Basic Information

Insect: Cataclysta lemnata
Gene Symbol: zfh1_2
Assembly: GCA_963931975.1
Location: OZ008365.1:349639-355128[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0025 0.19 12.8 2.0 2 21 178 197 177 198 0.93

2 18 3.4 2.6e+02 2.9 0.3 3 23 206 226 205 226 0.88

3 18 0.54 41 5.4 1.5 3 23 233 254 232 254 0.97

4 18 3.3e-05 0.0025 18.7 1.5 2 23 260 281 259 281 0.95

5 18 0.11 8.3 7.6 0.9 2 20 285 303 284 305 0.93

6 18 1 80 4.5 2.6 2 23 350 372 349 372 0.79

7 18 0.0096 0.73 10.9 0.2 3 23 380 399 379 399 0.97

8 18 0.0041 0.31 12.1 1.9 1 23 405 427 405 427 0.98

9 18 0.003 0.23 12.5 1.3 1 23 433 456 433 456 0.96

10 18 0.003 0.23 12.5 0.6 1 23 464 487 464 487 0.94

11 18 0.026 2 9.6 5.7 1 23 495 517 495 517 0.98

12 18 0.045 3.5 8.8 0.0 2 20 665 683 664 684 0.91

13 18 0.0046 0.35 11.9 1.1 1 20 715 734 715 736 0.95

14 18 0.00031 0.024 15.6 1.0 1 23 743 766 743 766 0.95

15 18 0.012 0.95 10.6 0.9 3 21 771 789 769 790 0.92

16 18 0.001 0.076 14.0 0.9 1 23 801 824 801 824 0.96

17 18 1.4e-05 0.0011 19.8 1.0 1 23 830 852 830 852 0.91

18 18 0.0012 0.092 13.8 1.2 1 23 859 881 859 881 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0025	0.19	12.8	2.0	2	21	178	197	177	198	0.93
2	18	3.4	2.6e+02	2.9	0.3	3	23	206	226	205	226	0.88
3	18	0.54	41	5.4	1.5	3	23	233	254	232	254	0.97
4	18	3.3e-05	0.0025	18.7	1.5	2	23	260	281	259	281	0.95
5	18	0.11	8.3	7.6	0.9	2	20	285	303	284	305	0.93
6	18	1	80	4.5	2.6	2	23	350	372	349	372	0.79
7	18	0.0096	0.73	10.9	0.2	3	23	380	399	379	399	0.97
8	18	0.0041	0.31	12.1	1.9	1	23	405	427	405	427	0.98
9	18	0.003	0.23	12.5	1.3	1	23	433	456	433	456	0.96
10	18	0.003	0.23	12.5	0.6	1	23	464	487	464	487	0.94
11	18	0.026	2	9.6	5.7	1	23	495	517	495	517	0.98
12	18	0.045	3.5	8.8	0.0	2	20	665	683	664	684	0.91
13	18	0.0046	0.35	11.9	1.1	1	20	715	734	715	736	0.95
14	18	0.00031	0.024	15.6	1.0	1	23	743	766	743	766	0.95
15	18	0.012	0.95	10.6	0.9	3	21	771	789	769	790	0.92
16	18	0.001	0.076	14.0	0.9	1	23	801	824	801	824	0.96
17	18	1.4e-05	0.0011	19.8	1.0	1	23	830	852	830	852	0.91
18	18	0.0012	0.092	13.8	1.2	1	23	859	881	859	881	0.98

Sequence Information

Coding Sequence: atgagtAGAGAAGTAGATATAAAGGCATTAATTTCGCACATAGTGCGTGGAGACGGTGCAGATAAATGTAGAATATGTATGGGTGATACGTCCGAAGGTCAAGTTTCTCTTGGAGACACAGTTATGATGGACGGAGACAGACCTGTTACGCTCGCGGAATTGTTGGAAGTTATAACGGGAGTGGAGGTCCAGATTGACGATGAGCTGCCGAATGGACTATGCTCCTTCTGCTCAGGTTCCGCTATTGACGCTGCCAATTTCACCGTACTCTGCCGTCAAGTTCATAATAAGTGGAAAACAACTCTCCTGCTTCTTGAGGCTGTCCCTTTGCCAAAGAACGTATCGTTGAATACAAAATCAATTTACGCTATTGTACAAGATGATAAATTAACTATTGTTGACGAAAAGAAATCTGAAAGTGCCAAGGAACCAATAAAACAAACTCCACTGACCCCAATACACAAACAACCAACTAGCTTACTGAAACATAAAATTAAGAACAAGAGAAGATCGGGTACGTTATGCCCCTGCCAGTGTCCAACCTGTGGAAAAAAATTCCAGTATGCCCACCTTCTATCATTACATTTAAAGGAGTCCTGCGATTTACTCCGTGCATGCCACATCTGTGCCCAAGTCATGTCCAGAGAGGATCTGATCAAGCATATGTATCTGGCTCACCAAACAAAGCCTTTACTCTGCAAAAAATGTCCAGCAATGTTTCACTTGCGAATGAAGTACATTAAACATGTTCAGACAGCCCACGCCAGTGGTGTCTGTACTTGTGGAGAATGCGGTCGTGTTTTTAAGTCCCGGTACGGTTTCAATGCTCATCAAACTGTGCACATACCGAAAACGTGTCCAGCCTGCGATGAATTGTTTAGAAATCAGTCCTGTTACCGTTACCACTTGACTGTGTGCTGCAATATTGGCAAGACCAAGCGAAGGTTGCACGTTACCAAGAACCGGGTGACAATTGAAGTTAAGAACCGGATCAGCATGAAGAAGGTCCGTGTGGGTCTACTTGGTGGCAATGCACAAAACGAATGTATTTGTGACTATTGCGGAAAGAAGTTTTTGGGCAGGAAATTCATAATGGCACATATTCAACATGTGCACATGAAGAATACTCACCGACCTTGTCCGTACTGCGGTAAATCCTTAGCGGCTGCACATATGACTGAACACATTAAAACTCATGAACTGGTGAGGGAATACAAGTGTGACCATTGTAATTTGGTGTTGAAAACTAGGTTGGGTTTCATACAACATCTGCGCTTACACACAGGAGAGAAACCGTACGCTTGCAACCAGTGCGGCCAGTCTTTCTCCGCTTCGTCAAGAAGATCAGAACACATGAAGAAGTTTCATAACACTGACGTGTTGTACAAACATCCATGTGATATGTGCACAGCTAAGTTCATTTTACCTTCGCAACTGAAAAAGCACAAGGCTTCCGTTCACAGTATATCAAGCGGCCATGCGTTCGAATGTGAAGTGTGTCATGAGAAATTTGGCAGCTGCAGAGGCTTAATTCACCACAGTCGGAAACACCAGAAGGACGTTGACCATACTCTGGTACCGAAACGGACTTCTGTTAACTTAATAACATTTCCTATTGAAGGCTTTCATCTCGGAACAGACTTGTACAGATGGAGTGACCAACGGGCGTTGTTCCAGATGGAGATCTCGCCCACGCTACCAGGACACGTGTGCTCTGCTTGCGTATCCACTGCCATGGTCACAGCGCGCTTCGTGCAAATGTGCCAAGCGGCAAACGAGCAATGGACAGGCATCTCCGAGTACCTCTCGAAACTGGGCGAGGCCATCTCCAATGGCGCGCAGAGCGCCTGCGTCTGCATAGAAGGCGGCGCGTACAAAACAATAGAGTCTGTGTCCCGAATGAGAACCACCGCGAAAGCCTTGAGGGTCGTCAGAAGATATCTCCCGAAGACCACAGATCAACAGCGCGGTAGCAGCACTGATAAGAACTTGCAATGCCCGGAGTGCGAGAAAAAGTTCCAGAACGTCATCGCCTTTAACGTCCACCTAGGTAACATAGGCAGGAAGCTGTGCCTCCACTGCAAGCAGTTGGTGCCCTTGGATTCGTTCGCGAAGCACGCAGTGAAGCACGGCGCAGGCCTGTACACTTGCAAACGGTGCAAACGCCTGTTCACGAACCAACCGAGCTACCGAAAGCACGTGGCGTCGTGCAAGCGAAAAGGCTCGCATACCTGCGTGGAGTGCTCACAAACGTTCGCCAGTGAATCCAACCTGATCACCCACTACGCTTCGAAGCACAACCAGCAGATCTGCCCGGCGTGCGGTAGGAAGTTCGTAAGCAAAACCTGCTTCAAGAACCACGCGAAAGTCTGCTTCGACTCCAAAGCGGACACGCCCAAGTACATCTGCGACTACTGCTCCAGGGAGTACACGTTCAAGAACGCCCTCCGTCTCCACATACAGCTGAAGCACTTGGTCGGGTGGAAGTACCAGTGCGACAAGTGCGGCAAAACGTTCGGAAACCCCGCGCACTTGAAAGAGCACGACAATATGCATAACCGTGTCGTGGACAGATACGTGTGTGGTATTTGTTCTGCCAAATATAGTACACGGCGAGGCTACGAACGGCACTACAAGAAACATTTTGACGGGAACGGTGAACTAGTCGCATTCGTTCCATCGGCCGGTTCGAGGAAACAGAAGGAGGAGAATGAGTCTCTTCCACCAGTTCCACCGGTTAGGCGAACCGCCAAAAAGATAGCTGTTAGCAAAGCACGCTGGGAACACGGTATTGCAGAGAATCTACCACGCTTAACACCACAACCTAATCTGGTATCGTTCAAGTAA
Protein Sequence: MSREVDIKALISHIVRGDGADKCRICMGDTSEGQVSLGDTVMMDGDRPVTLAELLEVITGVEVQIDDELPNGLCSFCSGSAIDAANFTVLCRQVHNKWKTTLLLLEAVPLPKNVSLNTKSIYAIVQDDKLTIVDEKKSESAKEPIKQTPLTPIHKQPTSLLKHKIKNKRRSGTLCPCQCPTCGKKFQYAHLLSLHLKESCDLLRACHICAQVMSREDLIKHMYLAHQTKPLLCKKCPAMFHLRMKYIKHVQTAHASGVCTCGECGRVFKSRYGFNAHQTVHIPKTCPACDELFRNQSCYRYHLTVCCNIGKTKRRLHVTKNRVTIEVKNRISMKKVRVGLLGGNAQNECICDYCGKKFLGRKFIMAHIQHVHMKNTHRPCPYCGKSLAAAHMTEHIKTHELVREYKCDHCNLVLKTRLGFIQHLRLHTGEKPYACNQCGQSFSASSRRSEHMKKFHNTDVLYKHPCDMCTAKFILPSQLKKHKASVHSISSGHAFECEVCHEKFGSCRGLIHHSRKHQKDVDHTLVPKRTSVNLITFPIEGFHLGTDLYRWSDQRALFQMEISPTLPGHVCSACVSTAMVTARFVQMCQAANEQWTGISEYLSKLGEAISNGAQSACVCIEGGAYKTIESVSRMRTTAKALRVVRRYLPKTTDQQRGSSTDKNLQCPECEKKFQNVIAFNVHLGNIGRKLCLHCKQLVPLDSFAKHAVKHGAGLYTCKRCKRLFTNQPSYRKHVASCKRKGSHTCVECSQTFASESNLITHYASKHNQQICPACGRKFVSKTCFKNHAKVCFDSKADTPKYICDYCSREYTFKNALRLHIQLKHLVGWKYQCDKCGKTFGNPAHLKEHDNMHNRVVDRYVCGICSAKYSTRRGYERHYKKHFDGNGELVAFVPSAGSRKQKEENESLPPVPPVRRTAKKIAVSKARWEHGIAENLPRLTPQPNLVSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -