Cnig004183.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- -
- Assembly
- GCA_004329405.1
- Location
- SJPC01003121.1:937-4586[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.13 4.4e+03 -0.8 4.1 53 104 86 137 66 181 0.52 2 5 0.22 7.6e+03 -1.5 0.2 64 102 212 250 187 256 0.71 3 5 0.56 1.9e+04 -2.9 1.2 77 104 271 301 235 377 0.64 4 5 0.53 1.8e+04 -2.8 3.9 74 136 410 473 365 488 0.48 5 5 6.1e-13 2.1e-08 36.3 0.2 1 28 706 733 706 741 0.94
Sequence Information
- Coding Sequence
- ATGGAATCGCCTTCGGCCCGTCAGGACTGTCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGCCTGAACCGGAAAGCGTATCATCTCCAAGCaagacgatgacgacgacaacgacgccAGCATCAGAAGCTGAAGATGACGCGCGAGATTCTCGTGCGGACTTGGTGTGCGAGAGACTGGATGAAGGATCGGAAAATCAAGGATCTCGGGAAGGACAATTAAGTGATTATCCTTGCCTCCGGAAATTAGAGGAGGAGAAAGACATGGACCGAAAGTTGGAAAAGGAAACCAGTGAAAAcggaaaaaatttagatattgattttaacgTGGAATCGACGACAGATTCTCTTCAGGAATCCGAGGAGTCTTCGAAGAAGTCCGATTCTCAAAATTGTAATGTCGAGGATGAGGAGGATAAGATCGAAAAGAAGAGGTCGATCGGGAGTGACTTTCTGCCAATCGGTGCTCAGGAAATCAGGAGAGTTGGCGTCGAGATCTCGGAGGAGGAGGCGACCCAAATGAGAAACGACGTCAGAAGGTTGTCGCCGGTATTAGTGAGCTTGCGAGAGAGAACCTTAGGCGAAGTTTTCTTGTCTTCTCAGTCCTGTCTCTTCGGGGACGAGGTTGACACTGGCAAGGCAGTGTCGCGAAGTAATGCCATCTCGCAAGAATTATTCGCGAAGGACGATTCTAGAATTCAGGATGCCCATCAGAGTGAAAAGCGGGATGTCAACGAGGAGGAAATGATCGTCAAGATCGACGCAGGTCTTCCAGATTGCGCAGACAGGAAACTGAATTATAAAGAAGAGGTGTTTAGCAGCGACGTAGCTTCTTCGAGTCCCTCTAGGCTCGAGAATTCAGATGAGACGAGTCAAAATGATGTGGACGTGACTGCGAATATAAAGAGCGCATCCTGCACGCTGATCGAGAAGAAAACGACATTGAGTCCTTCACCATCGAGTCCCGTTCGTCGACATTTAGCGATAGTGCTGAACCGCGTCAATATGGGAGACGCAAACATCGACAAACTGACAAAAGAAAATGACAACGAGAGCATATGGAACATCGACGAAAGTTCTCCATGTcctaaaagaagaagaaattccgTCGAAGAAGAGTGCGATTCGTCTTCGGAGATTTCGAAAATCAATGAGAGAAGCCCGAAGAAGCAACGGTTGCAAAGTAACTCCTCCCCGACGACAAGATCGAAGAAGTGCGAACTGATAGAGAATAATCAAAGTCCTGATCGCAATCTGATACTAAAAAAGTGCAAAGTGGTGCTGGAGCGAATCATGAAGAGCGAGATGGAATCATCTCAAGAGGAGGACTCCCAAATTGAGGAACTCGAAGCGTTGAAAGAATCCGAAAGAGAAGAACTCGGACCCGTGGCGGTGATCGGCAAGCTGGAGGAGGACGAGGAGGTGGTGCTGACGAGCTCATCGTCCTCGGGTGAGAATAGCCGGGCGTTTAACGAACTGGATTCATTGGAGACGACGCCGAGTTCGCCGGAAGAAGGTGAGACGACGCCGGAAGAGACATCGGTCGACGTCGGCGCCGAAGGTGTCGACACCGAGACGGAAACTGAGACCGGCTCCGACGTCAGCTCGGAGGTGTCGCCCATGACAAACATCCGGGAACTACGCGACATGGCGTCCGATCATCAGCTACCCTGCCCCGAAGAAGGACCGCTGTGCTGCGTTGAGGTGATGGCGCCGATCATGACGAGATTGGAGGCTGAAGGGCCGGAAGCTTATACGGAAGACTCCGCCGAGAGTCTGACATTAGCTACCGGTGCTAGAGACGAAGTTAGATCCGATGGGAGCGATTCCGGTCTAGGGAATGAGATTCCTGGTGATCCTGGACCGGCGCCCGCACCGGAAAGCGACTCGGAGACCTCTTTTCTTGACAGACTGCCGGACGATATCCTCTCTGACAAGGAGAAAGgCGTGAATCAACTAGATGGCTTCGCGCCGTCCTCGGGCACGCCTGAGACTCCGGGCCAGGCACCTCTGACGAGTTTCCGGGCACTTCCGGCTAAAAGCAATTTGAAGCGCAGGCTAACCGACTGCATGGAGGGCGATGAGTCGCGGAGCAACCCCGATGAGCCCGTGAAAAAAAAGCGCAACATCCAGTTCGATGCAGTGACAGTCTATTACTTCCCCAGGACGCAAGGCTTCACCTGCGTACCTTCCCAGGTAAGTCCTAAAActgctctttctttctctctctctctctcttttttaacttttaagtAG
- Protein Sequence
- MESPSARQDCLVEAQEDSTSVEPEPESVSSPSKTMTTTTTPASEAEDDARDSRADLVCERLDEGSENQGSREGQLSDYPCLRKLEEEKDMDRKLEKETSENGKNLDIDFNVESTTDSLQESEESSKKSDSQNCNVEDEEDKIEKKRSIGSDFLPIGAQEIRRVGVEISEEEATQMRNDVRRLSPVLVSLRERTLGEVFLSSQSCLFGDEVDTGKAVSRSNAISQELFAKDDSRIQDAHQSEKRDVNEEEMIVKIDAGLPDCADRKLNYKEEVFSSDVASSSPSRLENSDETSQNDVDVTANIKSASCTLIEKKTTLSPSPSSPVRRHLAIVLNRVNMGDANIDKLTKENDNESIWNIDESSPCPKRRRNSVEEECDSSSEISKINERSPKKQRLQSNSSPTTRSKKCELIENNQSPDRNLILKKCKVVLERIMKSEMESSQEEDSQIEELEALKESEREELGPVAVIGKLEEDEEVVLTSSSSSGENSRAFNELDSLETTPSSPEEGETTPEETSVDVGAEGVDTETETETGSDVSSEVSPMTNIRELRDMASDHQLPCPEEGPLCCVEVMAPIMTRLEAEGPEAYTEDSAESLTLATGARDEVRSDGSDSGLGNEIPGDPGPAPAPESDSETSFLDRLPDDILSDKEKGVNQLDGFAPSSGTPETPGQAPLTSFRALPAKSNLKRRLTDCMEGDESRSNPDEPVKKKRNIQFDAVTVYYFPRTQGFTCVPSQVSPKTALSFSLSLSFLTFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -