Clem021284.1
Basic Information
- Insect
- Cataclysta lemnata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963931975.1
- Location
- OZ008360.1:10301514-10303988[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.047 6.3e+02 1.1 0.4 4 10 169 175 168 177 0.94 3 20 1.1e-07 0.0015 19.1 15.7 3 19 186 202 185 202 0.95 4 20 4.7e-08 0.00062 20.3 12.8 1 19 237 255 237 255 0.93 5 20 1.3 1.7e+04 -3.5 1.0 6 10 280 284 279 284 0.88 6 20 1.6e-09 2.1e-05 25.0 10.2 1 19 290 308 290 308 0.99 7 20 8.9e-07 0.012 16.2 17.1 4 19 346 361 344 361 0.93 8 20 6e-06 0.079 13.5 18.3 1 18 395 412 395 413 0.97 9 20 9.1e-09 0.00012 22.6 15.9 1 19 422 440 422 440 0.99 10 20 0.92 1.2e+04 -3.0 1.4 5 10 468 473 468 473 0.93 11 20 8.2e-05 1.1 9.9 9.5 9 19 488 498 486 498 0.89 12 20 0.066 8.8e+02 0.6 5.9 4 12 510 518 508 518 0.89 13 20 0.31 4.1e+03 -1.5 3.5 14 18 547 551 547 552 0.87 14 20 1.4 1.9e+04 -3.6 0.2 8 11 568 571 567 571 0.82 15 20 1.1e-05 0.15 12.7 4.6 1 11 588 598 588 599 0.97 16 20 0.69 9.2e+03 -2.6 1.4 15 18 613 616 612 617 0.83 17 20 0.0098 1.3e+02 3.3 14.5 4 18 630 645 628 646 0.84 18 20 2 2.6e+04 -6.5 3.4 9 13 652 656 652 656 0.71 19 20 2.6e-06 0.034 14.7 11.5 1 16 687 701 687 707 0.92 20 20 1.1 1.4e+04 -3.2 0.7 5 10 736 741 736 741 0.91
Sequence Information
- Coding Sequence
- ATGCCCAGAAGTTACCGGGAAGCCGCTGCTAAATTGCACCAGAATGTGCAGAAACATTTGAAAGGACTGGAGGAACTGTCGTCTTCTGAAGACGACGAGCCCTACGAGTCCAATGTGTTGGATGGCATATTCCAGTCCTATGGAGGCGCCGGCGGTGATGTCAAATTACTGGACCGCACTAGACATCTCTTAGAAGAAGCCATCAGTGCGGGGTCTGTTATCTGTCTTATTTGCATAAGCTCCGTCAAAAGAGTCGAAGCTATATGGTCTTGCGACCATTGCTACTGTTACTTTCACTTATCCTGCATCCAGAAGTGGGCAACTGACAGTGTCAGTGTCAGAAATGACGAAACCCAAGGCCCTATTGCCGTGTTTGTGCCCAGAAAAATTGAATGGTGTTGCCCAAAGTGCAGGCACTCGTACACCAAAGAACAAATACCACAAAAATACCGCTGTTTCTGTGGCAAAACCAATGATCCACCACACCAGCCCTGGTTGATACCCCACACTTGTGGTGACACTTGCGGTAAACGTCTTTCTGTGACAGACAACTGTAAACACAAGTGTATATTGCTATGCCACCCTGGTCCATGCCCGCCATGCCCTCAAACCGTACTGGGAACTTGCTATTGCGAAAAAGAACAAAAGAGAGTGCGCTGCAGTGCAGCAAAGTGGTCCTGCAATCAACAATGCAAGAGAAACCTATTATGCAATTCACACAAGTGTGAAAATGTTTGCCATGAAGGGGAGTGCTCTCCTTGTACTTACACTAGTGTCCAACGTTGTCAATGCGGTAGTAAAACAACAAAACTGCCCTGCAACAACCCCACTTGGCAATGTGATAAAGTTTGTAACAAGCCCTTCTCATGTGGATATCACAAGTGTGACTGGGTGTGTCACTCGGGTGACTGTGGCTCTTGCCCAAACTCTGGCACGAGATCTTGTCCCTGTGGTGCAAATCAGAGGTTTGTGACATGCCCTGATGTTATGGAGACATGTATGGGCACATGTAGTAAGAAGCATGAAAATTGTTTACACAGTTGCCCAGAAAAATGTCATAAGGGACCATGTCCTCCGTGTCAGgttcttattgaaaaaaaatgtctttgCTCAGCACACACCAGGATGCTACCATGTAGTAAGGAATATAAGTGTGACACAAAGTGTAGGGGTGTGAGGCCATGTGGTAAGCATGGTTGTGCTCGAAAATGTTGTAATGGAAACTGCCCACCCTGTGAAAAGTTATGTGACAAGCCCCTACAGTGTGGACGTCATAAGTGCACAATGGTTTGCCATCATGGCCCATGCTATCCATGTCCAAGGGAATCTAAAATAACATGCAGATGCAAAGAAACATTTGTCACAGTGCCTTGTGGAagagaaaagaatacaaaaCCCCCAAAATGTAAAAagatttgtaaaattaaatacaaatgtgGGCATGTTGATGAGAACAAACATTCGTGTCACCCTGGTGACTGTCCGCCATGTAAAGCTATCTGTCTGAAACCATATCCTAAGTGTGTGCATCAATGTGTTGCAGTTTGTCATGAATTTGTAGCTGTAATTTTTAAGCAGGTAGAAAAGCCAGCAACTCCATGGGAAATTACGCCtcctaaaactaaaataatggCTCTAGATTGTCCACCCTGTGAGGCACCAGTCCCTGTAACTTGTTTTGGGGAACATGAAACTGAGGATCAAAAATGTCATATGGCAAAGCGCAATTGTTGTGGACGTACATGTTCCCAACCCCTGACCTGTGGTAATCATAACTGCTCATTATTGTGTCATTTGTATGCGGCAAATCCAGAATATCCAAATGTGCCTTATAAATGCAAGCCATGTGACAGAGAATGCATTGTTCCCCGTCCAGAAAAATGCACCCACAAGTGTGCCATCCGAAATTGCCACCATGGACCATGCCCTGCTTGTGAAATACTAGAAAGAATACCTTGCCACTGTGGCATTAcagaaatatatttgaaatgtCGAGAGCTCGGCAGTGCTAATGAAGAAATACTCTCATGTAAGATGCAATGTCCCAAGAATTTGAAATGTGGCCACCGCTGTAAGAACACTTGCCATTCAGGCCGCTGTGATGAAGGTCAAATCTGTAACAAGAAGACTAAAATATACTGCCCATGTGGCAACTTAAAGAAGGAATTTCCATGCAGTCTTGTGAAGACCGGAGAAGTCTCCGTTACATGTGATGATACCTGTGAAGCAAAAAAAACAGCTGCACAGCTGGAACAGGAGAAAGAGAAACGTAGATTGAAGGAGTTGGAAGAAGAGAAGAACCGTAAGGAGTTAGCAGAATACGAGTGGAAATTGAGTGGCAAGAAAAAGAAATACAAGGAGAAGAAGGTAGTTCAAAATATTGATGAGCGAAATGTTCTTCAAAAATACTGGATTcctattttatcaataattattgtcttggggGCAGGTTTTTACATGGTTTTTCAAATGTAG
- Protein Sequence
- MPRSYREAAAKLHQNVQKHLKGLEELSSSEDDEPYESNVLDGIFQSYGGAGGDVKLLDRTRHLLEEAISAGSVICLICISSVKRVEAIWSCDHCYCYFHLSCIQKWATDSVSVRNDETQGPIAVFVPRKIEWCCPKCRHSYTKEQIPQKYRCFCGKTNDPPHQPWLIPHTCGDTCGKRLSVTDNCKHKCILLCHPGPCPPCPQTVLGTCYCEKEQKRVRCSAAKWSCNQQCKRNLLCNSHKCENVCHEGECSPCTYTSVQRCQCGSKTTKLPCNNPTWQCDKVCNKPFSCGYHKCDWVCHSGDCGSCPNSGTRSCPCGANQRFVTCPDVMETCMGTCSKKHENCLHSCPEKCHKGPCPPCQVLIEKKCLCSAHTRMLPCSKEYKCDTKCRGVRPCGKHGCARKCCNGNCPPCEKLCDKPLQCGRHKCTMVCHHGPCYPCPRESKITCRCKETFVTVPCGREKNTKPPKCKKICKIKYKCGHVDENKHSCHPGDCPPCKAICLKPYPKCVHQCVAVCHEFVAVIFKQVEKPATPWEITPPKTKIMALDCPPCEAPVPVTCFGEHETEDQKCHMAKRNCCGRTCSQPLTCGNHNCSLLCHLYAANPEYPNVPYKCKPCDRECIVPRPEKCTHKCAIRNCHHGPCPACEILERIPCHCGITEIYLKCRELGSANEEILSCKMQCPKNLKCGHRCKNTCHSGRCDEGQICNKKTKIYCPCGNLKKEFPCSLVKTGEVSVTCDDTCEAKKTAAQLEQEKEKRRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKVVQNIDERNVLQKYWIPILSIIIVLGAGFYMVFQM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -