Clem006389.1
Basic Information
- Insect
- Cataclysta lemnata
- Gene Symbol
- GATA-B
- Assembly
- GCA_963931975.1
- Location
- OZ008342.1:18140897-18147541[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-17 4.1e-13 49.2 6.9 1 35 52 85 52 86 0.97 2 2 2.3e-18 1e-14 54.4 6.1 1 35 105 138 105 139 0.97
Sequence Information
- Coding Sequence
- ATGAAGCCTGGCCTGTATGACTCGATGTATGAGCTCACGGTTCGCTGTTTCCAGGAGGCGTGGGCCCTGGAGGCGAACAGGCGCCCGCAGCTGTCGGCCGCCGCCAGCCTCTCAGCCATGGAGGTGGCGGAGTTGTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCACGGTGCAGACGCCGCTGTGGCGCCGGGACTGCACGGGCCACTACCTGTGCAACGCCTGCGGGCTCTACACCAAGATGAACGGCGTCAACCGGCCGCTCAAGCAGCCGCGGCGGCCGGCCAGCGGCAAGCGGCCCGGCACCGTGTGCACCAACTGCAGCACGCAGACCACCTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACGTCAATCGTCCGCTCGCCATGAAGAAGGATAACATCCAGACGCGGAAACGGAAACCGAAGAACGGCATCAAGTCTGAAAGAAACCTGAAGACCGCGCTACAGCGCACACTGGCCGGCGTCAAGATGGAGAACCTAATGGAAAGCGGCCCGCGCACCGGCATGAGCAGCGGCGTGGGCGTGGGCGTGGGCGTGGGCGTGGGCATGAGCGTGAGCCCCGGCGTGGGCGTGGGCTACTACGCGGCGCACATGAAGCTGGAGTCGCCGCCGCCCGCGCACGCCGCCTTCGAGGAGGAGTTCCGCCGAGCCCCCGACCGGGAGAGGGAGAGGGAGCGGGAGAGGCCCACCGTCGTCTCGCTCGGCAGCTGA
- Protein Sequence
- MKPGLYDSMYELTVRCFQEAWALEANRRPQLSAAASLSAMEVAELFTEGRECVNCGTVQTPLWRRDCTGHYLCNACGLYTKMNGVNRPLKQPRRPASGKRPGTVCTNCSTQTTSLWRRNAHGETVCNACGLYFKLHNVNRPLAMKKDNIQTRKRKPKNGIKSERNLKTALQRTLAGVKMENLMESGPRTGMSSGVGVGVGVGVGMSVSPGVGVGYYAAHMKLESPPPAHAAFEEEFRRAPDRERERERERPTVVSLGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -