Basic Information

Gene Symbol
Iswi_1
Assembly
GCA_004195275.1
Location
SGAY01007898.1:1142-4174[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-06 0.0032 18.3 0.0 3 41 799 838 798 838 0.96
2 2 0.0041 7.8 7.4 0.0 3 21 901 920 899 923 0.90

Sequence Information

Coding Sequence
ATGTCCAAGCCAGACGAAAATGCGGACACTGGCGATACCGGAGATAACTCGAACGGGTCTTCGGCAGAGACCACGTCATCGAGGGGTGGCGATTTTGAGACGAAACTCGAGACCGATCGCAGCAAACGATTCGATTACTTACTGAAACAGACCGAGATATTCTCGCACTTTATGACAAACAATCAAAAGGATAAAGCTGGTAGTCCGTTGAAGATCAAAGCTGGCAGACCTAGAAAACAACAACCGGAGAATCAACCTAAATCAGATTCGGGCGATCACAGACATCGTAAGACCGAGCAGGAGGAGGATGAGGAATTATTAGCCGAGAGTAACGCCAGTGTGGCGCCTACAACGCGCTTCGAATCCTCGCCACATTATATCAAGTCGGGTGAGTTGCGTGATTATCAGATACGAGGTTTAAATTGGATGATATCGCTCTACGAGCATGGTATAAACGGTATTCTGGCGGACGAGATGGGTCTAGGTAAGACACTACAGACTATCTCCCTGCTCGGATACATGAAACACTTTCGAAACATTCCTGGCCCTCACATTGTCATTGTTCCCAAATCGACACTGGCTAATTGGATGAATGAGTTTAAAAAGTGGTGTCCCAGCCTCAGAGCTGTCTGTCTCATCGGAGACGCAGAGACCAGAAATACTTTCATCAGAGATGTAATGATGCCTGGTGAATGGGACGTGTGCGTAACGTCCTATGAGATGGTAATCAAGGAAAAATCGGTATTCAAAAAGTTCAATTGGCGTTACATGGTAATAGACGAAGCTCACAGAATAAAGAACGAAAAGTCCAAGCTGTCGGAGATTCTCAGGGAGTTCAAAACCACCAACCGGCTTCTGTTAACAGGCACACCGTTGCAAAATAATCTTCACGAGTTGTGGTCCCTGTTGAATTTCCTTTTGCCGGATGTATTCAATAGTTCAGACGATTTTGATTCGTGGTTTAATACAAATAGTTTTCTAGGCGATAATTCATTGGTTGAGAGGTTACACGCAGTCCTGAGACCATTTCTCTTGAGGCGTTTAAAGTCTGAAGTGGAAAAAGGACTCAAACCCAAAAAAGAGATCAAAGTGTACATTGGTCTGAGTAAAATGCAAAGAGAATGGTATACCAAAGTATTGATGAAGGATATAGATATCGTGAACGGTGCAGGAAAAATAGAGAAGATGAGACTGCAGAACATTTTGATGCAACTGCGTAAGTGTTGCAATCATCCGTATTTGTTCGACGGCGCCGAGCCCGGACCGCCATACACTACTGACGAGCATCTCGTCTATAACTGTGGCAAAATGGTAATACTCGATAAATTATTGCCGAAATTACAGCAGCAAGAATCTCGAGTTTTGATATTCAGTCAGATGACGAGAATGCTTGATATTCTAGAGGATTATTGTCATTGGAGGTGTTTTCAGTATTGTCGGTTGGACGGCAACACCGCCCATGAGGATCGACAGCGACAAATCAACGAGTACAATGCACCCGGTagcgagaaatttattttcatgttgTCAACTCGCGCTGGTGGCCTAGGTATCAACTTGGCAACTGCTGACGTAGTCATCATTTATGATTCCGATTGGAATCCGCAAATGGATCTGCAAGCGATGGATCGCGCACATCGTATAGGCCAGCAGAAGCAAGTGCGGGTCTTCAGATTTATCACGGAGAACACGGTAGAGGAAAAAATTGTCGAACGGGCCGAGGTGAAGCTGCGCCTGGATAAGCTCGTTATTCAGCAGGGACGACTTGTCGACGCCAAGCAAACAGCATTGAACAAGGATGAAATGTTGAACATGATCAGGCACGGCGCAAACGAGGTGTTTGCGTCCAAGGACAGCGCCATCACTGACGAGGATATAGACACTATACTGCAAAAGGGTGAAGCAAAAACGGAGGAAATGAAGCAAAAATTGGAGAGCCTGGGTGAGTCCTCGTTACGGAATTTTACTGTCGATGCACCGACCGATTCTGTGTACCAGTTCGAAGGCGAGGATTATCGTGAGAAACAGAAGATTCTCGGAATAGGCAACTGGATAGAGCCACCAAAACGCGAGCGTAAAGCTAATTATGCCGTCGACGCTTATTTCAGAGAAGCATTGAGAGTATCGGAACCGAAGGCGCCGAAAGCGCCGAGGCCGCCGAAGCAACCAATAGTGCAAGATTTTCAGTTTTTTCCACCGCGACTGTTCGAGCTGCTAGATCaggagatttattattttaggcAGACAGTCGGCTACAAAGTCCCGAAAAATCCCGAGCTCGGATCGGACGCCGCCCGAATACAGAAGGAGGAACAACGCAAGATCGACGATGCTCAACCGCTCACCGATGAGGAAATCGTCGAGAAGGAGAAGCTGCTTCTTCAAGGCTTCACTAACTGGACCAAACGGGACTTTAATCAGTTCATCAAGGCAAACGAGAAATATGGCCGCGACGATATCGAGAATATCGCCAAGGAGGTCGAGGGGAAAACGCCGGAAGAAGTAATGGAATATTCGGCCGTTTTCTGGGAACGTTGCCACGAGCTCCAGGATATAGACCGCGTGATGGCCCAGATCGAGCGAGGCGAGGCCAAGATACAAAGACGCGCGGGTATCAAGAAAGCTCTGGATGCTAAGATGGCCAGATATCGCGCGCCCTTTCATCAGCTCAGGATAGCTTATGGCACGAACAAGGGTAAGAATTACACCGAGGAGGAGGACCGATTTCTCGTTTGTATGCTGCACAAACTTGGTTTCGACAAGGAGAACGTGTACGAAGAACTACGAGCTACGGTGAGATCGGCGCCACAATTCCGTTTCGATTGGTTTGTCAAATCCCGCACCGCGTTGGAGTTACAGCGTCGCTGCAATACCCTGATAACACTGATAGAACGCGAGAATCAAGAATTAGAGGAACGCGAGAGacaagagaggagaaagaaaggtGGCAGCTTAGGAACGAAACCGACCTCGAAGCGAAAGCAAGAGAATCTGCCGGCGCCTCAAGATAAAccgcgaaaaaagaaaaagtaa
Protein Sequence
MSKPDENADTGDTGDNSNGSSAETTSSRGGDFETKLETDRSKRFDYLLKQTEIFSHFMTNNQKDKAGSPLKIKAGRPRKQQPENQPKSDSGDHRHRKTEQEEDEELLAESNASVAPTTRFESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIVPKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKSEVEKGLKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYNAPGSEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNKDEMLNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLESLGESSLRNFTVDAPTDSVYQFEGEDYREKQKILGIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAARIQKEEQRKIDDAQPLTDEEIVEKEKLLLQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITLIERENQELEERERQERRKKGGSLGTKPTSKRKQENLPAPQDKPRKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00305004;
90% Identity
iTF_01508804;
80% Identity
iTF_00280556;