Basic Information

Insect: Cartodere bifasciata
Gene Symbol: ZNF236_1
Assembly: GCA_963920755.1
Location: OY987196.1:18230860-18243075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.002 0.094 13.4 0.7 2 23 78 99 77 99 0.96

2 23 0.00041 0.019 15.6 0.4 1 23 104 127 104 127 0.97

3 23 0.0017 0.079 13.6 0.5 2 23 132 153 131 153 0.96

4 23 0.016 0.74 10.5 5.3 1 23 159 181 159 181 0.96

5 23 1.7 81 4.1 0.2 2 23 191 212 190 212 0.94

6 23 0.002 0.091 13.4 2.6 1 23 239 261 239 261 0.97

7 23 0.002 0.093 13.4 4.3 1 20 267 286 267 289 0.95

8 23 0.00037 0.017 15.7 3.3 1 23 295 318 295 318 0.97

9 23 0.0085 0.39 11.4 2.0 1 23 328 351 328 351 0.97

10 23 0.00024 0.011 16.3 1.0 1 23 439 461 439 461 0.98

11 23 4.6e-05 0.0021 18.5 3.2 1 23 467 489 467 489 0.99

12 23 0.16 7.4 7.4 1.6 3 23 502 523 500 523 0.97

13 23 0.00042 0.019 15.5 6.8 1 23 576 598 576 598 0.96

14 23 0.00016 0.0073 16.9 3.9 1 23 603 625 603 625 0.98

15 23 5e-06 0.00023 21.6 1.0 1 23 631 653 631 653 0.98

16 23 0.015 0.71 10.6 4.5 1 23 659 681 659 681 0.97

17 23 2.5e-05 0.0012 19.4 0.4 3 23 996 1016 995 1016 0.97

18 23 0.0017 0.079 13.6 3.5 1 23 1022 1044 1022 1044 0.99

19 23 0.00014 0.0065 17.0 2.7 1 23 1051 1073 1051 1073 0.98

20 23 0.035 1.6 9.5 1.3 1 23 1079 1102 1079 1102 0.96

21 23 0.00046 0.021 15.4 2.1 2 23 1259 1280 1258 1280 0.96

22 23 0.0049 0.23 12.2 0.1 1 23 1285 1307 1285 1307 0.96

23 23 0.0054 0.25 12.0 1.6 3 22 1314 1333 1312 1333 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.002	0.094	13.4	0.7	2	23	78	99	77	99	0.96
2	23	0.00041	0.019	15.6	0.4	1	23	104	127	104	127	0.97
3	23	0.0017	0.079	13.6	0.5	2	23	132	153	131	153	0.96
4	23	0.016	0.74	10.5	5.3	1	23	159	181	159	181	0.96
5	23	1.7	81	4.1	0.2	2	23	191	212	190	212	0.94
6	23	0.002	0.091	13.4	2.6	1	23	239	261	239	261	0.97
7	23	0.002	0.093	13.4	4.3	1	20	267	286	267	289	0.95
8	23	0.00037	0.017	15.7	3.3	1	23	295	318	295	318	0.97
9	23	0.0085	0.39	11.4	2.0	1	23	328	351	328	351	0.97
10	23	0.00024	0.011	16.3	1.0	1	23	439	461	439	461	0.98
11	23	4.6e-05	0.0021	18.5	3.2	1	23	467	489	467	489	0.99
12	23	0.16	7.4	7.4	1.6	3	23	502	523	500	523	0.97
13	23	0.00042	0.019	15.5	6.8	1	23	576	598	576	598	0.96
14	23	0.00016	0.0073	16.9	3.9	1	23	603	625	603	625	0.98
15	23	5e-06	0.00023	21.6	1.0	1	23	631	653	631	653	0.98
16	23	0.015	0.71	10.6	4.5	1	23	659	681	659	681	0.97
17	23	2.5e-05	0.0012	19.4	0.4	3	23	996	1016	995	1016	0.97
18	23	0.0017	0.079	13.6	3.5	1	23	1022	1044	1022	1044	0.99
19	23	0.00014	0.0065	17.0	2.7	1	23	1051	1073	1051	1073	0.98
20	23	0.035	1.6	9.5	1.3	1	23	1079	1102	1079	1102	0.96
21	23	0.00046	0.021	15.4	2.1	2	23	1259	1280	1258	1280	0.96
22	23	0.0049	0.23	12.2	0.1	1	23	1285	1307	1285	1307	0.96
23	23	0.0054	0.25	12.0	1.6	3	22	1314	1333	1312	1333	0.95

Sequence Information

Coding Sequence: ATGGATAACATAACGCTTTACGTTCTACCAATTGGGGATAACGAAAATGGTTATATTATACCTGAAAATACTGCTAATGTGTTGTTAAGACAATTAGTACCTGGACAAACCATTATCCAAGGCGGAGAAGCGATCTCAATAAGCGAGCAAGCTAACTTTAGAATTGAAACTAGTGCTCCAAATGTAGAAAAATCTGAACCGAGTGCCTCCAAAAAGAGTAAATTTGCGCTCATGTGCACTATGTGCCAAATCGAATTTTCTAACGCAAAACAATACAAAGAACACATAacaaagcattttaaaaagaaatttaaatgtgaaaaGTGTGGAACAGGTTTTAATAAAGAAGTTAACTTCACAATACATGCATTAACAGAGCATTCTGATAATCTAACATGTCCTTTTTGTAATGTatcatttcaaagaaaagCAGCTTTTCAATCGCATGTAAAATTGCACAAAAGCGAAGAGACCCATTGTTGTGAGTTTTGCAAAGTGGAATTTTCGCATGAGgatgAATTGGTGAGAcatattaaaaatcataactTCCCAGTGGAGATAAGTGATCTTATTTGTAATTATTGCAAGTTGTTGTTACCAGATGTagaatcttacaaaaaacattTGGATTCGCacaaaaaattaactaaAACAATAACcaggaaaaaaataattcgcaGAAAAGTCCCAATTTCGCCGAACAAAAACTACAGTCATCGATGCTATGCATGCGATAAaacttttccaaaattttcgCTTTTGGAAAGACATAATCGGATCCATAGTGGAGAAAAGCCATTTTCGtgtggattttgcaataaacgatttaaccaaaaaggaactttaaaaattcatatGACATGCCATACTGGGTATAAGCCTTTTGTATGTACATTATGCCCTGccaaatttaaccaaaaatgtaatctGAAATCCCACGTTCGAAAAACGCACTCAGCTCCAAAAGATGGCGAAACGACATTTAAATGCAGTGAATGCGactgtctttttaaaaaaattggctcTTTGAATACTCACGTGAACAAAGCTCATTCCGCTTCAGTAATGGATCAACTTAAGCAACTCGAAAATGATCTTAATCCCATAGACTCTGGTTTAATAagctttaacaaaaatatgaataaaaataaccaagaagaaatttcaaatattaCTTATGAAGATGTAATTTCAAATGAAAATACGGAAAAATCGAAAGAATTGTATATTAAATTAACCGAAACAATTGGACGTCCTTCTGGCAGATTACGAACGTATTTGATAAAACTTGTAATGATTGATAATGTAAAAAACTATGAGTGTATGTATTgcaagaatttgtttaaaaaaccttCAGATTTATTGCGGCATCTCAGAATTCATACCAACGAAAGACCTTTTAAGTGCAAAGTGTGCTCATCCAATTTTCGAGTTAAATCAACACTAACCAAACATATGAACACTCACgatacaaaaaatacttcttcTTGCCAAAAATATGGGTGTTCTTCCTGTGATTCTACATTTACATCCATATTTGCTTACAACAAACACTTCAGgaCGAAACACAATACGAAAAAAGCACCAGACAAAACACTATCAATCGATGAAAAAATGGAAAACAATTCCCAAAATATTACAACTGATTTTGTTTTAAGGGAACCTTTATTAGAAACCACTCAaggattaCTTTCCTTAACCAAAAATGAATCTCCTTATCGACCCCACATCTGTCAAAAATGCAACGCCtcctttagtaaaaaaacccACTTAAAACGTCACATGTACTCTcatgaagaaaaaaagttcaagtGCACAAAATGCTCAAAATCGTATTCGTTTCAAAATGCCTTAAAAGACCATATGAAATTTCATAACCCAGTCAAAAAGTTCGAGTGTAGTGAATGTACCAAAAAATTCGTAACTAAATCACTGTTGCTTAGACATTTGATATCTCACAGCGATTCGACGCCCTTTATTTGTCCTTATTGCAACAAAAAATTCAAGAGCATAAACTTTTGCCGAAGACATATTAAGATACATAAAAGACACTTATTGGAAATGctGCAAGATGGCCAAACAAATGAGAATAATATTAACGACGAAATTCTTAAAAACCCTCCACCCAACAAAGCTACCAAAAATCAACAAGCATCAAAAACCGTTCCTTCAAAAAATAACGAATATCTTCTCACAACAAATATAACACCGAATAATGAAACTCCAGAATCAAACTCAGCCACTATAGACGTTGATAATACTTCCAAAGtctataatattaatttcgtAGACTTGGACATGAACGAAATGATCTATTCTCAAACAAAACTACAGaacTCGGACTCAATAATTTTGAACTCTATACAAGAGTTTCAAGAAAATAATCTTTTGTTTAATGTACAAAACAATCCAGTTGATTCTGGAAACAATTTGGAATTGTATACACCCATTTTTGCGTCGAATAGCACAGAAAATAATACTGAAATATCTGTGAAAGAAAAAGAAACTAATCCCGATAATACTTtgcaaaattataatattttagaaaatgttacCTTTTTGCCGAATGTAACTTTTACTTCTAATGGGGAAAATGAAtacaatattaatattttggaaGGGGCTACTGAACCCCAAGTGCAAAATGAtcaattaacaataatcaGTGGTGAAAACTTTGACCAAAATTACgtgattaatttttgcaatgcgtgcaaaaaaatattcaattcAAGTGACCATGTTTGCGAACCTGAATCTGAAAATGCAACAGAAGTTAGCGAAATCACAGTTCCAGAAAAGAATATTGATAACATTAATATTGATAATGAGCAGCAACAGTCGACAgaagaaatttttgttaatgatAACCCAATTAATGCAGAAAATGATCAACAAGAATTGACAAAAAGCGTTTCTGTAAAtgataaaattaagaaaaaaaatgttaaagacGAATCCAAAAAGAAATCTGTTGATAGGATATGCtcattttgtgaaaaagaatttaaaaaaccttcggacttgattcgTCATGTAAGAATCCACACAGGTGAAAAGCCATTTCAATGTAATATTTGCCAAAAACGCTTCGCGCTCAAATGTACTTTAGATTCCCATGTCAAAACTCATTCTAGTTTAGCCGAAAAATTTACCTGCACCAtttgtaacaaaaattttagttcGAAAACTAGTAGAAAACTGCACATGTCTATTCATAcagGTCAAAAACCATACAGTTGCAAGTTTTGTGATCTAAACTTTAGAACAATAGCCAATAAAAACTCTCATGAAAAATCAATTCATCTTAATCCGAAAAAAGTGCACAAACCAAAAGCAACAGACATTTTGGAAAAAGCAGCAATGGAAAGTTTGGACACCCTATTTGCTGGAAATAATCATGAAAATATTGAGAATAATGAAATACAGttatcAGCAACGGAAGCTATAGAAATCTTGAACCCATCAAACAATCTACCCTTTGACTCCAATCTAATTCAACCAATACAAAACGGAAGCCTAATTTTAACCGACGATAACGTGGCAAATATGGATCTTTTACAAAACACAGTCATTCATTTCATTGACTCCGATTCTATCTTAAATTTCACCAAGCAAACTGACTTAACCACTGAAAAAGATGCCTTGAACAACGGCGAGATTTACATAAACTGGCTACAAACACAACCATCTGACgatttaaatattcaaaacaACATCGAACAAAATTCGGTTCAGCAAAATATGGTTCAACATAATATTACTGAAAGTTTGGAGTGTGAAGTTTGTAAAAAGGAGTGCTCGTCCAAAGAAATGCTAAGGAAGCAtctaaatttacataaaaagaaGAAATTTATGTGTGGAGTGTGCTCGAAATTGTTTGAAAATGCGGATGATTTGGAAGTGCATTCGGATACGCATAATGGTGTTAGGACATTTTGTAATTATTGTGATAATGCGTTTTTTGACGAGCAACATTTGAAGACACATATGAAacgCTTTTCATCAAGCTCGACCGGCCGAGGGTTGAAAGGGTGGGTGGTAAGGGTGGATAGAGCATTTAGGGGTGTTCAACAGGTGGCTCGTAAAGTAGATATTCGCATATCAAGTCTCGACAGCTCGCCAATTCATGAACAAGAGTACATAATGcccctttaa
Protein Sequence: MDNITLYVLPIGDNENGYIIPENTANVLLRQLVPGQTIIQGGEAISISEQANFRIETSAPNVEKSEPSASKKSKFALMCTMCQIEFSNAKQYKEHITKHFKKKFKCEKCGTGFNKEVNFTIHALTEHSDNLTCPFCNVSFQRKAAFQSHVKLHKSEETHCCEFCKVEFSHEDELVRHIKNHNFPVEISDLICNYCKLLLPDVESYKKHLDSHKKLTKTITRKKIIRRKVPISPNKNYSHRCYACDKTFPKFSLLERHNRIHSGEKPFSCGFCNKRFNQKGTLKIHMTCHTGYKPFVCTLCPAKFNQKCNLKSHVRKTHSAPKDGETTFKCSECDCLFKKIGSLNTHVNKAHSASVMDQLKQLENDLNPIDSGLISFNKNMNKNNQEEISNITYEDVISNENTEKSKELYIKLTETIGRPSGRLRTYLIKLVMIDNVKNYECMYCKNLFKKPSDLLRHLRIHTNERPFKCKVCSSNFRVKSTLTKHMNTHDTKNTSSCQKYGCSSCDSTFTSIFAYNKHFRTKHNTKKAPDKTLSIDEKMENNSQNITTDFVLREPLLETTQGLLSLTKNESPYRPHICQKCNASFSKKTHLKRHMYSHEEKKFKCTKCSKSYSFQNALKDHMKFHNPVKKFECSECTKKFVTKSLLLRHLISHSDSTPFICPYCNKKFKSINFCRRHIKIHKRHLLEMLQDGQTNENNINDEILKNPPPNKATKNQQASKTVPSKNNEYLLTTNITPNNETPESNSATIDVDNTSKVYNINFVDLDMNEMIYSQTKLQNSDSIILNSIQEFQENNLLFNVQNNPVDSGNNLELYTPIFASNSTENNTEISVKEKETNPDNTLQNYNILENVTFLPNVTFTSNGENEYNINILEGATEPQVQNDQLTIISGENFDQNYVINFCNACKKIFNSSDHVCEPESENATEVSEITVPEKNIDNINIDNEQQQSTEEIFVNDNPINAENDQQELTKSVSVNDKIKKKNVKDESKKKSVDRICSFCEKEFKKPSDLIRHVRIHTGEKPFQCNICQKRFALKCTLDSHVKTHSSLAEKFTCTICNKNFSSKTSRKLHMSIHTGQKPYSCKFCDLNFRTIANKNSHEKSIHLNPKKVHKPKATDILEKAAMESLDTLFAGNNHENIENNEIQLSATEAIEILNPSNNLPFDSNLIQPIQNGSLILTDDNVANMDLLQNTVIHFIDSDSILNFTKQTDLTTEKDALNNGEIYINWLQTQPSDDLNIQNNIEQNSVQQNMVQHNITESLECEVCKKECSSKEMLRKHLNLHKKKKFMCGVCSKLFENADDLEVHSDTHNGVRTFCNYCDNAFFDEQHLKTHMKRFSSSSTGRGLKGWVVRVDRAFRGVQQVARKVDIRISSLDSSPIHEQEYIMPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -