Clem021285.1
Basic Information
- Insect
- Cataclysta lemnata
- Gene Symbol
- nfxl1
- Assembly
- GCA_963931975.1
- Location
- OZ008360.1:10305276-10306796[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.55 7.3e+03 -2.3 1.4 14 19 124 129 124 129 0.84 2 10 0.011 1.4e+02 3.2 0.6 4 10 160 166 159 167 0.97 3 10 1e-06 0.013 16.0 18.1 3 19 177 193 176 193 0.95 4 10 4.7e-08 0.00062 20.3 13.7 3 19 231 247 219 247 0.92 5 10 0.4 5.3e+03 -1.9 1.9 6 10 271 275 270 275 0.90 6 10 9.7e-09 0.00013 22.5 14.8 1 19 281 299 281 299 0.99 7 10 1.4e-06 0.018 15.6 17.4 3 19 336 352 328 352 0.86 8 10 0.084 1.1e+03 0.3 9.3 1 19 386 404 386 404 0.86 9 10 8.1e-06 0.11 13.1 17.6 1 19 413 430 413 430 0.99 10 10 3.2e-05 0.42 11.2 8.1 10 19 479 488 477 488 0.91
Sequence Information
- Coding Sequence
- ATGAGTATATCAGAGAAGCACTTAAAACCGACAGACACTCAGGATGAACTATCGTCTTCTGACGACGAGACACCATATGAAGAGCACGACTTTAATGGCATATTTGAACCATACGAAAAGGTAGGCGGGGACTTTAGCTTACTACATCCCACTAGGAATATTCTGGAAAAAACAGTGAGTGCCCAATCTGTATTCTGCATCATTTGTATCAGATCCATTAAGCGCGCTGACGCCATTTGGTCTTGTAGCCATTGTTTTTGTCTCTTTCACCTCGTATGCATACAGAAATGGGCGAGGGACAGCGTCCACCACAGAACTGATGAGATTCAAGGGCCCATTTCAGTCTTTGAACCTAGGAAAGTTGAATGGAATTGCCCAAAATGCAAACACCCTTACATAAAAGAGCAAATACCTGACAAGTATCTGTGTTTTTGCACTAACACAGTTGATCCTCCATTTGATCCAAAGGGGATACCTCACACTTGCAGGCAGATTTGTGGCAAAAGACTGTCCCTGCTAGACAATTGTAAACACACATGTGTTTTGCCTTGTCATCCGGGGCCATGCCCACCATGCCCTGAAGCCGTCAACACATCTTGTTTTTGCAAAAAAGGCAGAAAAAAGCGAGTTCATTGTATTTCACCGACATGGTCCTGTGGGCAACAATGCGAAAGGCCCCTTATGTGTCATGCACATTATTGTGAAAACGTGTGCCATGAAGGAAATTGTCCACCGTGCACAGTGAAAGAACAACCTTGCCAATGTGGTGCTTTGAAAACCAAACGCCCGTGTAATGATCTGCAGTGGCAGTGTGAGAAGGTGTGTGATAAAACCTTGTCCTGTGGTTATCACAATTGCAAGAGAGTGTGTCACGCAGGTGGCTGTGGCCCTTGTCCAAATGCTGGCATGCAATCCTGTCCGTGTGGGTCAAATCAAAGATTTGTGCAATGTCCTGATGCAATGGAGACATGTTTAGGAACATGTGGCAGGAGACATGAAGATTGTGAACACAACTGCACTGAAACATGCCATAAAGGGCCTTGCCCTGTCTGTCAGGTTTTGGTGGAGAAAAAGTGCCAATGCTCTGCACAACTGAGTATTTTACCGTGCAGTGATTTTTATAAGTGTAATGTCGACTGTGGTCACAAGAATTCATGCGGTAAGCACATTTGCAAACTGGAACACGGTTACGGAAGCTGTCCACCTTGTAAGGAAATATGTGGTCAACCTCTACGGTGTGGTCATAGTTGCACTATGACATGTCATTATGGCCCATGCCACCCTTGCCCAATTGAATCTAATGTTGCATGCAGATGCAGAGAAAATGTTATCTTAGTTCCTTGTGGTAGAGCAGAGAATTCAAAGCCCCCTAAATGTGCAGTGTTATGTAAAACCAATTACAAATGTGGGCATGGCAAGGAAAACCGGCATGCATGCCACTCTGGTGATTGTCCACCTTGCACAGCCATCAGTTGTAAACAAAACATCAATCAATATGATATGGATATGATATGTGATTAA
- Protein Sequence
- MSISEKHLKPTDTQDELSSSDDETPYEEHDFNGIFEPYEKVGGDFSLLHPTRNILEKTVSAQSVFCIICIRSIKRADAIWSCSHCFCLFHLVCIQKWARDSVHHRTDEIQGPISVFEPRKVEWNCPKCKHPYIKEQIPDKYLCFCTNTVDPPFDPKGIPHTCRQICGKRLSLLDNCKHTCVLPCHPGPCPPCPEAVNTSCFCKKGRKKRVHCISPTWSCGQQCERPLMCHAHYCENVCHEGNCPPCTVKEQPCQCGALKTKRPCNDLQWQCEKVCDKTLSCGYHNCKRVCHAGGCGPCPNAGMQSCPCGSNQRFVQCPDAMETCLGTCGRRHEDCEHNCTETCHKGPCPVCQVLVEKKCQCSAQLSILPCSDFYKCNVDCGHKNSCGKHICKLEHGYGSCPPCKEICGQPLRCGHSCTMTCHYGPCHPCPIESNVACRCRENVILVPCGRAENSKPPKCAVLCKTNYKCGHGKENRHACHSGDCPPCTAISCKQNINQYDMDMICD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -