Cnig044188.1
Basic Information
- Insect
- Cataglyphis niger
- Gene Symbol
- grh
- Assembly
- GCA_004329405.1
- Location
- SJPC01000127.1:51958-87222[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-62 6.9e-58 197.5 0.0 29 221 563 757 547 759 0.93
Sequence Information
- Coding Sequence
- ATGCGACGGCGCGATATCGATCGGGACACAAACCTTAATTTCCAAGATATATCGCCGACTAAACACGGACATGTTCTCCGTGGCGGTAGCCGCGCCCGATACACCAGCAATTACTCATCCCGGAGGGACAACGAGGAACGCAAAGCCCATCAGCGAAAGATAACTCGGGTCCTCATTATCGGGGTGGTTGGTCCTTCTCTCTCAGGGGCGACGGTTGTCCAGGTGCGCAAGGAAGATCGTAGAAGGAGTAAAAGACATAGCGAGGAGGATACAAACGGCACCGTTGTCAGCGACGacgcacagcagcagcaggactACGTATCCGGGCAGCGTGAAccggaagaagaggaggaactGGGAGCGGAGGAGGCGGCGGCCCAGGCAGCGGCACAGTCCCTGCAGAGCGGTGCCGAAGACGCCGACCCGGAAGTCCACAAAAGAGTCGCGGTGCAGGTGCAGGTGCAGGGTATGGAGGGCGACTGGCGCGCCTACTGCGAGCATCCGCTCTCAGTGGCGACCGCTGCTATGCTAAATctccagcagcagcatcaggtGTCGGCGGTAGCCAGCCATGGCGACGATCCTGGCGCGTCCTACGTCTACGAGTATTACAAACTGCCCGAGAAAACGACCGCGGATGTCAAGTTGCCGCCCACGCACGAGCTCTGGTCCACGGGTGTGATGGGCCAGAAACTGCTGGTGCAGGAGGCGCCTGGCTCCGGTTCCGCCTCGACGAATCGCATGGAAGGTGGCGAAGGTGCCGGAGGAGGGGAGCTACATCACTTCCTCCATCAGTACAACCAGCAGTCCCACAGTCCCGGCCAGAGCCTGCAGGGTGGCCTTCCGCTTCCGCTGAGCCCGCAGTCCCTGCGACACGACGGTGCCGCGAGCGCCGGCATCGCCGGGGTCAAGAGGGAACCGGAGGACCTCAGCTCGTCGCGGGCAGGTCAACAATCGAGCAAACGGCATAAGCAGGAAAGTCCAACACCGCCGGGAATgtaccatcatcatcagcatcagctACAGGTGCAGCAGTACGGCAGTCCCTACGATCCCTACACGTCCTGCAGTCCACGGCTACAGTCGACCGCGTACACGTCCACGTCGGCGACCGGGACCGGAAATGGGACGAATCCCGGAGGCGGCGGCCTCCATCAGGAGGCGACGACGGTCTACGTCGCCGGTGACGCGCTGCCGCCGCTCGCCTCGTCGAGCTCCGCTTCCTCGCTGTCCACCACGACCGCTTCGTACACGAGGTACGAAGTTGTGCCGAGCTCATACACTACGACACACGCGATACGCTCGTCGTCGAGTAGCAGCAAAGTCCTGACCGTCGATCTTCCCAGTCCCGATTCCGGGATAGGCGCCGACGCCGTCACGCCGAGGCAGGATCATCATCCGCCCACGGCGCTTCATCAGtcCTCATTTGACTACACGGAATTATGTCCTGGTGGGACGACAGCCGGAGCGGCGGTGGTCCTCGAAAGCGGCGCCGTGATACACCATCAACCCCTGCAACTTCAACTACAGCAGAGCCACGCACAGGCACAGGTGCAACGCAGCAGTCTCGTGTCCGCAGGTGCGACAAATCCGAATCCGAATCCGCCGAGGTCGCGGCCTTGGCATGACTTTGGTAGACAGAACGACGCCGACAAGATCCAGATACCGAAAATTTTCTCACCTTACGGATTTAAGTATCATCTGGAATCACCGATCAGCACGTCGCAGCGCCGCGAGGATGACAGAATAACGTATATCAACAAGGGCCAATTTTATGGTATCACGTTGGACTATGTGCCCGATCCTGACAAACCACTCCTCAAGGCAGGACAAACGGTCAAGAGTGTGGTAATGTTGATGTTTCGGGAAGAGAAGAGTCCGGAGGATGAAATCAAAGCTTGGCAGTTTTGGCATGGCAGACAGCACTCTGTTAAACAACGGATTCTTGATGCTgACACAAAGAACAGCGTCGGTCTGGTGGGCTGCATAGAGGAAGTCGCGCACAATGCGATTGCCGTTTACTGGAACCCACTCGAATCGTCAGCGAAGATAAACGTTGCGGTGCAGTGTCTTAGTACCGATTTCTCGAGTCAGAAAGGCGTGAAGGGTTTGCCGCTGCATATCCAGGTCGACACGTACGAGGAATCGCCGCCTCACACGCACACGTACACGCCACCATCCCATCGGGGCTACTGTCAAATTAAGGTCTTTTGCGATAAGGGGGCAGAGAGAAAGACCCGAGACGAGGAAAGACGCGCGGCCAAGAGGAAGATGACGGCGACTGGCAGAAAGAAGCTCGACGAGCTTTATCACTCTGTCACGGAGCGCAGCGAGTTTTACTCCATGGTCGACCTGCATAAACCGCCGGTGCTGTTCTCGCCGCCGGCCGAACACGCCATCGACAAGTTCTCGACGATGGAGTTGTCGGGCTTCTAcggtggtggcggcggcgggggCGGGGGTGACACTGACACCTCGTCCCTCAGTAACGGTGAAAGTGGAGGATTGAAGGCGGGGGGTAACAGCCCTTATCCGGCGGCATGCGGCCGATCGAATCTACCGGCCCTCAAGTTCCACAACCACTTTCCACCCGACAATCTCAGTAGCCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTGCAGGGATCGGTGCTGCAAGGGGTGCAACAGGCCGGCTTAGCGAGCGCTGTGATATCCAACAATCGGCTTCACTTGCAGCAACAACCGCCGCATTTACGCCCGAGCGACGCCGAGGAGCGCGTAATGCTGTACGTGCGTCAAGAATCGCAGGAAGTCTTCACGCCGTTGCATGTTACGCCACCGACGGTCCAGGGATTGCTCAATGCTaTTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGATATGATCCGATATTACGTGGACGAGGACCTGTTCCTGCTAGAGGTCAGTCACTCGCGGATCAATCCGGATCCTGGCAGCGAACGTAATCCGAACTCGCCGGGCGATCCCGGTGATCCGGGCGATTCTCCCTCTACGGCTGGATACGACGTCACCCTCATCGAGCTATCTCATCCTCCACCATTGCCGCACTCACCCCTCGCCAATTCCACGCATGCACACGCTCACATTCACGACAATAGTAACACGTGA
- Protein Sequence
- MRRRDIDRDTNLNFQDISPTKHGHVLRGGSRARYTSNYSSRRDNEERKAHQRKITRVLIIGVVGPSLSGATVVQVRKEDRRRSKRHSEEDTNGTVVSDDAQQQQDYVSGQREPEEEEELGAEEAAAQAAAQSLQSGAEDADPEVHKRVAVQVQVQGMEGDWRAYCEHPLSVATAAMLNLQQQHQVSAVASHGDDPGASYVYEYYKLPEKTTADVKLPPTHELWSTGVMGQKLLVQEAPGSGSASTNRMEGGEGAGGGELHHFLHQYNQQSHSPGQSLQGGLPLPLSPQSLRHDGAASAGIAGVKREPEDLSSSRAGQQSSKRHKQESPTPPGMYHHHQHQLQVQQYGSPYDPYTSCSPRLQSTAYTSTSATGTGNGTNPGGGGLHQEATTVYVAGDALPPLASSSSASSLSTTTASYTRYEVVPSSYTTTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGTTAGAAVVLESGAVIHHQPLQLQLQQSHAQAQVQRSSLVSAGATNPNPNPPRSRPWHDFGRQNDADKIQIPKIFSPYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKAWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEESPPHTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHSVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGESGGLKAGGNSPYPAACGRSNLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQGVQQAGLASAVISNNRLHLQQQPPHLRPSDAEERVMLYVRQESQEVFTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSRINPDPGSERNPNSPGDPGDPGDSPSTAGYDVTLIELSHPPPLPHSPLANSTHAHAHIHDNSNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01089761;
- 90% Identity
- iTF_00729832;
- 80% Identity
- -