Basic Information

Insect: Cataclysta lemnata
Gene Symbol: -
Assembly: GCA_963931975.1
Location: OZ008346.1:10965895-10976944[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.034 2.6 9.2 2.8 1 23 231 254 231 254 0.96

2 11 0.0003 0.023 15.7 2.1 1 23 261 283 261 283 0.95

3 11 3.5e-05 0.0027 18.6 2.1 2 23 290 311 289 311 0.96

4 11 8e-06 0.00061 20.6 2.5 1 23 317 339 317 339 0.99

5 11 9e-06 0.00068 20.5 0.1 1 23 348 370 348 370 0.98

6 11 7.1e-06 0.00054 20.8 0.3 1 23 376 398 376 398 0.98

7 11 0.00049 0.037 15.0 4.8 1 23 404 426 404 426 0.98

8 11 3.7e-09 2.9e-07 31.1 1.0 1 23 432 454 432 454 0.99

9 11 1.3e-07 1e-05 26.3 1.0 1 23 460 482 460 482 0.99

10 11 4.9e-05 0.0038 18.2 0.8 1 23 488 509 488 509 0.97

11 11 0.043 3.3 8.9 2.4 1 23 515 537 515 537 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.034	2.6	9.2	2.8	1	23	231	254	231	254	0.96
2	11	0.0003	0.023	15.7	2.1	1	23	261	283	261	283	0.95
3	11	3.5e-05	0.0027	18.6	2.1	2	23	290	311	289	311	0.96
4	11	8e-06	0.00061	20.6	2.5	1	23	317	339	317	339	0.99
5	11	9e-06	0.00068	20.5	0.1	1	23	348	370	348	370	0.98
6	11	7.1e-06	0.00054	20.8	0.3	1	23	376	398	376	398	0.98
7	11	0.00049	0.037	15.0	4.8	1	23	404	426	404	426	0.98
8	11	3.7e-09	2.9e-07	31.1	1.0	1	23	432	454	432	454	0.99
9	11	1.3e-07	1e-05	26.3	1.0	1	23	460	482	460	482	0.99
10	11	4.9e-05	0.0038	18.2	0.8	1	23	488	509	488	509	0.97
11	11	0.043	3.3	8.9	2.4	1	23	515	537	515	537	0.93

Sequence Information

Coding Sequence: ATGGATACCGAGAATGATTTTGATGCAGCAAAAACAGAAAATTGTCTAGAAACCGAGGTTCCTTACGATGCATATCATAGGGAACGCCTAATACAATGCCTAGGCTCAAATGAAAGCTTAGAAAAGTTTTGTAGAATATGCTTATCATCTAATGAATCAATGGTATCTCTGTTCTCACCAATATACGACAATATGTGCCTAGCAGATTTATTAAACACTTTAATGACAACTAAAataatCTCTGATAGCATAATGTTAAATCAAATATGCTTGAAATGTCAATCTGAATTAGTTAAAAGCTATAATTTTAAGATAAAATGTGAGAAAACAGAATGTATACTGCAATCAATACTAGATGATCAATTTGTTCAAGTTGAGGAAAATAATGAATCCTCTAGtgAAAATTTACAAAGCAAAAGAGAAAATATTAAACATCCATTAACTTCTATTTATGAagaattagaaataaaaaatgagcTGGATGAAGCTGACGCAGTAGAAGATATTCAGTATTCAGAAGATTTCAATGATATAGAAAGTGAACAAGAAGAACTGTGCATCGTCCAAGATTTAGAAAATATAAAGgaTGATGCTGTAAATATCTCCATATCTGATTCATCTTCATTACTACAGGAAATATcagatgaaaataaattaacactaaAAAAAGCCAAAGGCACTCATCCAGTCTTCACTTGCAACATATGTTTTGAGAAATTCAGCAAAATCAAACGTTACAAGTTGCATATAAAACAGATGCATCAAAGCGAAGAGTTTTCTCATCCATGCCGGCAGTGCAAAGAAGTTTTCAGTAGTCAGCATGACTTGCAATTACATTTAGCACTGCACATGGCTGGCCCCATGTGGAAATGCAAAGGATGCTCAAAAGAATTTAGAGttCGATCAATGCTGAAAAGACACCTTTTTCGCCATATGGAGTCCAAGCGGTTCAAGTGCTCCTCCTGTGACAAATCATTCACCGAGTTCTACGCGTTACGGCGACACACCCGCGTGCACACCGGCGAAATTGTCGAGAAGAAATATGTTTGCACCATATGCGACAAAAGGTATAGCGAGAACAACTTGCTAGCCGCCCACATGGCTCGGCACAACAGCGAGCGCCCGTTCGTGTGCGCGACTTGCGGCAAGGCCTTCGTCTCATCGCGTCTCCTCAATTCGCATCGCAAAGTGCACTCGGACTACAAGCAGTACGCATGTGAATTTTGCGATAAAAGATTCCGCCACGACTCCACCCGGAACACCCACCAGAGGACCCACACTGGCGAGAAGCCCTACGTGTGCTCAGCCTGCGGAAAGACCTTCATACAGAACTCGAACTTGCGCCGACACATGCGAACACACACCGGAGAGAAGCCCTACGTATGTGAGAAATGTGACAAGACGTTTACATCGGGATCGTCGCTGAAGATTCATTTGCGCACACACACTGGCGAGAAACCTTATAGCTGTAAAGTATGTGGCAAAAGGTTCGCGCGCATGGACCTGAAAGCGCACATGCGTCAGCACACCGGTGAGCGGCCGCATGCATGTAGCGCCTGTCCCAAGACGTTCGTCACCGCGACACGGTTACGGGACCACTGCCGCATACATACCGTTGGGTCGGTTGCGATCGATCTTGGAGTCCAAGAAAAGGAAAATGGCGATGGCGGGTGCTGCGGTGTCCCTTATGCCGATGTTAGCGCAATACTAAGCGACTTGAAAGCAATTGACGTCGATGTGGATGAGGAGGACATGATATGCTACCTGTTATCATCTATGCCAAAGGAGTTTGACAATGTAATCACCTCAATAGAAACGATGGCTACAGAGAAAAAGTTAAGCTTTGATTTTGTAAAAGCGAGAAAGAGGGTCACAAATCATATGAATGCAAAGAAGGTAAGACAAGAGAAAATTATAGAGGTAGAAGTCAAAATAGTCGTCATTTTACTTACCGGAGCCGAAGAGGAGGTCGAGCTCAAGGAAGAGGATTTCGTGGAAGGTCAGATGGACAAGGAGCTACAGCACTAG
Protein Sequence: MDTENDFDAAKTENCLETEVPYDAYHRERLIQCLGSNESLEKFCRICLSSNESMVSLFSPIYDNMCLADLLNTLMTTKIISDSIMLNQICLKCQSELVKSYNFKIKCEKTECILQSILDDQFVQVEENNESSSENLQSKRENIKHPLTSIYEELEIKNELDEADAVEDIQYSEDFNDIESEQEELCIVQDLENIKDDAVNISISDSSSLLQEISDENKLTLKKAKGTHPVFTCNICFEKFSKIKRYKLHIKQMHQSEEFSHPCRQCKEVFSSQHDLQLHLALHMAGPMWKCKGCSKEFRVRSMLKRHLFRHMESKRFKCSSCDKSFTEFYALRRHTRVHTGEIVEKKYVCTICDKRYSENNLLAAHMARHNSERPFVCATCGKAFVSSRLLNSHRKVHSDYKQYACEFCDKRFRHDSTRNTHQRTHTGEKPYVCSACGKTFIQNSNLRRHMRTHTGEKPYVCEKCDKTFTSGSSLKIHLRTHTGEKPYSCKVCGKRFARMDLKAHMRQHTGERPHACSACPKTFVTATRLRDHCRIHTVGSVAIDLGVQEKENGDGGCCGVPYADVSAILSDLKAIDVDVDEEDMICYLLSSMPKEFDNVITSIETMATEKKLSFDFVKARKRVTNHMNAKKVRQEKIIEVEVKIVVILLTGAEEEVELKEEDFVEGQMDKELQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -