Cnig032450.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- gata4
- Assembly
- GCA_004329405.1
- Location
- SJPC01000603.1:20128-52526[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5 1.7e+04 -2.6 0.4 12 19 683 692 681 693 0.79 2 3 1.2e-17 1.4e-13 52.1 3.2 1 34 1005 1037 1005 1039 0.97 3 3 4.9e-18 5.6e-14 53.3 4.1 1 34 1059 1091 1059 1093 0.98
Sequence Information
- Coding Sequence
- ATGCAGATTAGCTCTATCTTGAGCCACGGGATGAATGAGCCTACCCTAATCTGCAACTGCGGCCACACAGCCGTCGGTGCAGATTTCAGCGGCAGACACCGCGACGACACTGACTCCGATGGGCGAGTTATAGCAGCACGGTGTGCGCGGGAACACCTGGCCTTCCTCTTATCGGAAATAGGCAGAACGCATCCAGTTGAGCGTCATACTTATATAGTCCAACGGCCGTGTCTCATCTCCTCTCCTACCCACAATGCACTCCCTGTTCCTTCCGCACGTGATATTCCTGAGGTTTCGTGTGCCGCACGTTTCACGCGACACACCGATTACTCAGCGGCCGCGTGGACAATCGAGTTACGCATCAAATCGTCACGATCGGCCCATATTGCATCGCTCGAGGTCAGACAATGGTCTATTGAGAGCGCGATGCTGATCGAGTATGTCGGGGCCACGGAACCGGAGTCCACCAGAGAGGCAGTCGTCAAGCAGGAGGAGGGACAGGCGGTGACGGCGATAAAGAGCGAAGACGTCATCGAGAACGAAGTCGAACGGCAGCAGGAGCAGGAGCAggagcagcagcaacaacagcaacaacagctggCGACGTACGTGGCGAACGAGGAGACCGGAGAGGAGAGCGGTGTGGGCGTGCTGGAGGCGGGACAGCCGGAAATGGAAAATGGCGTCATGATACAGCCAACCGGTGCCGAAGCAGTCGCTATTGCggtcgccgccgtcgccgctgTCGCCAACGACGGTCATGCCGACGAGGATCCCAACGCCACTTACACCCTTCACGAGCTGGGCTACCATCCCGCGCACATAATCCACCAGAGTTTCGGGGGCGGCGACATGAGAGAGGAACAACAGGTTTCGCAGCCGTCCCACCAAACGCACCACCAACAGCAACATGACGTGCACCACCACcgtcaacagcagcagcagcagcagcagcagcagtacgTTCAGCTCGGGGCGAGAGAGGTCCCGGTTCCCGAGGGAGGGGATAACCGGCACCCGACGGAGGTTTCCGTCGCATCGGAAGGACGCCGCTCCGGCAGTCACATGCCTCATTCCACGATGCATCGTTACGGTACCGAGACGCTCTCGCCGACGACGACGgaccatcatcaccatcagcagcatcaacaacaacaacaacaacagtcacATCATCATTTGTCCGAGGTGCATCAGCACGCTGTCATCGCCCTATCATCCGCGCACCGTCATTTGCAGGATCCACAGCAGCACCAGCATCATCAAGAGACCGACGAGGACGTGGATCGAGGTGTGAGCGGCATCACTGCGGCCATGAGAGGCGCGCGGGGTGATTATCTGGGAGTACTCTTCACGAATCTCGCCGCGTCAAATGCCACGTCGAGCAACAGTGGCAAtaaccatcatcatcacacagcGCATCATCTGGATGACGTGCTGTCCGACGAATCATACCTGCAACATCAGATTCGTGGAAACGCCCCGCCGACCAGCAGCGGTAACGGCAGTGGTGGCGGCGGAGGCTCGCCGTCGGTGAGGACCGTCGGTGGCTCCCCGACTTCCAGTCACAGTCCCCACGATGATCAGGGTCTATCCTCGCCACATCGACAGGCCCAGGAAGCTGGTTATAGCCCCAGTGATCAGGGCAGATTGCAATCTTTCACCCATCTCACGGCCATGCAGCCACCGCCGTCGGTGCAGACTAATCACGGACTGCAAGAGACCGAGCGCGTCTCCGATCAGCTGTACATGGACTCGATCTACACGCATCACGCGACCGCCGGCACCCCGCATCATCATCAGGATCAGCACGATCAAGGCTCCTCCGCACCGCACTCGCCCAGTCCGCTTTCCAGGCGATACAAGGCCGAAACAAAGCGAGACCGTCGGTGGAGGACCATGACGATCGCCCAGCCCTATGCTAACAACTATGTGAAAGCGAAGGTTGTCCCCACTCGCGTCGCCGTGTTTGTTGATTCATCTCGGGCACGAGCCTTCGAGAATTTAGGTATACTCGACGACCTaagTCCATCGTCTGCACGTGCATGGCGTCGCGGCGGCGGTCCCTCCGGCCAGGACAAAAGCGAGCTGGTCGATCACGTTGGTGGGGATGCCCTCGTGACAGGCGCGATCGGGGAAGACGATGTTGGAACGCAACgcgttaaaaaaatgatagaagtGGGGATAATTGTCCGCCGCCGACAGGAGAGTCCCCACCGGGTGGACCTCGTAGGGACTCGGGAAAATCCTGACCACCTTCGGAGCGAGGTCCTCCGGACTGCTCCGACTCGGCTCGACGTTTCGTGCATGCCGTTAGATTATATTGCGCTCAGTTCTTGTCTGCCCGGTGACAGATACGGGGCTCCCCGGATACTTTCTTTTATCCTTCACGTCatcagctttttttttctcttctttgacATCTTCATTCCTTGCGAAACGGAAAGAACGGTGGAAGAGAGACGAGGAAAGGAGATACATATCGGAGCATATCGATCTCGATCGGTCACACCCGCTAAGATGCACCAATCGTATCGGCCGATGAGCGGCGTGGGCACGATGGGCATAGGGACTGCCACGGGGGGTACCTACGCCCTCCCTTACATGACAAGCAGCCCTACGGAACTGGCGTCGTCGCCTCAGCTTTGGAACACTCAAGGTTTGAGCAGCGGTCTTTCCATCGCCGAGGATTACGGCAGCAGCAAATCCTCGGGTACGGTGTCTCATCAATCCCTGCCGGCGTTCTCGCAGCCCTTTGGCGCGCGATCGTACCGTTACAGTCCACCTTACGTGACATCTCAACAAAATACCACCGGCTCCGCCGGCGCCGTCGTGGATGCCACTTCCTGGACGTACGCATCGCCCACGAGCGATCCGCTGACGACGCAATATGGTTCATTTCCAAAACGGCAGACGGTTAATTCCGGGACGGCGCCGACGCAACTCAGCGCCGCGGCAAGCCTAACTGCAATGCACAACATCGAGGCGGAGTACTTTACGGAGGGCCGCGAGTGCGTGAATTGCGGCGCGATTTCCACACCCTTATGGCGTAGAGACGGCACCGGGCATTACCTCTGCAACGCATGCGGTCTCTACCACAAGATGAATGGAATGAACCGTCCTCTAGTTAAACAGCCACGCCGCTTGTCTGCTACGAGGCGCGTTGGTCTCTCTTGCAGCAATTGCGAAACGACGATGACATCGTTGTGGCGCCGCAACACACACGGCGAACCGGTGTGTAACGCCTGCGGTCTTTACTTCAAGCTGCACGGTATCAACAGGCCGTCGACTATGAAAAAGGATAGCATTCAAACGCGCAAGCGGAAGCCTAAGGGCGGAATGAAAACCAGCGACACGCCTCTCACGGGCACTGTCGCGCAATGtgcaaacaacaataataataacaacaatgtCAAACTTGAGCCAGATACTTACAACGACCTGAGGATGGCTCACGGCGTGTCGCAAGTGTCATACACGAGCAATATCTACGGCAGTGCTCAGGCTCCGAGTAGGATAGTGTCTTATCAGCCCACGACCACAAACCTGTATTATGACATGATCAATTCGCAACAGCATCAACAGCAATTACTGGAGGCTCATTCGCCCAAGATCGAGTGTCCGTCTTCCCCTTGTGCCACGCGTTCGCCTGGAATGGTCTCAGCTGGTCAATCAcctgatcatcatcagctcACCTCGCCGCATATTGTCACGCTGGGCAGTCCATCGAGTAGCCCAGCTGGTCCTAAGATTATGCTGGACAACGGACACCTTGAGAGGTCTACGGTTGTTTCAATATCATCTTAG
- Protein Sequence
- MQISSILSHGMNEPTLICNCGHTAVGADFSGRHRDDTDSDGRVIAARCAREHLAFLLSEIGRTHPVERHTYIVQRPCLISSPTHNALPVPSARDIPEVSCAARFTRHTDYSAAAWTIELRIKSSRSAHIASLEVRQWSIESAMLIEYVGATEPESTREAVVKQEEGQAVTAIKSEDVIENEVERQQEQEQEQQQQQQQQLATYVANEETGEESGVGVLEAGQPEMENGVMIQPTGAEAVAIAVAAVAAVANDGHADEDPNATYTLHELGYHPAHIIHQSFGGGDMREEQQVSQPSHQTHHQQQHDVHHHRQQQQQQQQQQYVQLGAREVPVPEGGDNRHPTEVSVASEGRRSGSHMPHSTMHRYGTETLSPTTTDHHHHQQHQQQQQQQSHHHLSEVHQHAVIALSSAHRHLQDPQQHQHHQETDEDVDRGVSGITAAMRGARGDYLGVLFTNLAASNATSSNSGNNHHHHTAHHLDDVLSDESYLQHQIRGNAPPTSSGNGSGGGGGSPSVRTVGGSPTSSHSPHDDQGLSSPHRQAQEAGYSPSDQGRLQSFTHLTAMQPPPSVQTNHGLQETERVSDQLYMDSIYTHHATAGTPHHHQDQHDQGSSAPHSPSPLSRRYKAETKRDRRWRTMTIAQPYANNYVKAKVVPTRVAVFVDSSRARAFENLGILDDLSPSSARAWRRGGGPSGQDKSELVDHVGGDALVTGAIGEDDVGTQRVKKMIEVGIIVRRRQESPHRVDLVGTRENPDHLRSEVLRTAPTRLDVSCMPLDYIALSSCLPGDRYGAPRILSFILHVISFFFLFFDIFIPCETERTVEERRGKEIHIGAYRSRSVTPAKMHQSYRPMSGVGTMGIGTATGGTYALPYMTSSPTELASSPQLWNTQGLSSGLSIAEDYGSSKSSGTVSHQSLPAFSQPFGARSYRYSPPYVTSQQNTTGSAGAVVDATSWTYASPTSDPLTTQYGSFPKRQTVNSGTAPTQLSAAASLTAMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSATRRVGLSCSNCETTMTSLWRRNTHGEPVCNACGLYFKLHGINRPSTMKKDSIQTRKRKPKGGMKTSDTPLTGTVAQCANNNNNNNNVKLEPDTYNDLRMAHGVSQVSYTSNIYGSAQAPSRIVSYQPTTTNLYYDMINSQQHQQQLLEAHSPKIECPSSPCATRSPGMVSAGQSPDHHQLTSPHIVTLGSPSSSPAGPKIMLDNGHLERSTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -