Cnup003839.1
Basic Information
- Insect
- Catocala nupta
- Gene Symbol
- -
- Assembly
- GCA_963675205.1
- Location
- OY776079.1:7780756-7795046[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-10 1.8e-07 32.5 0.0 3 37 294 328 292 334 0.94 2 2 3.4e-10 1.3e-07 33.0 0.1 5 38 933 966 930 972 0.84
Sequence Information
- Coding Sequence
- ATGACTGAGGCGGTAGAAGAGGAAAATGAACTCAATGAAAAGCAGGAGGTTCGTGAATGTCGTGCTTGCTTGAAGAGGATGGAAAGTAATATAAGTGTGTGTAATATATTTCAAAGCTGGGCCATACCCTGGGCGGGCATGGAATCTACTATAGCTGAGGACCTGGCCAAACTAGCGAATGTTGAGGTATCGGAGGCGGACAATTTTTCAAAAGTTATATGTGAACCATGTTACCAAAAGTTATTAGAAGCATCTTCCTTTGCTGCCAAAGTGCGATCAACTCATCATATACTTAGGCTACGTCTTGGACCAGAATTCGATTATACAGAAAAAGTGTGGCCTAAACCCATCCAAgtggataaaaatataaatggtaaTATTTTTCAAGAAATGGACATTGAGATAAAACAAGAAATAGTATCTGATGCAGAGTATGATGATCCTGTAACAACGGATAACACTTATGTAGCAGATAATAGTTACACAGAGCAAGAGCTTGGTAATATGGAAATTAAAATTGAACCTGAGGAGATTGTAGAACCACCACCTTTAACAATTACTATTAATTGCACAATGTCACTTAACCCATCAAATCCTGAGGACAAAACATTAATAAACGGTAGTGAAGAATATGAAGCAATAATTTCAGACAGTACAGAGCATGCAACTTTAATTAATGGAACTGATCACTTACATAATGAACAAGTTCTAGAAGCTACTATAAAGGAAGAGCCTCAGAGTGAAGAGGAAGACTCGGAACATGTACCTGATCTATCGTTAGACTGCCTGCTGTGTACCAAGTCGTTCAATAGTGTGACGGGACTTAAGATAATTCCACGAAAGTATCAAAGAACAACACTACGAGCATCATGGAGTGCAGACGACTTAGACAAAGCCATGCGTTGTGTAATCAGCAAAGAGATGGGTGTTAATAAAGCATCCAGAAACTTTGGCATACCGTCCCGAACCCTAAGAAGGCACCTTTTAGCGGGCACTGCAAAAGGCCCTTTGGGACGCAAACCAGTATTTTCTGTACAGCATGAAAAGAAATTGGTTGcccatataaaaaaattggaaaAGGTTGGATTCGCACCTGATAGAAAAGATGTAAAAGAAATGGCATTTCAACTAGCTAAGAAATGTAACATTAAAAACCCATTTTCAGAAAAATCGGCTGGCAACGTTTGGTTTTCAGGATTCATGGCTCGCAACCCCGAATTAAGCCAAAGAAAATCTGAAGGATTGTCACTCGCTAGAGCTTATGGATTTAATAGAAAGGATGTACAGGATTTTTTTGATTTACTGGCTAAATTCTACGATGAGAATGATTTTGCTAATCACCCTGAAGATATTTTCAATATGGATGAGTTTGGGATTCAGGTAAACAACAAACCTGGAAAAGTGATCGCCACAATGGGAGCCAAAGATGTATATACGCTCACTAGCTGTGAAAAGGGTGAAAACGTTACCGTAATAGCTTGTTGTAACGCTCAAGGCAGCTTCGTTCCACCAGTTCTAATTTATAAAGGCACTTATAACAAACCTCAATTTTCCGAAGGTCTTCCACCAGGATCAAAGGTATTCATGAACAAAAAATCTTCGTATATCAATACAGATCTTTTCATGCAATGGTTCGAAGAAGTGTTTCTTTATCACAAGAGTCCTCGTaagaaattgttaatattagatGGTCACAGCTCGCACAGTAACAATATTCGCCTCCTAGAAGTAGCTAAACAAAATGACGTTATTCTATTGTGCCTTCCAAGTCACACAACGCATACTTTGCAACCTCTAGATAGAGCCTTTTTTAGGCCTTTAAAGGTATACTTTACTAAAGAAGCAAAGTCTTGGATGGTCAATAACATAGACAAAAATCTGACTCGTTATGACGTATCTAAACTAATTGGAAGAGCCTGGGGCAAAGCAGCCACTGTTTCTAACGGTGTTTCAGCCCTAAAATCATGTGGCATTTTTCCTTTCGATCCAAGTGCCATTCCCGATCATTATTTTGCGCTATCTGATTCGCTGCGGGacgaaaatttaataattgaagATAAAGATGGCACATCAAGAGAGTCTCTGTCATTACTACAAGATTATGACACCAGTGCACTAATCAATGCAAAACATTCATCACCACAGCAAATTCTAAATGATGTAGAGTCCTGGACGTTAGGATTACGTCCTACTATTGCAACCGAGGTCCAACCTGAACCAGGCCCTTCAGGGCTAAATCTACCTATACCAAGTTCTGAAGATATAAGTATGACGCTAGCAATTGGACATACATCACATGAGCCAGTTCTAACAAACGCAACTGGACCTGATGCAACACCATCAAAAGTACCCGTGCCAGTTATACCTAACGCAACTGAACCTGACGCAACACCATCTAAAGTTTTGAGTGATATGCACCCAGTGCCAAAACTTCCTGCGCATGTCATAGCTCAACATTCATATAAATCGGTCAAAAGAAAGGCAGGCAGCGGTGAGTCACCGGAGAAGAAACAAAAGGATGAATATAAGTGTGAGATATGTAGAAGATGTTTCACAACATCGACAGATCTAATGGTCCACGAGACGTGTCACAACAAGCACTCGTGTTACGGCTGTTCGAGAAAGTTCGACACGTTCAAACAGCTCACCAAACATCGCAAACGTTGTCGGGTGCCGCTCAGCAAGACTGCACAGAAGCCTAAGACATTAGACGATGTTATAAGCAAAAAACTTCCAGCACGAATAAACCGGGGCATAAGAAAATACGGTACCTGTTCAAACTATTCACAGCAAACATTAGACAGAGTGCTATCTATGGTTAGATCTGGTGAAATGTCTCAACGTACTGCGGCCATACAGTATGGGATACCAAGAAGTACTCTAAAGTACAAATTACAACACAAACACGCCAAAAAGATTGGCAAACCGACAGTATTCACTATTGAGGAAGAGGATATACCAGTAAAAGAAGAAAAACTGGATACCTCAGATGTCGATAATTCAGAACACAATCAGGAGGATTCAAAAGACAACAGTATGAAGCTACACTTAGAAATACATTCAGCTAAAAGTGAGGCGCAATCTTTTAAGAGTGAGACGCATTTCCTCAAGAGTGAGATTGAAGGAGTTGAGGAAAGTGCCGGTGCCTCTAATATGGAGAGTGTTAGTGAAGACTGCAGTACTTAG
- Protein Sequence
- MTEAVEEENELNEKQEVRECRACLKRMESNISVCNIFQSWAIPWAGMESTIAEDLAKLANVEVSEADNFSKVICEPCYQKLLEASSFAAKVRSTHHILRLRLGPEFDYTEKVWPKPIQVDKNINGNIFQEMDIEIKQEIVSDAEYDDPVTTDNTYVADNSYTEQELGNMEIKIEPEEIVEPPPLTITINCTMSLNPSNPEDKTLINGSEEYEAIISDSTEHATLINGTDHLHNEQVLEATIKEEPQSEEEDSEHVPDLSLDCLLCTKSFNSVTGLKIIPRKYQRTTLRASWSADDLDKAMRCVISKEMGVNKASRNFGIPSRTLRRHLLAGTAKGPLGRKPVFSVQHEKKLVAHIKKLEKVGFAPDRKDVKEMAFQLAKKCNIKNPFSEKSAGNVWFSGFMARNPELSQRKSEGLSLARAYGFNRKDVQDFFDLLAKFYDENDFANHPEDIFNMDEFGIQVNNKPGKVIATMGAKDVYTLTSCEKGENVTVIACCNAQGSFVPPVLIYKGTYNKPQFSEGLPPGSKVFMNKKSSYINTDLFMQWFEEVFLYHKSPRKKLLILDGHSSHSNNIRLLEVAKQNDVILLCLPSHTTHTLQPLDRAFFRPLKVYFTKEAKSWMVNNIDKNLTRYDVSKLIGRAWGKAATVSNGVSALKSCGIFPFDPSAIPDHYFALSDSLRDENLIIEDKDGTSRESLSLLQDYDTSALINAKHSSPQQILNDVESWTLGLRPTIATEVQPEPGPSGLNLPIPSSEDISMTLAIGHTSHEPVLTNATGPDATPSKVPVPVIPNATEPDATPSKVLSDMHPVPKLPAHVIAQHSYKSVKRKAGSGESPEKKQKDEYKCEICRRCFTTSTDLMVHETCHNKHSCYGCSRKFDTFKQLTKHRKRCRVPLSKTAQKPKTLDDVISKKLPARINRGIRKYGTCSNYSQQTLDRVLSMVRSGEMSQRTAAIQYGIPRSTLKYKLQHKHAKKIGKPTVFTIEEEDIPVKEEKLDTSDVDNSEHNQEDSKDNSMKLHLEIHSAKSEAQSFKSETHFLKSEIEGVEESAGASNMESVSEDCST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -