assembly
- GCA_963675205.1
- Location
- OY776092.1:1988939-1990789[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-10 8.3e-08 33.6 0.0 2 40 11 49 10 54 0.92
Sequence Information
- Coding Sequence
- atgtcaaaaagaaaatataatacttgGAGTAAAGAAAATATGGAAGAAgcgattaaaaaatataatgaagggTCTTTACAATTTAACGAAGCTTGTCGTATATATAATGTACCAAAACCAACATTTAGACGACATTTAAAGGGGCTAAACTTGCATCAAAGAATTGGACGTCCAAAGGATTTAACTGATGAAATGGAAAAAGAACTGGTCAGACATGTATTGCTGTTGGAATCTAGATTTTTTGGCCTGACTATAACAGATTTACGGCGCCTAGCTTACCAGTTAGCAGAAAAATACGGGTTGAAACATAGATTCAATAATGAATCACAATTGGCTGGATGGAAatggtattataaatttatgaaaaatcaCCCAGAAATATCCCTACGAACTCCAGAACCAACATCCATGGCTCGTTGCAAAGGATTCAACAAAGAAACAGTTATGGCATTCTTCGACAAATATGAATCAATCTTAGATGCAAGTAAATTTACACCTGACAAAATTTATAACATGGACGAAACTGGGTTGAGCACGGTACATAAACCTTCGAAAATTTTGGCTCGAAAAGGTAAGCACCAAGTTGGAGCTGTTACTAGTGGTGAACGTGGTATCAACACTACATGCATTTGCTGTATGAACGCTGCTGGAGAATTCGTGCCACCCATGCTCATATTTAAGCGTAAAAGAATGACAGATGATTTAAAGCGAGGTGGGCCACCAAATACATTGTACGATTGTTCCGAAAGCGGATGGATTTTAAGTTGCCTTTTTGTCAAATGGCTCGAACATTTTATAAAGTGTCTGAGATTGCAAAAATTACAGAAATGTCAAGTTCTTCTTATTTTAGACGGTCATTCGACGCACACTAAAAACTTGGATGCAATTAATCTTGCAAGACAATACGGGATAATTATGCTCTCTCTGCCAGCACACACCACTCACAAGTTGCAACCACTGGACAGATCATTCTTCAAATCGCTAAAGCAGAATTTTAGTGCTTCTTGCGCTTCATGGATGCGAAACCATCCTGGTTCCCTAATAAAGCAAGCGAACATTGCAGAAATTTTGGGAGAGGCATATCCTCGAGCCGTTTGTATGGACACAGGTATGCATGGCTTCGAGTCGTGCGGATTATGGCCTTGCAATCGTTCCAAGATCAGGGATGAAGAATACGTTGTTCTTGATGAAGATGCCAATCCAAATGATTTAGAGGATGTCTCCCAAAGACAGGAAGAACAAAAAGACACTTTGACAACATGTCAACGTGTGCAACAATTAAATCAGTCTAATAAGCAAGAACAGATTGAAGTAGCTGAGAATCCAAATCTTCCTGAGACAGCTGGCCATTTAGATATACAGCAAGATCAATGTCTAGCAGATAAAACGAAGGAATGTTCTTTAGAGTCACAAGCGAATATTTCTAATACAAAGACTGTTAGAGCGATACTGGAAACGATATCTCCATTGCGTGCTATTCCTGGCAATTCAAAAACTTTAAAACGAAAAACTACAAgtgctattattattacagaaagTCCTTATAAAAAAGAGGTCGAGAATAAAATAGAAGAATctaagaagaagaatatatCAAAGAACCTTGGTGCAAAGATGAATAAAACTACTAAAACAACACAAAATgttaataagaaaaagaaacaaaaaaaagatgAAAATGATAGTTGGTACTGTAAATTATGCCAAGAAGATCGAAAAGAAAGTATGATTAAGTGCACACAATGTGAGGAATGGGCACATGAACTTTGCGCAGGAACCAATAAAAAAACCAAAGATTACAACTGTGATGATTGTAAAGAATTGGCGAAGACCATCCGCAGAATTTGCTAA
- Protein Sequence
- MSKRKYNTWSKENMEEAIKKYNEGSLQFNEACRIYNVPKPTFRRHLKGLNLHQRIGRPKDLTDEMEKELVRHVLLLESRFFGLTITDLRRLAYQLAEKYGLKHRFNNESQLAGWKWYYKFMKNHPEISLRTPEPTSMARCKGFNKETVMAFFDKYESILDASKFTPDKIYNMDETGLSTVHKPSKILARKGKHQVGAVTSGERGINTTCICCMNAAGEFVPPMLIFKRKRMTDDLKRGGPPNTLYDCSESGWILSCLFVKWLEHFIKCLRLQKLQKCQVLLILDGHSTHTKNLDAINLARQYGIIMLSLPAHTTHKLQPLDRSFFKSLKQNFSASCASWMRNHPGSLIKQANIAEILGEAYPRAVCMDTGMHGFESCGLWPCNRSKIRDEEYVVLDEDANPNDLEDVSQRQEEQKDTLTTCQRVQQLNQSNKQEQIEVAENPNLPETAGHLDIQQDQCLADKTKECSLESQANISNTKTVRAILETISPLRAIPGNSKTLKRKTTSAIIITESPYKKEVENKIEESKKKNISKNLGAKMNKTTKTTQNVNKKKKQKKDENDSWYCKLCQEDRKESMIKCTQCEEWAHELCAGTNKKTKDYNCDDCKELAKTIRRIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00281088;
- 90% Identity
- iTF_00281088;
- 80% Identity
- -