Basic Information

Insect: Cataclysta lemnata
Gene Symbol: -
Assembly: GCA_963931975.1
Location: OZ008359.1:6862224-6878420[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.19 15 6.9 2.5 1 23 311 334 311 334 0.96

2 14 1.1 85 4.5 0.6 1 20 397 416 397 420 0.80

3 14 0.017 1.3 10.1 1.9 2 23 695 717 694 717 0.96

4 14 1.7 1.3e+02 3.9 0.0 2 21 723 742 723 743 0.94

5 14 0.0017 0.13 13.3 0.1 3 23 831 851 830 851 0.95

6 14 0.0038 0.29 12.2 0.1 1 23 866 888 866 888 0.98

7 14 5.3e-06 0.00041 21.2 1.9 1 23 894 916 894 916 0.98

8 14 0.04 3.1 9.0 1.4 2 20 922 940 921 942 0.92

9 14 1.3 98 4.3 0.0 5 23 942 960 941 960 0.92

10 14 5.3e-06 0.00041 21.2 1.9 1 23 966 988 966 988 0.98

11 14 0.017 1.3 10.1 2.5 2 23 994 1015 993 1015 0.95

12 14 0.16 12 7.1 0.9 3 22 1023 1042 1022 1042 0.91

13 14 2.4 1.9e+02 3.4 0.4 1 20 1051 1070 1051 1070 0.88

14 14 0.00049 0.037 15.0 0.1 3 23 1083 1104 1082 1104 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.19	15	6.9	2.5	1	23	311	334	311	334	0.96
2	14	1.1	85	4.5	0.6	1	20	397	416	397	420	0.80
3	14	0.017	1.3	10.1	1.9	2	23	695	717	694	717	0.96
4	14	1.7	1.3e+02	3.9	0.0	2	21	723	742	723	743	0.94
5	14	0.0017	0.13	13.3	0.1	3	23	831	851	830	851	0.95
6	14	0.0038	0.29	12.2	0.1	1	23	866	888	866	888	0.98
7	14	5.3e-06	0.00041	21.2	1.9	1	23	894	916	894	916	0.98
8	14	0.04	3.1	9.0	1.4	2	20	922	940	921	942	0.92
9	14	1.3	98	4.3	0.0	5	23	942	960	941	960	0.92
10	14	5.3e-06	0.00041	21.2	1.9	1	23	966	988	966	988	0.98
11	14	0.017	1.3	10.1	2.5	2	23	994	1015	993	1015	0.95
12	14	0.16	12	7.1	0.9	3	22	1023	1042	1022	1042	0.91
13	14	2.4	1.9e+02	3.4	0.4	1	20	1051	1070	1051	1070	0.88
14	14	0.00049	0.037	15.0	0.1	3	23	1083	1104	1082	1104	0.96

Sequence Information

Coding Sequence: ATGTCTcgaattaacaaaaaatcaaCAAGGAAGTCCAAATTAGTGCCTCGTCTCTACGATTACGAAAATGATTATCCACAAATGCAGGATGAAAATAAGATGCAATTTGATGCAGTACCAATACCACGGCCCCCACCTGCTGATAAATTGTCATTTGATGTGAAAGTGGAAGTTGAAGAGTTTGATGAAAAGCTATTGAGCATCCCTGATGATTCATGCCATGAAGCGTTGCAGCCGGTTAAAATTGAAGTTGACAGTGAGGCCGAGCGTGACTGTGATAATAATACCcaaaatatatcaaataagTATCTTCACAAGACAAAAAATACTCCTGTGCATGGCCTCATTCGACAGTGCAAAATTGATGCAAAGGTTATCTTGCGAGATTTGGAAAAGCTAGCCAATATGACCACTAATGTTGGTGATAAAATACTAGAAAATGAGATGAGAAACACATGGGGGAGGACTCTTTATGAGGTACATAAAGAAGACTATATTACTTTTTCTATTACTAAGTGCATTGAGAAATGGAAAGTTTGGAGTTATGGCTCGATTCAACGAGACACCCCAGTTATGTACAAGTGCTATGTTTGTAATTTAGGTTGGTGGCATCTTTGGCCTTTTCGTGAACATGCACACACCATCCATCATCCAGGCAAGATGTTGAACATAAGTTTGGAAATTATACAACACGAAAGTTTCATTGTAGCGCATCTGGAGAATCTGCCAGGGAAACCCAAAGAAGTTGCTATTGACGGTTTCTGTTATAAATGCGGCCGTGGTGCAGACTTTCACAGAATAAATCAGTATACCTGTAATTACTGTATGAACCGCTTTTATAGCACATGCAATACCTTAAGGGAGCATGAAGTCACATGCTCTCGATATAAGATAAAATTAAGAGAGGAAAATCCTGACAACTTGGAGTTTTTTAAGTGCCACCTATGCAAAATAGTTGAGAGTACATATAGCGCACTTGAGCAACATTACCAATACTTCCATATGGTTAGATCGGACATTCCAGAGGAGCTTGTAGTAAAGGTGTGTTCTTCATGCAGCCAACTGTACTCTACAATTAGTTTGCATTCCTGTCCACTGAAACCAGGGTATATTGTTTGCGTAGCTTGCAGAAAGCGGTATGCATCTACACTTCTATGTGATATCCATAAACAGAACAGTGCCGTTAACTACAAATGCAAATTGTGTGATGAAGTGCTTCCTAACCAGTGCATGGAAATACGGCACATTGTAGAAAAGCATTCCACAAATTATATGATGGTTGCTAAGTGtatgatttgtattgaaaacgTGTTATTTCTAGATGAATCCTCGCTTAAACTGCATATGATTCATGTACACAGAAACAAGAAAtatgaaagaagaagaaggtttttGGAGGTTATTGTGCCCAAAATGATTGCGGAATCGAATCTAGTGGAAGCAATATCTGTGAATATTTCCGGAAAGATGATGAACCTGTACAATGAGTCAAATTCCTCCAATGGATCGGCCGAACCAGAGAGCGATGCTTCAAACATAATAATCACTGAAATATACGGCAGCTGCGCTGAAAACCGACAATTGGAAAAGAAAGAGAGTAACGCAAAAGGTGACACCGCCACGCATTTACCTGCCACCGTCAAAACCGAACCTGTCGACGAGGAAATCGAAGACAATGAGGACTATGAAGAAGACATCACCATAAAAGAAGAGATGGTCGAAGAGCAATCGGCCGAGAATGGGACCGACAAGTTTAACTACGAAGACATACTGTCTAGAATGTTCGGCGTTGCCAAACAGGGCGGAGCAGAAGTGAAAGTTAAGCAAGAGCTCGGAGAAGATGTGTTCGCCGAAGTAATCAAAACGGACGAAGAAGACGACTTTGTTGAGGACCTGATCAGCTTGAACAAACCACCTGAGGCTGTAGAAAGTGACGCCGAGTCTGATGTCTCGTCCAAATACGCCTCCGACGACGTGGACTTTGAAGTAGTAAAGAAGCCCAAGAAGAATTGTGACAAATGCAAGTTTTCCGGCACCCCCTGCGAGTTCTCGAAGCATCTGGAGTTCTGCTGCAAGCCGCTGCGGTGCACCAAGTGCGACAAGGACTATTTCACGATGAAGTCCTACGTGAGACATTACAGCACGGTCCACGGTCACAAGGAAAATACTTGCCCTGTATGTGCCGCCACCCTTTCCGGCACGAGTTACCTCATCAACCATGTAAGGGGCGAAGTTTCAAGGTCGTTTAATAAGTTACGCAGCTATAATAAGACTAACAGAGGCGCCGGCGTTCAAGTCGCGAACCACTGCAAGAAGTGCAAGGTGGAGGTACCTGTGGGGAGCATGTTCGTCCACTGGGAGACGCACCTGGTGCTCGGCAAAGGGGTTGAACAGGATAACGCTGGTGATAAGCAGGCTATGGTCCACGCCCAGGCGCTTGcggTGCAACTGCTGCAAAAGCCGGACGACTACTGGACCTCGAACAGGGACTGCGTGGTGTGCGCCAAGCCGTTCAACAGGAAGGCCGACTTCCAGAGGCACCTGATCGAGCACCTGTACAATGACTCCGCCAACAGATTCGGCCAGCACCATGGGTACAGCTGCCAGATATGCGGCGAGGTCGCCGACAAGGGGTACCTGTACAGGCAGCACATGAGGATCCACGCGTGCCTGCCCCTGTACAGCTGCTCGATGTGCAACAAGGACTTTAGCGATTCCAGTAACTTTGCGAAGCACAAGAAGATACACAACTTCAATGTGCTCACCTGCAAGATCTGCAAGAAGAAGTTTCACATCGTGAAACAGCTGGAGAAACACCTCGAGATATGCGGCGAGGTCGCCGACAAGGGGTACCTGTACAGGCAGCACATGAGGATCCACGCGTGCCTGCCCCTGTACAGCTGCTCGATGTGCAACAAGGACTTTAGCGATTCCAGTAACTTTGCGAAGCACAAGAAGATACACAACTTCAATGTGCTCACCTGCAAGATCTGCAAGAAGAAGTTTCACATCGTGAAACAGCTGGAGAAACACCTCGAGCTACACCAACAGACGACCCCGAACACGTGCTCGTGCTGCGAGAAGGTGTTCTACGACCTGCCCGCTTACAAGCGTCACCTGCGCTCGATGAGCAGCAGGCAGTTCCCAATGTACCCGTGCCAGGTGTGCAGGATGAAGTTCCCATCGTTCCGGAGCAAGCTGGATCACATGTGGGAGGTGCACGGGGTCAGGAACCAGAATGTCGACTGCCCGGTGTGCGGGAAGCCGTTCAGGAAACTATTAGATGTGACCAAGCATTTGCGCGAAGTGCATGGGTGCAGGCCGGGGGAGCACATGAAGATATTGAAGAGCAGGATCAAGAATAAtgccaagaaaaagaagaaatag
Protein Sequence: MSRINKKSTRKSKLVPRLYDYENDYPQMQDENKMQFDAVPIPRPPPADKLSFDVKVEVEEFDEKLLSIPDDSCHEALQPVKIEVDSEAERDCDNNTQNISNKYLHKTKNTPVHGLIRQCKIDAKVILRDLEKLANMTTNVGDKILENEMRNTWGRTLYEVHKEDYITFSITKCIEKWKVWSYGSIQRDTPVMYKCYVCNLGWWHLWPFREHAHTIHHPGKMLNISLEIIQHESFIVAHLENLPGKPKEVAIDGFCYKCGRGADFHRINQYTCNYCMNRFYSTCNTLREHEVTCSRYKIKLREENPDNLEFFKCHLCKIVESTYSALEQHYQYFHMVRSDIPEELVVKVCSSCSQLYSTISLHSCPLKPGYIVCVACRKRYASTLLCDIHKQNSAVNYKCKLCDEVLPNQCMEIRHIVEKHSTNYMMVAKCMICIENVLFLDESSLKLHMIHVHRNKKYERRRRFLEVIVPKMIAESNLVEAISVNISGKMMNLYNESNSSNGSAEPESDASNIIITEIYGSCAENRQLEKKESNAKGDTATHLPATVKTEPVDEEIEDNEDYEEDITIKEEMVEEQSAENGTDKFNYEDILSRMFGVAKQGGAEVKVKQELGEDVFAEVIKTDEEDDFVEDLISLNKPPEAVESDAESDVSSKYASDDVDFEVVKKPKKNCDKCKFSGTPCEFSKHLEFCCKPLRCTKCDKDYFTMKSYVRHYSTVHGHKENTCPVCAATLSGTSYLINHVRGEVSRSFNKLRSYNKTNRGAGVQVANHCKKCKVEVPVGSMFVHWETHLVLGKGVEQDNAGDKQAMVHAQALAVQLLQKPDDYWTSNRDCVVCAKPFNRKADFQRHLIEHLYNDSANRFGQHHGYSCQICGEVADKGYLYRQHMRIHACLPLYSCSMCNKDFSDSSNFAKHKKIHNFNVLTCKICKKKFHIVKQLEKHLEICGEVADKGYLYRQHMRIHACLPLYSCSMCNKDFSDSSNFAKHKKIHNFNVLTCKICKKKFHIVKQLEKHLELHQQTTPNTCSCCEKVFYDLPAYKRHLRSMSSRQFPMYPCQVCRMKFPSFRSKLDHMWEVHGVRNQNVDCPVCGKPFRKLLDVTKHLREVHGCRPGEHMKILKSRIKNNAKKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -