Cnig028436.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- glmp
- Assembly
- GCA_004329405.1
- Location
- SJPC01002283.1:16078-24793[-]
Transcription Factor Domain
- TF Family
- NCU-G1
- Domain
- NCU-G1 domain
- PFAM
- PF15065
- TF Group
- Unclassified Structure
- Description
- NCU-G1 is a set of highly conserved nuclear proteins rich in proline with a molecular weight of approximately 44 kDa. Especially high levels are detected in human prostate, liver and kidney. NCU-G1 is a dual-function family capable of functioning as a transcription factor as well as a nuclear receptor co-activator by stimulating the transcriptional activity of peroxisome proliferator-activated receptor-alpha (PPAR-alpha) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-23 2.5e-18 68.1 0.0 2 72 71 138 70 141 0.97 2 2 1.4e-52 4.8e-48 165.8 0.2 225 351 155 280 138 282 0.91
Sequence Information
- Coding Sequence
- ATGACGAAACAGAAAAACCTTGAGGCTTCTCTTGCTGTTTTGGATGTTGTTGTCATACGCGACGGCGGCAGGCATGTCCAGCGCCTTTACGGTTTCCCTGTTGTTCGTCGTCGCACTGGCAGATTTGGGTTATTCCACGCGACGCACGGTGAGAACGTTGCAAGGCCGTCGGCCACGCAATCCGGCACCGATGTAGAGCGAAACGGGACGACGCTCCACCTGAGTGCCGATGGACCGAACGACACGTTGCATTACTTATGGGATTTCATCGGCACCCCGTCCATACTGTTGGCGCTTATGCCTCCGTCCACCTCGCTCAACATCAGCTGGGATGATTATCTCGCGAGGCGAGAGAATTCGTTACATTTTTCGGAGGCAGAAATCTATTCCTTTggcgtaataataaataaggtAACTatCGTCGAAGTTAGAACGCCACCCAAAGAACTGGACGGCGCGTTAAACAGCGGAGCGTATTTGCAATGGCGACCGGTATCGTACAATAGTGCGTCACGCGATGTAACCAGTTCCACAGAAACAATGCAATACCCACCGAggaaaatatctaattatacgAGCGCTGTTAAAAATTCGATGCTCTATTGTTATTATGGGAATGTGACGAATCTTCTCCTACAAAAATTAACGATTTCTTTGGGTTCGAAAGGGGATGGTTTTTATAAGAAGACAAATTATTTGACATGgACTTTTATAATTGGCTACGGTACACCACCCGAGGAGAGATTCTCTTCTCTAGTCATTATGATTATCTCGATTGGCCTTGGCCTTCCTTTGCTCATTATGATCATCACCGGCCTGTATCTTTGCATTCGTAGAATACCGAAGCGACATGGCAACGTTTATTTAAGTCAATAA
- Protein Sequence
- MTKQKNLEASLAVLDVVVIRDGGRHVQRLYGFPVVRRRTGRFGLFHATHGENVARPSATQSGTDVERNGTTLHLSADGPNDTLHYLWDFIGTPSILLALMPPSTSLNISWDDYLARRENSLHFSEAEIYSFGVIINKVTIVEVRTPPKELDGALNSGAYLQWRPVSYNSASRDVTSSTETMQYPPRKISNYTSAVKNSMLYCYYGNVTNLLLQKLTISLGSKGDGFYKKTNYLTWTFIIGYGTPPEERFSSLVIMIISIGLGLPLLIMIITGLYLCIRRIPKRHGNVYLSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -