Basic Information

Insect: Cataglyphis niger
Gene Symbol: JARID2
Assembly: GCA_004329405.1
Location: SJPC01003029.1:13029-22125[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.6e-23 6.4e-19 70.0 0.1 6 89 1348 1429 1344 1429 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.6e-23	6.4e-19	70.0	0.1	6	89	1348	1429	1344	1429	0.94

Sequence Information

Coding Sequence: ATGGTTCTGAATCGTAACGacaagaggaagaggaaagagGGAGATCTGGTGGATCTTATGGAACCACTTTCAGAATCTCCAAAGAgAACCAAAGTCCACGcacaaagaaaatttgcaCAAGGTGCAAATACAGTGTTCAATACATCACCTACACCTGTCAAGGATAAAGAGAAAACTAAACCTGCCATGATGACAGAATTAATAACTCATAAACGTCCAAATACTGAGGACtttctaacatttttatgttttagagGAACATCCATTTTGCCACCCAATTTGAATTTCTTCAACATTagtaacaaaaaagagaaacaaaggCCTATATCAGCTCGTGCTTCTGCAGATAAGATATCATCCTGTACTAGCACTTCTACAGAAGTTCAAAAACAAGACACATGTCAGAAAAATGTGACAAAAGTAAAACCTGTTGTcccagataaaaaaaaagtgcctaatacaatacacaaaaatatcacCAAACTTAAGACAGCAACATCTACAGTTCAAGcacttaaaaagaaatatcaagaACAACGTCTTGCTAAACAGAGGAtcaagaataaattcaaagCCACATGTGTTATGAGGACACGATCATGTACAGAGAGATCTATGATGAAGGCTGGTATTCAAATGGCGCCGAGAAAATTCTTACCCggaattgaaacaaaaagacATGGTTTGAGAAGTGGTGTACTGCCAGATAAAAGCAACAAATCTTTATCAAAGACAAAAATTGTGCCACCCAAACCCAAGAAGAAAGTTAAtctaaaactgaaaaataatgatacattatatacagatatatctGAAGATGAGcatgatgaaaaagatgatgaagaagaagaattactTGTGGAAAAATCGACATCACAAATGAAACGTAACATACAAAAAGGgattcaaaaaaagatttgtacCAGAAGCAAATCAGAAATGAGAAGAGTTACAAGATCACACAGTGGTGTAATTTCTTCGCAAAATTCCTCCAGGAGACCTACCAGAAAAACTAAGGAAGCAGCTGCTGTGTATATGGAAATTCTTGGTAGAAAATTAGTGAGCCCGGATCTAGAGAATGAAGATAACATTTCAATCGAAAGTTTTCCCGAATTACCAAATGCTCGTAGGATAGCGCAAACGGAAAACGAGCTTAAAGCCAAAATAAAACAGACTAATACGAAAACTGTTAGTAAAACTAAGGATTCTAGGGTTAATTCCTTCAATAGTCATGGTAATAAGCGATTAGATAAgagcaaaaacaacaaattaattctaaaaagcAAACGTCTACTGAGAGTTCAGAGATATTGCGAGGAAGATAGCGACGAGGAATCTGAAAGCTCGATAGAAACAAATACGAGACCTATTACCAGACAGAGTCTCGGAAAACTTGACAAACCAATCGGTAGGAGTCTCAGATCGTCCTCCAAAAATACAACTGTACAAGCAGAAGTACAAAGTAACACAAATAACAAAGCGAAGGTCCAAGTTCAAAATTGTATGAAATCTGCTAGggaaaaatttgtaatgaaACGCAAACGTGATCAAAATCTATCTAAAACTTCATCATTAGATAAGATTAGTGAATCGAAAcagaaatgttttaaaaatgatcagaACAAAAACGTGGAATCCGAAGAGGAAACATTGGGAATGTtgcttaataaaatgaaaaagaaaaaagagaatgatgaagaagaaaaaatttcggataatattaataatacgaaaGATAGCGAGACAATTTCCAATGATACACAAAACACGAATACGAAACCAGATTTGCCAAAAGTATCAGACGATGAAGAATCATTTCGCGGATTTACTAAGAAAGCGATATCAAAAGTTTTGAATTCGTGTCATGCTAAtgttaatctattaaaatcagaatccagtgacaaattaaatataatcaaaacgTTGGAAATTCCAAAGCAAACAGTGAATCAGAGCACAAcattacaagaaaataataaagaaaagactTCATTGGTTGAAACTGGTTCCTCAgtcgcaaatatattaaatgatgaatacaGAATATctatgcaaaatcaaaaatcaatattagatTTGTCCCTCAAGTCACAAAGCTCCTTATTACCATCGATTGAACAAGTACAGAGTAAAAAGTGTAATCATGAAAACGAGATTTCTcctaatcttataaatatgcCATTGTCGACTCTACACACAAGAAAAGAGCGAGTGAATATGTCGACTGAGCAAATAGAGAAGTGGCTGAACGAAAGTTCACTTGCCAAAGAAGAAAGCAAGTTAGAAATGGAGAATGTTGTTACCTTCAAATATGAGCCTGCGGAAAAGTTGAAGTCAGATGTCTCGCATTTATCTATCTCGACAAAGATTCAGCATCTAGTACGTCCCGTCAATGTAACACTTTCAAAATTAGCGGAGAAGATGAGTTTGAAGGACCGTACTACAATCATACAGAACAGAAATGTGATACCAGTAACATCCGACGTACATAATGTCGAAGCGAAACAGAATACTgccaataaaaataagacTAATACCGAGTTTGTGAAGGAAATTGTTAAGAATAAATGCGAAAAGATAAGTAAGGATACTGTTCTCGCTGAAGATACTAGCGATACTGTGTCAAAGTCGGATCAAAATTCGACGGACGGTTCTGTAGAGAAGAAATCACCgatggaaaagaaaatatttcaaccgCGAAAATCTTTTATACCTAAGGTTAAACGTAAGTTGGTAATTCCGAATGCTAATGCATTTTCACCAGAGAATGAGAGTAGCGTTTATGCGTTTGAAAGTGATACCGAGATTCCCATTAATACACCCTTCAGAAGAAAGATGAAAGATACCATGAAGTCAACAGCCGCAGAGACTAAAGTAATTACTGAAactgataaatcaaattttaaggATAATTGTGGAGCATCAATGGACGGTAAGGAGAAACCGCTGACTGATATTGAAATGCTTGCGAAGAAAGAACAAGAGACACAAGGCCCGATAAGCACAACGAATACAACACTGAATAAGTTTGAACTGCCCAAAAATTTCGCAGGCTTAACGAATGTCCAAGTATTACCGCTCGATAAACTCACGACGAGTTGGAGCAACGTAAACTGCAGTGCTTCTATAGCAGTGCAGGTAAATCTCGACGAAACTACGCAAGAGCAAGAGAATGTCAATGATACGAATCAGCAAAAGAGTACCGAGATATCTACTCAGACCGAAACGAGTAACGAGAATGATGACGACAATGATggacaattattttacataccgTTACAAGCTGTTACGAGGAGCGGCCCGAATTTGGTACAAGGGCAACAATTGATACAAGGTGTAGCTGTTAAACTTGGCACGGAAGGACCGACTGGTCCTAATCAAAGAGTACTACTTCGGGCTAAATTGGTCACTAAGCCACCATTATCTATAGCGCGTTGTCCACCGATAGGAACGGTACAGCCGACAACACGTACTCCACCTAATCCTACGACAATTGAGCAACAACAAGGTCCGTCAACCTCAACAACCACAACTGTTTCGACCACGGTAACAAGTACGCCGGAGATACAGCCGATATCACCAGTGAAGAATGACATCTCGGTGCCAAACTTGAATCGTTCAAATGTCAGTACGAGCTCCAACAATTTGGAGAAACTTACGAAGTCTCCAAAATTATCTAGGGAAAGAAAAACTTCTATAGATTCGGCAAAAAGTAGCAAGaggaCGCAAATGAAATGCAAACAGAAAACACCTGAACTATACTCCTCAAGTAATAACACAACGTTTCCAAGTGCAAAAAACGCAAATGATGAAGCTCGCGTAGTCGAAGCACCGACGTTTCATCCGACGGAGAAAGATTTTCAGGATCCTTTGGAGTATATAGACAAAATAAGACCGATTGCCGAGAAGTTTGGAATATGTAGAGTCGTGCCTCCGccaaattttaaaccaGAATGTAAGGTATCTGATGACATGAGATTCACTGCTTATAATCAATATGTACATCGCATGCTTCATAGATGGGGTCCTAATGTAAAAGAAATGATGgctattaagaaatatttagcCACTCAGAGTATTACTTTAACTCAACCACCATGgatTGGTGGGATGGAAGTTGATTTACCTCACTTATATCAAACAGTTCAAAACTTGGGTGGATTAAAAGAAgttattgaaaagaaaaaatggcaAAAGGTAGCAGATGGTATGAAGATACCTAAATCTGCACAAGATCGTGTTACCAAATTGGATGATATTtactgcaaatatttattgccaTATGATACATTATCGCcagaggAACGCGAGAAATTGTTTGACGAGGTTGAAGCTGAATGGATAAGAAAGGAAAGCAAAACTTTGCAAAGGCAGGAAGCGTCATccaatgataatgatgaagaagaagaagatgacaGTTCCGATGAAATTGAGGAATGTATTGTAAAGggAAGAAACATGCCCTTGAATGCTTTTTACCGAATTGCCCGTAATACACAACGTATGTGGTTCGGCGAAAATCAACGAGGAAATGAAGCCGAAGGTGCTTCAGCTGATGAGGTGGAGAGTGCGTTTTGGAAACATGTTGCCGAAAGAAAACGTCACGTCTGTGTACACGCAGCGAGCATCGATTCAAGCGGTCGTGGATTTGGCTTTTCCGTTGCCAAAAACAGCCCGTTCGCCAGACATTCCTGGAATCTCAAAGTACTCACGAATAATGCCGGATCGGTATTGAGAGCCTTGGGCCCGTTAATGGgTGTAACTGTGCCAACACTGCATGTGGGTATGTTGTTTAGTGCTTGTTGTTGGTATCGCGACCCACATGGGTTGCCATGGATAGAATATCTACATACAGgtgctaaaaaaatttggtaCGGAATACCTGATGAACATAACAACAATTTTCGAGAGGCGCTCTCGAAGATGGTACCacgatattgtaaaaataaaactatatggTTACCTTCCGACACTGCCATGGTCCCACCAGAATTGTTAGTCAGCAACGGTGTGCCGTTATGTAAGACAGTGCAAGAGCCGGGACAATTCATAATTGTATTTCCGAAAGCATTCACGTCGAGTATATGTACCGGTTACGTTGTATCCGAAAGTGTGTATTTCGCACAACCATCTTGGTTGGAAACAGCCGAACAAGTATTCAAGGACATACAAGATAGTTGTGAACCTTCTATCTTTTCATTtgagagattattatttaatattattaatgataccAGATctcatatagatatattaaaacagatattgcCGAGCGTGATCAAGATCCGTGAGAAAGAGTTGGATTATCGTAAACAATTGGAAAATGTGGgtcttaataataaagaaagattacCTCTGCCAGATAgtggaaaaggaaagaaaggaaaaagagtGAAAGAGGATGATGGCGATTTTGAATGTGAGACATGTAGAGCCAATTTGTTTGTCTCATTGATGAATAATTCGCAAGATGATAGTGTCTACTGTTTGCCGCATGCATTGCAGTTAATCAATCATAAAAAGCAGATTTTGAAACATTGTACTTTAATGTATACCTACGACGAAGACGAATTAGATGGATTGATTCATAAACTGGAATACAGGATCGAAGCCAAATctaaaaaaactaatcaaataaaacaaaataagtaa
Protein Sequence: MVLNRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGANTVFNTSPTPVKDKEKTKPAMMTELITHKRPNTEDFLTFLCFRGTSILPPNLNFFNISNKKEKQRPISARASADKISSCTSTSTEVQKQDTCQKNVTKVKPVVPDKKKVPNTIHKNITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKATCVMRTRSCTERSMMKAGIQMAPRKFLPGIETKRHGLRSGVLPDKSNKSLSKTKIVPPKPKKKVNLKLKNNDTLYTDISEDEHDEKDDEEEELLVEKSTSQMKRNIQKGIQKKICTRSKSEMRRVTRSHSGVISSQNSSRRPTRKTKEAAAVYMEILGRKLVSPDLENEDNISIESFPELPNARRIAQTENELKAKIKQTNTKTVSKTKDSRVNSFNSHGNKRLDKSKNNKLILKSKRLLRVQRYCEEDSDEESESSIETNTRPITRQSLGKLDKPIGRSLRSSSKNTTVQAEVQSNTNNKAKVQVQNCMKSAREKFVMKRKRDQNLSKTSSLDKISESKQKCFKNDQNKNVESEEETLGMLLNKMKKKKENDEEEKISDNINNTKDSETISNDTQNTNTKPDLPKVSDDEESFRGFTKKAISKVLNSCHANVNLLKSESSDKLNIIKTLEIPKQTVNQSTTLQENNKEKTSLVETGSSVANILNDEYRISMQNQKSILDLSLKSQSSLLPSIEQVQSKKCNHENEISPNLINMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVVTFKYEPAEKLKSDVSHLSISTKIQHLVRPVNVTLSKLAEKMSLKDRTTIIQNRNVIPVTSDVHNVEAKQNTANKNKTNTEFVKEIVKNKCEKISKDTVLAEDTSDTVSKSDQNSTDGSVEKKSPMEKKIFQPRKSFIPKVKRKLVIPNANAFSPENESSVYAFESDTEIPINTPFRRKMKDTMKSTAAETKVITETDKSNFKDNCGASMDGKEKPLTDIEMLAKKEQETQGPISTTNTTLNKFELPKNFAGLTNVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEQENVNDTNQQKSTEISTQTETSNENDDDNDGQLFYIPLQAVTRSGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSIARCPPIGTVQPTTRTPPNPTTIEQQQGPSTSTTTTVSTTVTSTPEIQPISPVKNDISVPNLNRSNVSTSSNNLEKLTKSPKLSRERKTSIDSAKSSKRTQMKCKQKTPELYSSSNNTTFPSAKNANDEARVVEAPTFHPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVEAEWIRKESKTLQRQEASSNDNDEEEEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNEAEGASADEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHSWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVPLCKTVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKIREKELDYRKQLENVGLNNKERLPLPDSGKGKKGKRVKEDDGDFECETCRANLFVSLMNNSQDDSVYCLPHALQLINHKKQILKHCTLMYTYDEDELDGLIHKLEYRIEAKSKKTNQIKQNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423428;
90% Identity: iTF_00109614;
80% Identity: -