Cbif007405.1
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- gata4_1
- Assembly
- GCA_963920755.1
- Location
- OY987195.1:18839365-18845518[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-17 8.5e-14 51.0 2.5 1 34 270 302 270 304 0.96 2 2 1.4e-18 3.6e-15 55.4 6.4 1 35 326 359 326 360 0.97
Sequence Information
- Coding Sequence
- ATGAGTGAAGACACCAATCCAACCAACGACGATGTTAAACCCGCTGTTAAACCTGAGGAAGAGGTTACAGAACCGGTGGAACAACCGTCGGTTATAAGGCGAAGACATGGAATCATTACAACGGAAGGTACTATCGAAGAAAGTACAGACGCTACGCAAGAAGAAATCAAACACTCGCCTTCGGAGGCGAATGAACACAACTACAGCCATACTGTAGAATCAAACCCTCCAAGTGATCCTCCACCACCTCCATATACCCCACAGGAATACATAATAACCGCTGCAAACGGCGAGCAATCCCAGATATTCCTACAATCTTCCCCAGGCCCAAATTCACCTTATGGACAACACCACCCGGCAACGCTTTTAATAACAGCGGCACATAATGGAGGGACGGATGAAAACCAAAACCTGGCAGATGGTTCTTATGTTATGGGGTATACTAATGGTTCCAATGGGGCCCAATGGGGTAATAATTACCAGTTCCAGCAAGGGTACGCTGGAGGGGCGGAAACAGCGACGGGAGCAAACGGTGCCCTTTGTGGGAATGATCCGAACCTGGGGCAAGCTTTTGCAGACGAGTACCAATCGCAACAACCATGCACAATATACTCAGCAACCGGCAACCAAGTCGCTCACATTGACCCCGCTTGGGAGAGATCCTCCCAACTCCGTATGCAAGAGGAGTACTACCACCACCAACAGGACGGTCACCGCGGCGGCCCCTCCACGTCCGCCTACGACCCACATCAGCAGTGGCAGCACCCTGGCCATCACCACGTAGCGGAGGTGAATATTGTCAAAGAATGCGTGAATTGTGGCGCCAGCGTGACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTATTTGTGCAATGCTTGTGGTCTCTATAATCGGATTAATGGGATTAATCGCCCGCCTGTGCGTACCTCCAAAAAACCTCAGGTGaatggAACGCGTAGATCAGGTGTTTCTTGTGCTAATTGCCAAACGACCACTACAACTTTATGGAGGAGAAATAACCAAGGAGAGCCTGTTTGTAATGCTTGTGGACTTTACTTTAAACTTCATAACGTCAACCGGCCACCATCCATGAAAAAAGAAGGAATACAAACAAGAAAACGAAGACCTAAGAGCTCAGGGATAAATTCAATGAGCCCGAGTCCTTCTACTCCCTATTTGAACCAAAGAGtggTAAATCAACCGAGTACAAGTTACCAGTTTCAACAGAGCCATGCACAAAATGATGGTTACCAGTTACCAAATCATATtcagtataataataatgtaaatAATCATCAGATACATGGGGAAAGAATGGCTCATCTGCCCTTGCACCATGAcGTGCCTCCCCTGCAACCTGTGATCCTAAatgaaattttgcaaacagaAGAACAAGCGAGTGTTATAACATCTACTTCGCAGCAAAATCGTTATCAAATAGCACATCATGAAAATGATAATTCAGATAGCAACACGGACCATGAACTGCATCCTGATGTGGAAAAATATCACGAATAA
- Protein Sequence
- MSEDTNPTNDDVKPAVKPEEEVTEPVEQPSVIRRRHGIITTEGTIEESTDATQEEIKHSPSEANEHNYSHTVESNPPSDPPPPPYTPQEYIITAANGEQSQIFLQSSPGPNSPYGQHHPATLLITAAHNGGTDENQNLADGSYVMGYTNGSNGAQWGNNYQFQQGYAGGAETATGANGALCGNDPNLGQAFADEYQSQQPCTIYSATGNQVAHIDPAWERSSQLRMQEEYYHHQQDGHRGGPSTSAYDPHQQWQHPGHHHVAEVNIVKECVNCGASVTPLWRRDGTGHYLCNACGLYNRINGINRPPVRTSKKPQVNGTRRSGVSCANCQTTTTTLWRRNNQGEPVCNACGLYFKLHNVNRPPSMKKEGIQTRKRRPKSSGINSMSPSPSTPYLNQRVVNQPSTSYQFQQSHAQNDGYQLPNHIQYNNNVNNHQIHGERMAHLPLHHDVPPLQPVILNEILQTEEQASVITSTSQQNRYQIAHHENDNSDSNTDHELHPDVEKYHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -