Cnig041439.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- kn
- Assembly
- GCA_004329405.1
- Location
- SJPC01029759.1:2-775[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-82 1.2e-77 263.5 0.0 247 388 13 156 9 183 0.94
Sequence Information
- Coding Sequence
- TTGGCACTCCTAACGAGCGTTGTGTTTGCAGCAGCGTCCTTCGCGGCAGCACCCTGTATCAAGGCAATCAGTCCGAGCGAAGGCTGGACCTCCGGTGGCACCAACGTAGTCATCCTCGGCGACTACTTCTTTGACGGCCTTCAAGTGGTCTTCGGCAATGTCACCGTTTGGGCTGAGTTACTCACATCGCACGCCATCAAAGTGCAGACGCCCCCTCGAAACGTGCCTGGAGTGGTGGAAGTGACTCTGTCATACAAATCGAAACAATTTTGCAAGAGTGCCCCCGGTCGTTTTGTTTATGTCTCAGCTCTAAACGAGCCAACCATCGACCACGGGTTTACCCGATTGTCCAAACTTATACCCCGCCACCCTGGTGATCCAGAAAAGCTTTCAAAGGAAATCATACTGAAGCGAGCAGCAGACTTGGCCGAGGTGTTCTACAGCGGCATGCCGCGCAACACGCCATCGCTGCCGCCGCCAAGGTCGCCGGCCAGCATGGCGGCTGCCATGTCAGGCTTCAACGCAGCCTATGCTGCCAGTGCAGGTCAGCAATTGCCCGCCACCGAACCACA
- Protein Sequence
- LALLTSVVFAAASFAAAPCIKAISPSEGWTSGGTNVVILGDYFFDGLQVVFGNVTVWAELLTSHAIKVQTPPRNVPGVVEVTLSYKSKQFCKSAPGRFVYVSALNEPTIDHGFTRLSKLIPRHPGDPEKLSKEIILKRAADLAEVFYSGMPRNTPSLPPPRSPASMAAAMSGFNAAYAASAGQQLPATEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00280397;
- 90% Identity
- iTF_00280397;
- 80% Identity
- iTF_00280397;