Cbif007406.1
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- pnr_1
- Assembly
- GCA_963920755.1
- Location
- OY987195.1:18881195-18887934[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-18 8.7e-15 54.2 3.2 1 34 135 167 135 169 0.97 2 2 2.5e-19 6.3e-16 57.8 5.8 1 35 189 222 189 223 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACACAAGCACCCCAACCAACAGCTACAGCGACGCCAACACCTCCTTCCATCACCAGCACCTGGGGCACCAGAGCCCCGTCTACCGCCCCGTAGCTAGTCAGTACCCCACCTCCGCTGCCTCAAGCGGACACTTTGGTACACCTGGGGCACATCACCAGGGCACATGGGCCCATGCTGCAGCTTCTGGTGGGTATGGACACGACATGGGGCAAAGTGCTGCACATGCTGCGGCATTGGGACATGGAGGCGCGCATGCGTCTGCGGCACTAAGTGCTGGGCAGTTTTACGCGCAGAACATGATGATGTCGTCCTGGAGGGCGTATGATGGTAGTGGGTTTCAGAGGAGCTCGCCTTATGATGGAGCTATGGAATTTCAGTTCGGTGAAGGACGAGAATGTGTAAACTGTGGCGCCATCTCTACGCCATTGTGGCGACGAGACGGCACCGGACATTATCTTTGTAATGCATGCGGGCTTTATCATAAAATGAACGGAATGAACCGGCCACTCATTAAACCTTCCAAAAGACTGACAGCAACAAGAAGACTCGGCTTATGTTGCACAAACTGCGGCACCCGCACAACGACGCTTTGGCGCCGCAACAACGACGGCGAGCCCGTTTGCAACGCCTGCGGGCTCTACTTCAAGCTCCACGGCGTGAACCGACCTTTAGCCATGCGTAAAGACGGCATCCAGACCCGAAAACGTAAACCGAAGAAACCAGCCGGCGAGCGAGATGAAACAAGCTCCGCCCAAAGCGAAGaaagtAAAGCGTCCCTCGGCCACCCCCCGAATCAACACCCCTCGCCGCAACTACCCTTAACTCAAAACCACCCCCATAATACCCAGACCGAGAGCAAAAGTCCCCTCCACATGGACCGACCATATTTAGGGCAAACAAGCCTTTTACCATCTACCCCTAACACGATAAAAAGTGAACCTATGTACGATTACAATTGTTTGCAAAATCAGTACCCTTATCAACAAATATTCGGGTTTCCTGGAACCGGAAGCGGCCCACCGGAAGTTGCGTACCACCATCAGCATCACGTGACTGCGGCTGCCAAATTGATGGCATCGACTTAA
- Protein Sequence
- MFHTSTPTNSYSDANTSFHHQHLGHQSPVYRPVASQYPTSAASSGHFGTPGAHHQGTWAHAAASGGYGHDMGQSAAHAAALGHGGAHASAALSAGQFYAQNMMMSSWRAYDGSGFQRSSPYDGAMEFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKPAGERDETSSAQSEESKASLGHPPNQHPSPQLPLTQNHPHNTQTESKSPLHMDRPYLGQTSLLPSTPNTIKSEPMYDYNCLQNQYPYQQIFGFPGTGSGPPEVAYHHQHHVTAAAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -