Basic Information

Insect: Cataclysta lemnata
Gene Symbol: -
Assembly: GCA_963931975.1
Location: OZ008359.1:10960315-10963738[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0079 0.61 11.2 5.1 1 23 257 279 257 279 0.98

2 11 0.00065 0.05 14.6 2.0 1 21 287 307 287 310 0.90

3 11 0.09 6.9 7.9 0.1 2 23 317 338 316 338 0.96

4 11 7.4e-06 0.00056 20.7 2.8 1 23 344 366 344 366 0.98

5 11 1e-06 7.7e-05 23.5 0.8 1 23 372 394 372 394 0.96

6 11 5.2e-06 0.0004 21.2 0.3 1 23 400 422 400 422 0.99

7 11 6.2e-07 4.7e-05 24.1 0.5 1 23 428 450 428 450 0.98

8 11 4.2e-05 0.0032 18.4 0.4 1 23 456 478 456 478 0.98

9 11 5.3e-05 0.0041 18.0 2.1 1 21 484 504 484 506 0.96

10 11 3.1e-06 0.00024 21.9 0.1 1 23 512 534 512 534 0.99

11 11 0.018 1.3 10.1 0.0 5 23 556 574 554 574 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0079	0.61	11.2	5.1	1	23	257	279	257	279	0.98
2	11	0.00065	0.05	14.6	2.0	1	21	287	307	287	310	0.90
3	11	0.09	6.9	7.9	0.1	2	23	317	338	316	338	0.96
4	11	7.4e-06	0.00056	20.7	2.8	1	23	344	366	344	366	0.98
5	11	1e-06	7.7e-05	23.5	0.8	1	23	372	394	372	394	0.96
6	11	5.2e-06	0.0004	21.2	0.3	1	23	400	422	400	422	0.99
7	11	6.2e-07	4.7e-05	24.1	0.5	1	23	428	450	428	450	0.98
8	11	4.2e-05	0.0032	18.4	0.4	1	23	456	478	456	478	0.98
9	11	5.3e-05	0.0041	18.0	2.1	1	21	484	504	484	506	0.96
10	11	3.1e-06	0.00024	21.9	0.1	1	23	512	534	512	534	0.99
11	11	0.018	1.3	10.1	0.0	5	23	556	574	554	574	0.96

Sequence Information

Coding Sequence: ATGGAAGATGCTATAAAATTAAACCCAGATAACTTTTGTAGGGTGTGTTTGAGTCAATCAACAAATATGGCATTTTTGGAACAGAAATATAACGATAAATATCGAACACTGGCCGATGTGCTCTCTTTTGTTGTTAGTACAGATATTAAAATTGATACAGAGTTCCCGAAACGTATTTGTGGTGATTGTGAAACAATTATGTTCAAAGCGGAAGAGTTTAAGCAGCGCTGCGTTGAATCTGAAAAAGTTTTATGTGATATTTTTATGAGCAAAGCAACAGAATGGTCAATTACAATAAGTAATGTAAAAAAAGAGACCACACGCTCCAAAGGCGATAATCCACCTCATTTACCCCAATATTACGATTTTAGTAATGTAAAAGACCTAAACTCTATGAAATGTGAGaagaaaatagatttttgtggTACAAATGTAGCTAGATTAAGATTAAAAACTGCCATTAAAGATGAATTATCTGAGTTCTCTGATGATATAGCTGATGTTAACGGTGATGTAGATAATAAGGATGGTGGCAGCACTTCTAATTGTGATAGCAATGATGCGTTTTTTAATTCGGGAGATTTTAAAATTGGTATTGGTGCATTAGGTAccaaagtaataattaattccAAAGTTACggacaaaaataaatcaacagTACTTGTAAAATGTGAATGGTGTGAACGTCAATTTAAAAACGACAAATCATGTAAGAAACATAAAACCACATGTCCGCATGTACCAGTGATTGGGAACGACTTTGGGTATTTCCAATGTTCCCTGTGCATGAGgaaattcaagaaaaaaaattctctGATATCTCATATAAAGCACCATGAACTGAGGGACAGAATCAAGTACGTTTGTAGCACTTGCAAGCGTGAATTCAAACACCAAGGGCACTTAGACAATCACGTCGTTGCAATGCACAACAAAGATAAAGGTGTAACTTGCGAGTATTGTCTGTCAGTATTTCCCACCGATGAAGCATTAGAAGTCCACAAGAAGGAGCACAGCGACGAGAAGAGACACCGCTGTAAAGTATGCAATAAAGCTTTCAATATGCTGTCGACATTAACGGATCATTTACGTACTCACACCGGAGAGAAACCTTTCTTGTGTTCCGTGTGTGGACGAGGGTTTAGTCAGAAAACGAATTTAGGGCAACACATGAGAAGACACCTTGGCTTGAAGCCGTTTAAATGTAAAGAGTGTGATAGAGgATTCGTCTCCAAAGGGGAACTGGACGCCCACGAGCGCAAACACAGCGGTGCCCATCCGTTTGTGTGCACTGACTGCGGGAACGGGTTCACCACCTCCAGCTCGTTGGTGAAGCATCGCAGGATTCACACCGGGGAGAGGCCGTACGCTTGCGACCTGTGCCCCATGAAGTTTTCTGCGTCAGGCACCCTGAAGAACCACAGAAGGACCCACACGGGCGAGAAACCGTACCAGTGCTCGTACTGCGAGAAGGCGTTCGTCCAGCGCCAGGACCTCGTCTCCCACATCCGCTGCCACACGGGGGAGAGGCCCTACGTCTGTTCGGTATGCGGCCAGGCCTTCAGGAAGGCTGCTGGTTTGAAAACTCATGTTCGAATGCATAAAGAACACTTGGATATGGCTGGAGTGTTAACTGGGGTGCCAGGCTTTGAGGGCAAGACCAGCGTGTGCGGTCAGGCGTTCAGGAAGGCCGCAGGCGTGAAGACTCACGTGAGGATGCATAAGGAGCACCTAGATATGGCCGGGGTGCAGGGCTTCGAGGGCAGTTAG
Protein Sequence: MEDAIKLNPDNFCRVCLSQSTNMAFLEQKYNDKYRTLADVLSFVVSTDIKIDTEFPKRICGDCETIMFKAEEFKQRCVESEKVLCDIFMSKATEWSITISNVKKETTRSKGDNPPHLPQYYDFSNVKDLNSMKCEKKIDFCGTNVARLRLKTAIKDELSEFSDDIADVNGDVDNKDGGSTSNCDSNDAFFNSGDFKIGIGALGTKVIINSKVTDKNKSTVLVKCEWCERQFKNDKSCKKHKTTCPHVPVIGNDFGYFQCSLCMRKFKKKNSLISHIKHHELRDRIKYVCSTCKREFKHQGHLDNHVVAMHNKDKGVTCEYCLSVFPTDEALEVHKKEHSDEKRHRCKVCNKAFNMLSTLTDHLRTHTGEKPFLCSVCGRGFSQKTNLGQHMRRHLGLKPFKCKECDRGFVSKGELDAHERKHSGAHPFVCTDCGNGFTTSSSLVKHRRIHTGERPYACDLCPMKFSASGTLKNHRRTHTGEKPYQCSYCEKAFVQRQDLVSHIRCHTGERPYVCSVCGQAFRKAAGLKTHVRMHKEHLDMAGVLTGVPGFEGKTSVCGQAFRKAAGVKTHVRMHKEHLDMAGVQGFEGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -