Clem021458.1
Basic Information
- Insect
- Cataclysta lemnata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963931975.1
- Location
- OZ008361.1:2642800-2662506[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-15 8.6e-12 45.1 0.0 1 39 160 199 160 205 0.92 2 2 4.4e-09 5.8e-06 26.5 0.1 1 26 362 387 362 388 0.96
Sequence Information
- Coding Sequence
- ATGGCGGAAAAGAATCCAGTCCTTAATTTGAACGCATCGCAACCGATTAACTGTGCGTCGGAGTCAGACAGCAGCTCGGTGTCGGGCGCCAAGAGCCCGGCGGGCGCGCCGCCCCTGCTGCAGCATCTACTACAGCTGCAGCTGCAGGCGCAGAGTCCGCAGGCCATAGCGCAGTTCCAGCAGATGGTCGCGGCACTGGCAACTCTAGGCTCGGGGCTGGTGCCTCCGGCAGTACTCTCCCAAGTGTGGCTCATGCAGCGGCTAGCGCAGAACCGGCATGTTACAGACAGGCTCCCAGAATCGGGTGAGAAGCCTCCAACCTCGACATCTCCACCTCTTGCCGAGCAGCCTCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACACCTCCACCGGATGCGAAGACATTGGATAACAGGTTGAAGCGAACCGCCCTCGAGGTAGGCAACAATACAGCTCGGCGAGCGTACACCGACGACGAACTCCAGTCGGCATTACGCGACATCCAGTCGGGCCGGCTCGGCACCCGGCGCGCCGCGGTCGTCTACGGCATACCCCGGTCCACCCTTCGCAACAAGGTCAACAAATTCGGCCTCGCCTCCGAGCAGCACGACTCCGAGCCCGACAGCGACCCGGACCGGCCCGAGTCCCCCCCGTCGGTGATCCTCAAAATACCAACCTTCCCCCCGCCCGACGAGAAAAGCCCCTCCCCGGCGAGTCAACCAGTGACTCCAGTCACACCCGTCACCCCGCTCATCCCACCCCCCCAGCCGCCGCTCAACCCGCCCCCGCTGCCGACGTTCTTCGCGGACCCACCCTCCAACCAGCACCTCTTCACGTCCATCAACGACGTCATCGTGCGGAGCATCAGCCAGAAGTTCCAGCAGCTGCCCGACCGGCCGCCGCAGCCGCAAGACTTGCAGTACATGCGCGCGCCTGACCGGCACGTGTCCGTGATCAAAACGCCCCCCGACCAGCGCAGCTACCCGGCGCCGTGCAACTCGAAGGCCGCCAACAACGGGCAGCCTGCCACCGGCAAAGGCACGCGGCCCAAGCGAGGCAAGTACCGCAACTACGATAGGGATTCCCTCGTGGAGGCGGTCAAGGCCGTGCAGCGCGGCGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGCGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGA
- Protein Sequence
- MAEKNPVLNLNASQPINCASESDSSSVSGAKSPAGAPPLLQHLLQLQLQAQSPQAIAQFQQMVAALATLGSGLVPPAVLSQVWLMQRLAQNRHVTDRLPESGEKPPTSTSPPLAEQPLDLSAKSTSSTSGTPPPDAKTLDNRLKRTALEVGNNTARRAYTDDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLASEQHDSEPDSDPDRPESPPSVILKIPTFPPPDEKSPSPASQPVTPVTPVTPLIPPPQPPLNPPPLPTFFADPPSNQHLFTSINDVIVRSISQKFQQLPDRPPQPQDLQYMRAPDRHVSVIKTPPDQRSYPAPCNSKAANNGQPATGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYAACRTPRSSTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -