Cnig037651.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- kn
- Assembly
- GCA_004329405.1
- Location
- SJPC01001184.1:3654-7157[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.7e-63 2e-58 200.1 16.2 288 563 1 270 1 281 0.68
Sequence Information
- Coding Sequence
- ATGCTAGTTTGGAGCGAGTTTATCACTGCACATGCAATCAAAGTACAGGCACCGGCACGACAAATACCCGGCGTCGTTGACGTCACGTTACATTATAAAAGCAAGCAATTTTGTAAAGGAGCGCCCGGTAGATTCGTTTATGTCTcggTGAACGAACCAACGATCGACTACGGCTTCCAAAGGTTACAGAAACTCGTTCCGCGGCATCCGGGTGACCCCGAGAAACTTCCCAAGGAAATAGTACTAAAACGGGCGGCGGATCTAGCAGAAGCCATTTATAGTATGCCCAAGGGCGGAAATATGGGGATCACGGGGGCACCCAGAAGTCCCGGTTCGGTACATGCTCCCGCGCCTCCTACATCAAGTTCGGCAACGGCCTTTAACTCGTATACAGGGCAGCTCGCGGTGACGGTGCAGGAGAACGGTAGCGCGGCGAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCTGCTGCCGATGGaggtggtggcggcggcggcggcggcggcggcggcggcggcagcggtgGCAGCGTCGGTGCCAACGTCGGTAGTAGCACCGATGCCTATAGACAAAGTAGCAGTGCCAGTCCACGTGGTGTCGTAACTGGCGGTGGTTATTGCGGTAGTTCGGCCAGCACACCACATAGTCACAGTACCAATGGAAGTTACTCTGTCGCCAATCCGTACACCGGCAGTCCGACTCTCTACACATCGCCGCACGAACAATATGGCATATTCTATACATCCGGGGACGGGAGTGCGTTCGCCCCCGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGTCGCCCAGTAA
- Protein Sequence
- MLVWSEFITAHAIKVQAPARQIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEAIYSMPKGGNMGITGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGAAADGGGGGGGGGGGGGGSGGSVGANVGSSTDAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATVAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -