Basic Information

Gene Symbol
RERE
Assembly
GCA_004329405.1
Location
SJPC01006521.1:127-9417[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-08 0.00011 24.1 0.2 2 45 74 118 73 119 0.88

Sequence Information

Coding Sequence
ATGGCGTTGGACGGGGATCTGCTCATGTACTTGAGGGCGGCCCGTTCAATGGCAGCGTTCGCCGGTATGTGTGACGGCGGTTCACCGGACGATGGTTGCGTGGCCGCCGCCCGAGACGACACTACCATCAACGCGCTGGATATCCTGCACGACTCTGGCTATGATCCTAGTAGGGCGCTCCAAGCACTCGTCAAATGTCCTGCACCGAAAGGCATCGACAAGAAATGGTCCGAGGAAGAAACTAAGCGATTCGTCAAGGGTCTACGGCAGTTCGGAAAGAATTTCTCACGTATTAGAAAGGATCTTTTACCTCACAAGGATACGCCGGAGTTGGTCGAATTCTATTACTTATGGAAGAAGACACCGGGCGCGAATAATAATCGTCCTCACCGGCGACGCAGACAGAGCTCGCTACGACGAATCCGCAACACGCGTAATTCTCGGGCTGGCACACCCAAGGAGGAAATTCCTACACCTACTAAGGACACACCGCCAGCAGTTAACCTTAGCACGAAGGAGACCGCGTCCGAGGTTGAGACCGTACCTGTCGGTACCCCGGCCAGCCACAATCCAGGCGGCGAGATTAGCTCTGTGACCGAAGACGACAATTCGGAGGAGGACAGTGATTCGCGCGATACCAATACGAATGGAGCGACGCATTCATGCCAGCACTGCTTTTCCAGTAGCTCAAAGGACTATCAAGTAGCTGGCAAAGATCGACTATTACTCTGCGCGGAATGCCGGGCGCACTTAAAGAAGACTGGGGAACTGCCGCCCTTGCAGCCATATCTGTTCCGCCCGGTGCCCGCGGAATCTCCCGAGAGTCCCGGTAGGATGCGCACGCGAAATAAGGCTAAGGAGACACCGAGACCAGCGAGACCGCGACGAACCGGCGGCGGCACAGACACACCCGATCaagaaaagcagcagcagcaacagacgcccgataaaaataagaagaaatcgTCCGGCAAAGCCGATACGCCCAAGAAGGGTCATAAGCGCTCGAGTCAAACGGATGACACTTGCAACGACGAGGATAAGGAAGCACAAAAGCGAAAACGTGGCGGCGGCGAACGGCCCGATAGCCCGTCCGAATCTCTTACAACCGACAGTAATTCCCTAATGGATGAGCCGGAGAGAGAAACGGAAGGTGACGCTAACGAGAATCAACCGACACCGCCAACGGTAGCCGGCGTAACCGGTGGAGAAGAGCCCGTCAGTAGTCCGGCCGTCACGACACCCGAGGAACCATCCGAGCCAACGCCGGCGTCAACCCCGGTACCGACCACGATACAAAGCCTGCCGATATCGGTGCCGGTAATACATAATCTAGAAAAAAAGCCTTCTGTTTTATTGGATCAAGAATCGATAGATCAAAATAAGATATCAGATCAGACGGAAGACGTACCATTGGTCATGAATCAAGCCCTGAAATTAGAACCATTGCCAATCGAGTCAACGATGTCACCAACTATGTCTAACGAAGATATGGGCAAGGAGCCCGAAACGACACAGTTGAATTTGAGCACATCTGCGCAATCTGTTGGGACGGGTCCGAGCGACACAGCAAGTCCCACAGTTACGGTTCGCAATCTGTCGCAAACTATACCGAGCATTATCACAAGCGTAGGCTCACAGGCAGCTATATCGAGTTCGCAAATTCCGGTGATATCGCCCGGTCAGCAACAGACCGGCACTGCCGGTGGACTGCCGACAAGTCTCAGTATGCAGTACGTTcagccgccaccgccaccaccaccgccgccgGTACAAAATGTGCCGCAGAATCTTTCACAAAATATACCGTCGCAGATGACGCCGAGCAGTTTGCCGCCAAACGTACCGAATATGGGACCAACGAATCTACGTCACGTAACCGAGAGCTTGCCAACTTCGGCACAAGCACTGCCGCAAAGCATGACGGGACCGCCACCGTTGAATCTCAATATTTCGCAGAGCGTGTCGGCCGGTATCGGTGGCCCAATCGGCCAGATACCGCAGATGCCACCAATGTCGAGTTCACCACCGCAACCGCTCGGTTTGACTGTAATGTCGTCCGAAAATAGAAATGCTGAAAGAATGATGGACGATAGACTATCAGTGAACGATCGAGTACGCGACAGCAGAGCTCCTGACTCTCGTATGATGCCAGAGCGTGTTTCGGAACGAACAAGTGAAAACAATGAATCGGAACGATCGGAACCGAGCAACTTGTTTCAGCCGATACAATCCGGTGGAATGTTGTCGATGGAGAAACCCGCGGGGATCTATAATTTACCGGCTGGTACACCGCCAATGGAGCCGCAAAATCTAAAGATAAAGCAGGAGATCATACCACCGGAGCCGGATCCTTTGCAAAGCTTGAAGGAGGTCAAAGTACCAGGCTTCCAAAGCTCCAATTTTCCAGGTCCGAGTTTGGACAATATCAAAAAGGATCCAGATGGCGCAAGCAAACCGCCAACGCCAAGCAAACACTCTATGCCGCCAGTTAGTCAGGCGGTACCGTCGATTCAGCCAGTTGCGGCATCGCCGACACCAACGCCGAATCTTCCGCCGCCACCAAGCTCGATCCCTCAACCGGTAATGCATCCGGCGCAACAGCCGAGCCCGCATATGGCCCATCCTTTCCATCCACATCATCCGCTGATGCATCACTCTTTGTTCACCGCTATGCATACGTATCATCCTCATCCTTATCCAGGATACGCACCAGGATATCCATCTTTCCCGCCATACGCTTATGGTCCGGTACCTCATGCTATTCCTCCACCTTCGCCGCAACGAAGTCAGGAAAGCAGTAACGCTATGATGACGGCGCATCATGCCAGTACTAGCTCAAGTGTCACCAGCAGAGAAGAGGGCGAGAATCTAATCGCGAGTCATCACCATTCATCTAGTATGCATCAACAGCCGACGAACTTGCATCACGACAAACTATTGACTATCTCTTCTCACAGTTCTCATAGTCATTCGTCGTCCCACAGCTCACACAGTAGCCAGCGGAAACCGTCACTCGTCTCTGCTACATGTCTAACGTCGTCGGCTAGTTCcgtgcatcatcatcatcgtgcGTCACAACCGCAGCAACCACAACCAGTCGTACAGGAACCGAAAATTGAACAAGACATGGAGACCGAACCTGAAGAGCCCATTAGTCCTCGTGGACCATCGCCAGAACCGCGAATTGAGGATTCCGAGTGTCACCGTTCGCAGTCTGCGATTTTCCTGAGACATTGGAATCGCGGCGAAAATAACTCGTGCACGCGTActgatttaatgtttaaacCTGTACCCGATTCAAAACTTGCAAGAAAGCGCGAAGAACGCTCGCGGAAACAAGCAGAACGAGAACGAGAGGAACGTGATcgcgctgctgctgcagctcaACAAGCTAGAAAAATGACGACACCGGAGAAACAACCTGAAGTATGCAAACCACCCAGCCGCGGACCCCTCGAACCGGTCGTCTCACCATACGATCGTTACGCCGCGCGTCCTGGTTCTTATGCAGATACACCGGCACTCAGGCAACTGTCCGAATATGCTAGACCGCACGCAGCTTTCTCACCTGCCAGACATCCCGCTCCGCCTGATCCGATGCTACATTACATTTACGGACGCGAAGCTGCAGCAGCGCAACGATTGGAGTTGGAACATATGGAGCGCGAAAAGAGAGAACGCGAGATACGCGAATTACGCGAGAGGGAGCTGAACGATAGATTGAAGGAAGAGTTGTTCAAGGGTACGCCCAGACCGATGCCGGCACCGCCGGTTGATCCACACTGGCTGGAGATACATCGCCGATACGCCGCTGCCGGTCTGACACCGGCTCCTTCTGGACCACCCCAGGCCTTACATCAGTTTGGCCTCTACGGCGCTCCACCAGGTCCAAGTCAACTCGACAGAGAACGGCTTGAACGGCTAGCTGCGGCCAGCGCTAATTATCCTCGTCCCGGTTTAATGCCGCGGGATCCTGCTCTGGCACTTCATCCGGCGGAACTTCTAGGAAGACCGTACGCGGATATGGCGGCGCATCACGAACAACTACAACGGCATCTTATGATAGAACGCGAACGATTCCCTGGGCATGCATCTCTCGTGGCTCATCACGAGGAATATCTGAGGTTCGTAGGCATTTga
Protein Sequence
MALDGDLLMYLRAARSMAAFAGMCDGGSPDDGCVAAARDDTTINALDILHDSGYDPSRALQALVKCPAPKGIDKKWSEEETKRFVKGLRQFGKNFSRIRKDLLPHKDTPELVEFYYLWKKTPGANNNRPHRRRRQSSLRRIRNTRNSRAGTPKEEIPTPTKDTPPAVNLSTKETASEVETVPVGTPASHNPGGEISSVTEDDNSEEDSDSRDTNTNGATHSCQHCFSSSSKDYQVAGKDRLLLCAECRAHLKKTGELPPLQPYLFRPVPAESPESPGRMRTRNKAKETPRPARPRRTGGGTDTPDQEKQQQQQTPDKNKKKSSGKADTPKKGHKRSSQTDDTCNDEDKEAQKRKRGGGERPDSPSESLTTDSNSLMDEPERETEGDANENQPTPPTVAGVTGGEEPVSSPAVTTPEEPSEPTPASTPVPTTIQSLPISVPVIHNLEKKPSVLLDQESIDQNKISDQTEDVPLVMNQALKLEPLPIESTMSPTMSNEDMGKEPETTQLNLSTSAQSVGTGPSDTASPTVTVRNLSQTIPSIITSVGSQAAISSSQIPVISPGQQQTGTAGGLPTSLSMQYVQPPPPPPPPPVQNVPQNLSQNIPSQMTPSSLPPNVPNMGPTNLRHVTESLPTSAQALPQSMTGPPPLNLNISQSVSAGIGGPIGQIPQMPPMSSSPPQPLGLTVMSSENRNAERMMDDRLSVNDRVRDSRAPDSRMMPERVSERTSENNESERSEPSNLFQPIQSGGMLSMEKPAGIYNLPAGTPPMEPQNLKIKQEIIPPEPDPLQSLKEVKVPGFQSSNFPGPSLDNIKKDPDGASKPPTPSKHSMPPVSQAVPSIQPVAASPTPTPNLPPPPSSIPQPVMHPAQQPSPHMAHPFHPHHPLMHHSLFTAMHTYHPHPYPGYAPGYPSFPPYAYGPVPHAIPPPSPQRSQESSNAMMTAHHASTSSSVTSREEGENLIASHHHSSSMHQQPTNLHHDKLLTISSHSSHSHSSSHSSHSSQRKPSLVSATCLTSSASSVHHHHRASQPQQPQPVVQEPKIEQDMETEPEEPISPRGPSPEPRIEDSECHRSQSAIFLRHWNRGENNSCTRTDLMFKPVPDSKLARKREERSRKQAEREREERDRAAAAAQQARKMTTPEKQPEVCKPPSRGPLEPVVSPYDRYAARPGSYADTPALRQLSEYARPHAAFSPARHPAPPDPMLHYIYGREAAAAQRLELEHMEREKREREIRELRERELNDRLKEELFKGTPRPMPAPPVDPHWLEIHRRYAAAGLTPAPSGPPQALHQFGLYGAPPGPSQLDRERLERLAAASANYPRPGLMPRDPALALHPAELLGRPYADMAAHHEQLQRHLMIERERFPGHASLVAHHEEYLRFVGI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00633569;
90% Identity
iTF_00729995;
80% Identity
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