Clem001749.1
Basic Information
- Insect
- Cataclysta lemnata
- Gene Symbol
- zfy1
- Assembly
- GCA_963931975.1
- Location
- OZ008339.1:1369604-1381522[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2.9 2.2e+02 3.1 0.3 2 23 6 27 5 27 0.95 2 13 0.023 1.8 9.7 0.6 1 23 993 1016 993 1016 0.92 3 13 6.9e-06 0.00053 20.8 1.5 2 23 1123 1144 1122 1144 0.97 4 13 0.00012 0.0091 16.9 2.9 1 23 1150 1172 1150 1172 0.98 5 13 0.0044 0.34 12.0 2.5 2 23 1179 1200 1178 1201 0.95 6 13 0.056 4.3 8.5 0.8 6 23 1215 1232 1212 1232 0.98 7 13 0.042 3.2 8.9 1.3 3 23 1239 1260 1238 1260 0.96 8 13 0.0097 0.74 10.9 0.1 2 23 1276 1296 1275 1296 0.96 9 13 7.2e-05 0.0055 17.6 0.5 1 20 1302 1321 1302 1324 0.92 10 13 0.0012 0.096 13.7 0.1 1 23 1332 1354 1332 1354 0.98 11 13 0.0056 0.43 11.7 7.2 1 23 1360 1382 1360 1382 0.98 12 13 7.7e-06 0.00059 20.7 1.4 1 23 1388 1412 1388 1412 0.98 13 13 0.00065 0.05 14.6 5.5 1 23 1418 1440 1418 1441 0.96
Sequence Information
- Coding Sequence
- ATGGATCAGCTTGTACAATGCCCTGTGTGCACACTATACCTCCACAATGGTATGAGTCTGGAAACTCACTTAGATACACACCCCAAAGATCAGGTGATAAAAGCATTATGCaatcttgctaataataaaggTGGCAGTAGTTTTGGAAGTAGGACATCAACCCCGTTACTGTCTGAAAGGTCTTATAGAAGTAGATCCCGAACTCCTGCTAATGAAGAGAGGTGGCCAAGCTCCCACCGCAGTGACAATGATCGTTATTGGAGGAGGACACCCAGCAGAGCATCTAAATCAAGTCAAATGGCTAATTCTCGAATTGGAACACCTGATACTAGAATACCTGAAATTACATTTGACAACAACTTATCCAATTCTATTCCGTATTCTGGCACTCCATGTTCTATAAAATGTGATAAGCCAAATTATTCAAATACTCCAACATTATCAGAATTTGATCCACAATATGCTTACTACTCAGAGTCTCATGAGGATAGAGAGATTAAGTACTCCCGCAGTGATGAGTATACCCCATTGGACAGCAATTGCACTATCTTCTCTCATAATACACCCACAGTAAATCCGAATAGCAAACTCCAGACAAATTTAGTACCACCAGTATCCAGGAGAGGGTCtgaaaatattgtcaaaatgttACCAAAACCAAATAATATACTTGTGAAGAATGTAGGAGGGGTACAGTACATATCTCCAGGTGGGAAGTCAATGCATGTGATGGCAATGCCAACGACTCCCACATTTGtccaaaaaaatttacaaaataacatGATTGTGACTAACAGCATACCTGGCCCCCAAATTATAGAACCTAAAACTTTGAGCTCCTCTATAACTACCAACCAATTCAACCAAATGACTAGTAGCACCTTCACTCCCAGTACAACCGTTGTACAAAATTCACAAATTATTTATAGGGAAATGGTTCACAATATAGATGGGAAACGTTATATTTCATGTGTGCCTTCAGTACTAAGCCATGAAAATGTGACAAATGTATCTCAGGGAACCTCAATGTACCAGAATGTTATGGTGGTTGATCAGCTGGGTAATGCATCATGTATGTATACTGCTCCTCAGCCTATTATACCTAAACCATGTACATCCTCAATATACAATGAAACTATGACACATGTATCAAATAGTACAGTTCCAAATCTGGATAAACCTAGCCATGACTCCAATAAATCTCTTATCATAGAAGTAAGTCCAATGGCTACACCTGTTACTCTAGAAACGACATCTAGTTCTAATACTACCCAAACCAATGTAAATGTTAATATATCTAATAATCCAAGTACATTGCCTGTGCAAAGATTGGACAAGATTGAAATTCCTGGCTCTAACAAAGgtcttaaaatattaagtaatattaaagTGGAGGTACCTGTACAGCATCATAAAAATATGTTGAATACTGTAATGGATTTAACAGGTCCAAATGACTCTGAGTATATAACACGTCCAATAACACCGGAAGAAATACTGCCAGACCTGAATAATAGTGACAATATGGAGAAAAAACAGAATGAAGACTGTCCCCAACCTTCAGTGTCAAGTAGTGACAGTTTAGTCCCTCATACATTTTCTGTCATCAAAAATGTAGGTAATCCACCATCATACAAAGATTCAAAGTCAAGCATAGCAGAGAACAAGATGGATACTGAGTTTGCTGATAGCTGTCCGGTTCCTGATTTAATTTGTAATGAAAAACCCTCAATATCACCATGCAGCGAGCTGTCTGAAAATGGTGAAAGTTCAATAGATCGTAGTTCAATATCACCAAAACCACATAGTAGCCTCCAAGTGAACACTGAAAACCTATCTAAGAAAACAGATGAGCAAAAACCGTTCAAGAATAATTCATTgcggttaaataatatatttgtgaaAAAACATAAGAaagttttacaaataaaaaattcaaagacAGCAGCCAGTACAGATTCTATTCAAATTGAAGTAGAACCTAAACCCTCATCATCTTCTTGTAAATCCCCTGAAAAATATTCTATGAATAAAATCCACAATGTTGAAAAGAAAGATAAACAAAAAACACACACTTTGAAGACTATATCTGTTGAACAGATTAATGAAATTAATCAAACTCATACAGAATTTGATGCTGATACTGAGGAGCAATCTATGGATATAGAACCTGCAGTTCTGACAACTATGAATGATTctgaatttaaaattggaattaCTGTGGTACAAGTTAAAGAAGAAGCAAACACCAGTAATGAAGGGGCATTTAGCAACGACAACAGTTTGTCTAACCGGGACATGGCATCTATTGAAACTTTACATCCTATCAATGTAATAACATATGGAAACATGACAGACGGAGAATTCGAGGATGAATCTAACCATAGGGAACTATTGGAGCTTGAAGCAGTGTCTAAAAATAAACAGTTTGTCAGtatgatgaatgaaaattattttggaAATTATGGTGATTATCATACACCAGACAGAGTTGAGGCATTTGACACAGTGCGAGATTTTGCTTTTCCTAAAGAAGGTCCAAAAGAGGGAATGTACTTTTGGGGAGAGTCTTCACATAAAGAGAATGAGTTTGTTCTGCCAAATTATATTCACGACAGTTGTAAGATTGCTGATAGTAATGGACTTGATTATTCAGATATAGCCAACAGAGAGAACAGAGTAGACGGGGAAGCCGACAGGGACAGTAAAGTGGATGTATTGAGTGAGAGCCGCAGTGAGGGTGAGCCTCCTCTGAATATTTGCGCAGATGAACACATGCCTCCTCGAGGGGAGCTCAGCGGTCAGGAAAGCAACGGAGATATGGAATCACCATGGACTGGGATGTACCCTGACATACCACCGGCAGAGTCATATGATTTGATAGCAAGAGAAAGTTGGGTATCAGATAGTTCAGAAATGGATCCTAATGAGAAAAGGGATAATTTGGAAGAAGAGTTGTACCCAAAAGCGCGTGGTCATACATGTTCATTATGCAGTGGTAATTTCACATCTGCCAAGGAGTTACGTGCTCACAAGGCGCTTGTCCACCCACTGCTCCACACTCCCTCTACTACATACAGCCGCATGTTAACCACCAGGCATATCAAAAAGGAGGAGAAACCGGAGATAGGGGAGCCTGATAAAAAAGTCATACCAAGCAATATGTTACCATTAGACTCGAAGGAATCCATCGCGACGACGATGCTGCAAGTGTACGACGTGATGACGGACGCCAAGCCAAAGATTGAGTCTTTAATTAAACTGGAGCCAAAGCAGCGCCGCCGGAGAGACTACGTGTGCCCCACTTGCAAGGTTGACCAGTTGACGGAGGCGCTGTTCCACGCGCACTTGAAGATCCACCCTTTGGAGTGCCTCACGTGCGGCAAGTGCTTCTACCGGCGCGCGAACCTCGCGCTGCACATCAAGACGCACTTGGGGATCAAGAACTTTAAGTGCGAGGTGTGCGAGAAGCGGTTCATCACGAAGCAGAAGCTGAACGAGCACCACAACGTGCACACTGGTCGCGCGCCCGTCAAGTGCACCATCTGCGACGACACCTTCCGCAGATACTCCAACATGGTGCAGCACAGGGACCGGCACCACTTCCACAAGAAGCCGAAGGTGCGAGACTTCGTGTGCCCGTGCGGCGCGGTGTTCCACTCGCGCGCCAAGCTGCAGCGCCACCGCGAGACGCACGAGGAGCGGCCCCGGGCGTGCCTCTACTGCTCGGACAAGTTCGTGCACGAGGCGTCGCTCACGAGGCACGTGCGCCGCACGCACCGCGTGTACGCGCCAGCCGACAAGGGCGGCAGGCCGCAGAACGTGCCCTGTCCCGTCTGCAAGCAGATCTACCTGCGGTCGAACCTGCGCGCGCACCTGCTCACGCACAGCGGCAAGCGGCCGTACGTGTGCGTGGTGTGCAACAAGGCGTTCACCACCAAGTGGAACCTGAAGCTGCACCGCTGGACGCACATGTCCCGCTCCGCGAAACCTTTCAAATGCAACCTGTGTAAGGGCGCCTTTATAAGGCAACCGGAGTACATCGCCCATATGAACGCCCACAAATCGCTCAAGCCCTACACGTGCAACTACTGCGGATGCCAGTTTATTAGGAAGTACAATTGCCAACGCCACGTCCGCGAGCACGAGATGGCGAAGAAGTACGTGTGCAAAGTGCCCGAGTGCGGTAAGACTTTCCACAGGAGCTACTATCTTTCTGAGCACATGAAGGTGCATAGCGGCGCGAGGCCGTTCTCTTGCAATATATGCGGGAAGACCTCCAGCAACAAGTCGAATCACAATAAGCATCTGAAGATACACCACGCGCGCGAACCGGTCGCGACCGAAGCGTGA
- Protein Sequence
- MDQLVQCPVCTLYLHNGMSLETHLDTHPKDQVIKALCNLANNKGGSSFGSRTSTPLLSERSYRSRSRTPANEERWPSSHRSDNDRYWRRTPSRASKSSQMANSRIGTPDTRIPEITFDNNLSNSIPYSGTPCSIKCDKPNYSNTPTLSEFDPQYAYYSESHEDREIKYSRSDEYTPLDSNCTIFSHNTPTVNPNSKLQTNLVPPVSRRGSENIVKMLPKPNNILVKNVGGVQYISPGGKSMHVMAMPTTPTFVQKNLQNNMIVTNSIPGPQIIEPKTLSSSITTNQFNQMTSSTFTPSTTVVQNSQIIYREMVHNIDGKRYISCVPSVLSHENVTNVSQGTSMYQNVMVVDQLGNASCMYTAPQPIIPKPCTSSIYNETMTHVSNSTVPNLDKPSHDSNKSLIIEVSPMATPVTLETTSSSNTTQTNVNVNISNNPSTLPVQRLDKIEIPGSNKGLKILSNIKVEVPVQHHKNMLNTVMDLTGPNDSEYITRPITPEEILPDLNNSDNMEKKQNEDCPQPSVSSSDSLVPHTFSVIKNVGNPPSYKDSKSSIAENKMDTEFADSCPVPDLICNEKPSISPCSELSENGESSIDRSSISPKPHSSLQVNTENLSKKTDEQKPFKNNSLRLNNIFVKKHKKVLQIKNSKTAASTDSIQIEVEPKPSSSSCKSPEKYSMNKIHNVEKKDKQKTHTLKTISVEQINEINQTHTEFDADTEEQSMDIEPAVLTTMNDSEFKIGITVVQVKEEANTSNEGAFSNDNSLSNRDMASIETLHPINVITYGNMTDGEFEDESNHRELLELEAVSKNKQFVSMMNENYFGNYGDYHTPDRVEAFDTVRDFAFPKEGPKEGMYFWGESSHKENEFVLPNYIHDSCKIADSNGLDYSDIANRENRVDGEADRDSKVDVLSESRSEGEPPLNICADEHMPPRGELSGQESNGDMESPWTGMYPDIPPAESYDLIARESWVSDSSEMDPNEKRDNLEEELYPKARGHTCSLCSGNFTSAKELRAHKALVHPLLHTPSTTYSRMLTTRHIKKEEKPEIGEPDKKVIPSNMLPLDSKESIATTMLQVYDVMTDAKPKIESLIKLEPKQRRRRDYVCPTCKVDQLTEALFHAHLKIHPLECLTCGKCFYRRANLALHIKTHLGIKNFKCEVCEKRFITKQKLNEHHNVHTGRAPVKCTICDDTFRRYSNMVQHRDRHHFHKKPKVRDFVCPCGAVFHSRAKLQRHRETHEERPRACLYCSDKFVHEASLTRHVRRTHRVYAPADKGGRPQNVPCPVCKQIYLRSNLRAHLLTHSGKRPYVCVVCNKAFTTKWNLKLHRWTHMSRSAKPFKCNLCKGAFIRQPEYIAHMNAHKSLKPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKTFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHLKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -