Basic Information

Insect: Cataglyphis niger
Gene Symbol: -
Assembly: GCA_004329405.1
Location: SJPC01001428.1:14306-20894[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00051 0.35 13.3 0.2 1 23 208 231 208 231 0.95

2 9 6.7e-06 0.0046 19.2 4.6 1 23 236 258 236 258 0.99

3 9 5.2e-06 0.0036 19.5 1.5 1 23 264 286 264 286 0.98

4 9 0.00057 0.4 13.1 0.7 1 21 292 312 292 315 0.89

5 9 1.9e-05 0.013 17.7 1.4 1 23 321 343 321 343 0.97

6 9 3.9e-05 0.027 16.8 2.3 1 23 349 371 349 371 0.98

7 9 0.00023 0.16 14.3 5.9 1 23 377 399 377 399 0.98

8 9 3.9e-08 2.7e-05 26.2 0.8 1 23 405 427 405 427 0.98

9 9 0.00095 0.66 12.4 1.3 2 23 436 457 435 457 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00051	0.35	13.3	0.2	1	23	208	231	208	231	0.95
2	9	6.7e-06	0.0046	19.2	4.6	1	23	236	258	236	258	0.99
3	9	5.2e-06	0.0036	19.5	1.5	1	23	264	286	264	286	0.98
4	9	0.00057	0.4	13.1	0.7	1	21	292	312	292	315	0.89
5	9	1.9e-05	0.013	17.7	1.4	1	23	321	343	321	343	0.97
6	9	3.9e-05	0.027	16.8	2.3	1	23	349	371	349	371	0.98
7	9	0.00023	0.16	14.3	5.9	1	23	377	399	377	399	0.98
8	9	3.9e-08	2.7e-05	26.2	0.8	1	23	405	427	405	427	0.98
9	9	0.00095	0.66	12.4	1.3	2	23	436	457	435	457	0.96

Sequence Information

Coding Sequence: ATGGAGAATAGACCGTCGCCGCTTCGCTCGCGGCGCGTCTGCCGATTCTGCCTGACGGAGGCGGAACCGTTGAGCTTCATCTACGAGCGCGACCACAACAAGCCGTTCCAGGTGCCGCTCACATTGCAAATCATGTCCTGCGTCGCCATCGAGGTGTATGCTGCGGATGGGATGCCACAAATGATTTGCAACATGTGCCGCTGGAATCTGGATCGTTCTTACAAATTCAAACTGCAATGTAAAAAGGCTGATGAAGCGCTACGGGACTACCCTCTGTCTGGAGTATTGCCTAGACCCTTCCCACCCATCCCCAACGACCCACCGATAGAGACTGGTAGCAAGAGACCCGCCGAGTCTAGATTGCAACACGACAGCGCTAAAAAGCTACGCTCCGATAGCGAAAATCAGAGAGATACTCGAGAGAGACGCgagacgagagaaagagaaagagaaagagaaagggaaagagagagagaaagacaaaatGAAAAGAAGGATAAGTCTGGCGATCAGCGCCATGATCTTTATGATGAGGAACAGGATGGAGGTAGCGAAGGTGAACAAGAGGAAACAAACAACACCAAGGAAGAGAGGAAACTGGAACCCGGAGAGATCAGAGTACATGCGTGTGATCAGTGTGATCGTACATTTCCCCTGCGTCAAGCTCTGGCGTTGCACATTCAGCGCGCACATCGCGATCGCAACTATAAGTGCACCGAGTGCGATCGACATTTTTTCACTAAATACGACCTCGGCAAACATATGAGTACACATTCGGAGGAAAAGCCGTTCTCGTGCTCGATCTGCCAGAAGCAATTCTCGCGACTGAACTTGTTACAACGTCATGAAAAGGTGCATCGGGATGAAGCCCGCTATGCTTGCCAGCATTGTGATCGCGAGTTCTTCACTACGGAGGAACTCGAGAAACACGAGGACGCGATGCACAAAAAGGACAAACCGTTTCAGTGCAACATCTGTAACAAGCGTTTCCAGTACAAACAGGGCTTGGAGCGACACGAGATGCTGCACAGCGAGGACAAAACATTCGTTTGCGATTACTGTAAGGAAGCCTTTCACACTAGCACCAAGCTGGCTCGGCATCTTTCCACGCACGCCGGTCATCGGCCATTCATGTGTAAACTATGTCCGCGCACGTTCTTACTCTCCCATCACTTGACGAGACACATGCGTACTCACTCCGTGGAGAAACGTCATGTGTGCGAAGATTGCGGTAAGGCGTTCAAGCGTAAAGAGAGTTTGGAGGTACATCAATTGACGCACACAAAGCGCACTGGAATGGGCTTGACCTGCGATGTTTGCCAAGAATCTTGTCGTAATCGCGCCGATTATGTTACTCATATCAAGCAACACATTGAAGCGGGCGAAAAGATGGGACCGGATGGTCTGCAGCCTGACAACAAGGCTAAGTCCATCGAACTAGATTCGGATGAGgatgaagaggaagaggatCAGTATTCGGATGGCGATGACGATTACACGCCGCCAGCATACATCGCGAAAAAACTGCCGAAGGCACTGCCTAGACCTTCGGAAagtgaagaagaggaagaggaagaagacagagaagagaaggaagaaaaatctGAAAGGCAAGAAAAGGAAGAACGCAAAGAACATCAAGTGGTTTATGTGCGCAGCAAGGATGGCAACATGGTGAAGAAGACCATCAAGACACTGATGCCAATCCAACGTTGCGATATTCAAGAGCAGAAGACCGTAAAGCAGAGTGTTTCCACCGCTTCAGTTTCTCAGAGCAATTTGAAAGGTTCTTCGACGTCGCAGATCAAGGATGATAATATCAAGAGCAGTCGCGTAGATGAGACCGAGGCACAAGTACAGAAGATTGTTGCTACGGTATTTAAGGAACACAAGATTCCGctgaaaaatcagcaaaatgcGGGCCAGGATCAGTCTAAGGACTCATCGGCTCCAGTGACGAGATCCCAAACTGCTTCTCAGGATACTCACAAGGATAACGAGAAGACGGAGACCATTGAATCCAAGCCGAAAGCCGTTAATACGGTTAAAGTGATTAAAAGAATCGTGTTGAGGAAGTCGGCGGGAGGAAACAGTAACGAGGGAACACCGGTTAGTACATCTACTATCAAGGATGGAGAGACCAGCATAACTGGCACTCCGGGTTCGCACAAGGTCAAGCGCGTAATTGTTCGTAGAATTATCCGGCAGGGCGATACTACTCGTGAAGTCATCATGAATCCGGACGGCACCGCGATAGACCCCGCAGAATTGGCGAAATTGCCGACTGGTAACGTAGTGAAACGAGTAGTGGTAAAGCGTCCATTCGACAAGGGTCAAAGTTTGGTGCAAGCGGTATTGCAATCCGCGGAGCAACGTCAGAAAGCAGCCGATACGGGCATTCTGAACGAGAAATTTGAACTGAAGACCTCCGCCTCATCCAGTAGCGGAGCTGCAAGTATACCGAAGAGCTCGATCGCTCCGCAGAAGACACAGATAATTTCCCAGGGTCAGGATCAAGAGACCAAGGAAAAACTGGAACAACTGGAGAAGCGAGTCGAGCAACAGAGGTTGAAGATCGAGGAGCTTCAGGCAAGGAAGGCGCAACAAGATTATGAGGCGATTGATGAGATGTTGCCAGAACGACACGATGAGTCTGAAGATGAGCAGCAGTTGCCGCTCAAGAGGGTGTTTGTGAAACGAAAGCAGAGTATATATGATGAGGAGCGAGAATATAATGATGACGTGGAAACAGAAACGACGAAAATCAATCCGACTCAAGGAGTGAAGGATGAACAAGGATCAGcgaaggaagaagagaaatctACCGTAGAAGAGACATTGGAGAATGTTCAAAAGGAAATCCAGAGCGCGTCGAAAACAACGACGACAACCACTATCGAGAACATTACTACCACAAACAGTACACCGGTCCCGAAGAAGGGTCCGACGATTTCGAGTAACAAGGTATACTCGAACAAGCGCTATATGATCGTAAAACCTGGCGAAACATCGGAAGTAGAGGAGATGAGTCGCGAATTGTGTAGCATCTTAGAAACTACCGATAGCGTGGTGAAGATGCAAGAAACTATGCTGAGCAATCTCACGCAAATTTCCGGCATCGCAGCGTCATCAGCATCGGACATAAACACTTCAAGCACGTCTGCGAAGCTGAAGACCGACAACTCATCCATGGAGGTTGACGAGCAGATTGGGCAAGATTGCGTGATGCAGGTGGATTGTGACGTTGCTACTATCAAGCAAGAGACCGTGATGGAGGTTGAGGTAGCGCAGGAGACGGAAATTAAATTGGATCCTGAGACGGAGGAGCCTGCACAGGTGAGCGTTACGCAAGAAGAGAATCAGCCTGATAACGGAACTCTATCACTAGACACACAGGATCTTTCCGAGACCGCTTCGATCTTCGAATCATCGGATGATGTACTGGAGGTGCAGAAATCGACGAGCGGTAACCTGAATGATTCTGTTATTGAGTTGTCGCAAGGTAATGAATCTGTcatcaatttaaatgatacCAATGATAGTCAGGACAGTTTGGAAGACAAACTCTCACAAATGGAAGgttaa
Protein Sequence: MENRPSPLRSRRVCRFCLTEAEPLSFIYERDHNKPFQVPLTLQIMSCVAIEVYAADGMPQMICNMCRWNLDRSYKFKLQCKKADEALRDYPLSGVLPRPFPPIPNDPPIETGSKRPAESRLQHDSAKKLRSDSENQRDTRERRETRERERERERERERERQNEKKDKSGDQRHDLYDEEQDGGSEGEQEETNNTKEERKLEPGEIRVHACDQCDRTFPLRQALALHIQRAHRDRNYKCTECDRHFFTKYDLGKHMSTHSEEKPFSCSICQKQFSRLNLLQRHEKVHRDEARYACQHCDREFFTTEELEKHEDAMHKKDKPFQCNICNKRFQYKQGLERHEMLHSEDKTFVCDYCKEAFHTSTKLARHLSTHAGHRPFMCKLCPRTFLLSHHLTRHMRTHSVEKRHVCEDCGKAFKRKESLEVHQLTHTKRTGMGLTCDVCQESCRNRADYVTHIKQHIEAGEKMGPDGLQPDNKAKSIELDSDEDEEEEDQYSDGDDDYTPPAYIAKKLPKALPRPSESEEEEEEEDREEKEEKSERQEKEERKEHQVVYVRSKDGNMVKKTIKTLMPIQRCDIQEQKTVKQSVSTASVSQSNLKGSSTSQIKDDNIKSSRVDETEAQVQKIVATVFKEHKIPLKNQQNAGQDQSKDSSAPVTRSQTASQDTHKDNEKTETIESKPKAVNTVKVIKRIVLRKSAGGNSNEGTPVSTSTIKDGETSITGTPGSHKVKRVIVRRIIRQGDTTREVIMNPDGTAIDPAELAKLPTGNVVKRVVVKRPFDKGQSLVQAVLQSAEQRQKAADTGILNEKFELKTSASSSSGAASIPKSSIAPQKTQIISQGQDQETKEKLEQLEKRVEQQRLKIEELQARKAQQDYEAIDEMLPERHDESEDEQQLPLKRVFVKRKQSIYDEEREYNDDVETETTKINPTQGVKDEQGSAKEEEKSTVEETLENVQKEIQSASKTTTTTTIENITTTNSTPVPKKGPTISSNKVYSNKRYMIVKPGETSEVEEMSRELCSILETTDSVVKMQETMLSNLTQISGIAASSASDINTSSTSAKLKTDNSSMEVDEQIGQDCVMQVDCDVATIKQETVMEVEVAQETEIKLDPETEEPAQVSVTQEENQPDNGTLSLDTQDLSETASIFESSDDVLEVQKSTSGNLNDSVIELSQGNESVINLNDTNDSQDSLEDKLSQMEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01255029;
90% Identity: iTF_00730970;
80% Identity: -