Cbif009884.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Cartodere bifasciata
Gene Symbol
Zbtb41_2
Assembly
GCA_963920755.1
Location
OY987197.1:2707151-2715071[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 51 1.4 63 4.5 2.5 3 23 31 52 30 52 0.95
2 51 0.54 25 5.7 0.6 1 23 57 80 57 80 0.91
3 51 0.017 0.8 10.4 0.8 2 23 113 135 112 135 0.93
4 51 0.016 0.74 10.6 0.2 1 23 141 163 141 163 0.98
5 51 0.00055 0.025 15.2 4.3 1 21 192 212 192 215 0.96
6 51 0.026 1.2 9.9 0.1 1 23 221 243 221 243 0.98
7 51 0.00076 0.035 14.7 1.7 1 23 249 271 249 271 0.95
8 51 0.0023 0.11 13.2 0.8 1 23 278 301 278 301 0.96
9 51 1.3 62 4.5 3.8 1 23 340 363 340 363 0.98
10 51 9.3 4.3e+02 1.9 0.6 7 23 395 410 390 410 0.77
11 51 0.22 10 7.0 0.3 3 15 499 511 497 520 0.78
12 51 0.0067 0.31 11.7 0.7 1 23 526 548 526 548 0.99
13 51 0.4 18 6.2 0.2 1 23 549 572 549 572 0.91
14 51 0.00042 0.02 15.5 4.9 1 21 577 597 577 600 0.96
15 51 0.009 0.41 11.3 0.3 1 23 606 628 606 628 0.98
16 51 0.0044 0.2 12.3 1.9 1 23 634 656 634 656 0.95
17 51 0.0023 0.1 13.2 0.3 1 23 663 686 663 686 0.96
18 51 0.012 0.53 11.0 3.0 3 23 780 801 778 801 0.91
19 51 0.19 8.6 7.2 0.0 2 23 809 829 808 829 0.95
20 51 0.00093 0.043 14.4 0.4 1 23 835 858 835 858 0.97
21 51 4.2e-05 0.0019 18.7 0.2 2 23 865 886 864 886 0.97
22 51 0.00045 0.021 15.4 2.0 1 23 892 914 892 914 0.97
23 51 3.3 1.5e+02 3.3 0.1 2 23 956 976 955 976 0.88
24 51 1.6e-05 0.00076 20.0 0.7 1 23 982 1005 982 1005 0.96
25 51 5.1e-05 0.0024 18.4 2.1 1 23 1025 1048 1025 1048 0.96
26 51 0.29 13 6.6 3.3 2 23 1057 1077 1056 1077 0.96
27 51 4.2e-06 0.0002 21.8 2.5 1 23 1083 1106 1083 1106 0.94
28 51 0.0058 0.27 11.9 0.0 2 23 1113 1134 1112 1134 0.96
29 51 7.7 3.5e+02 2.1 0.2 2 13 1205 1216 1204 1227 0.65
30 51 5.4e-05 0.0025 18.3 3.2 1 23 1231 1254 1231 1254 0.91
31 51 0.0059 0.27 11.9 0.0 2 23 1261 1283 1260 1283 0.95
32 51 0.016 0.75 10.5 1.1 1 23 1289 1311 1289 1311 0.96
33 51 0.086 4 8.2 0.2 1 12 1318 1329 1318 1331 0.88
34 51 0.0049 0.23 12.2 0.2 2 23 1376 1397 1376 1397 0.97
35 51 0.0061 0.28 11.9 5.8 1 23 1403 1426 1403 1426 0.94
36 51 0.021 0.97 10.2 0.1 1 23 1432 1455 1432 1455 0.93
37 51 0.00019 0.0088 16.6 2.7 1 23 1460 1482 1460 1482 0.96
38 51 0.0033 0.15 12.7 1.0 2 23 1490 1512 1489 1512 0.95
39 51 0.0065 0.3 11.8 0.6 2 23 1542 1564 1542 1564 0.95
40 51 7.4 3.4e+02 2.2 0.1 2 23 1604 1624 1604 1624 0.89
41 51 0.0033 0.15 12.7 4.2 2 23 1631 1652 1630 1652 0.96
42 51 0.33 15 6.4 5.6 1 23 1661 1683 1661 1683 0.97
43 51 0.00026 0.012 16.2 5.1 1 23 1689 1712 1689 1712 0.98
44 51 8.8 4.1e+02 1.9 0.4 2 23 1725 1745 1724 1745 0.91
45 51 0.00041 0.019 15.6 2.6 2 23 1752 1773 1751 1773 0.96
46 51 0.00019 0.0086 16.6 5.2 1 23 1782 1804 1782 1804 0.98
47 51 0.00026 0.012 16.2 5.1 1 21 1810 1830 1810 1833 0.95
48 51 5 2.3e+02 2.7 0.9 2 23 1846 1866 1846 1866 0.92
49 51 0.00046 0.021 15.4 0.3 1 23 1872 1894 1872 1894 0.96
50 51 0.011 0.49 11.1 3.7 1 23 1899 1921 1899 1921 0.96
51 51 0.012 0.57 10.9 1.5 1 23 1928 1951 1928 1951 0.96

Sequence Information

Coding Sequence
ATGAAACAATTACTACTCCATATAAAAACTAGTCACAATTCTGGCAAAACTGTGCAAGATAACGAAACGAAGCACCTCAAACCCTCAGACTGTAAGGTCTGTGATTTCAAAGCCAAAAGACACGACATTTTACAACGCCACATGAAAGACAAACACGATAACCTTCCCTTTGTTTGCCTGGTCTGTTGTCTGAATTTTTCCGACAAAGAAACTCTGCTGCAACACATCGACGACATTCACAGCAAAAAGGTACTATGCCCGGCCTGTCCAATACTAGTAACGCCTCGTTGTCTGCCCGACCACCTTAAATTACACAACACAGTTGATGGAAAAGTGACCTGTGGCAAGTGCGAGAAGACATTTACTACTATAAAAGCTCTTGATATACACCTTTCGCATTTGCACGACGAAAACCAAAAGTTCACATGTGAACTGTGTTCCGAAGAGATAGTTACCAGAGCGAATTACAACAATCATTTAAAGATTCACTATGTGCGTAATGTTTGCGGGAAAAGTGGGATGTCGCCCAAGGAATACACATTCCATATGGAAATGATGCACTTGGACAAATCATACCAATGCGATCAATGCGGAAAAAGTTACAAGACAATGCATCTCCTTCGTATTCACATGCAGTGCAATCACGACAAGTCCCGCAAGTATGAATGCGTGGAGTGCAATAAGATTTTTGGTGGAAAGCAGCCGTACGACCGTCATATGATCGTGCACTCCAATGAGTTAATGTTCTTTTGCTCCTATTGTGCTAAGGGATTCAAGAGAAAGAAGACGTTGACTAATCATGAGGCGATTCACACGATTACCGATAAAAAGTTTGTATGTCCAGTGTGCCAGAAAACATATGCTTTGCATCGGTATCTAATGAATCATTTGTTGGTAACGCATAGGATTCGCGCGAAGAACGTTCCTCAACCAGCGACCGCGACGTCGTCTAAAGACTATTTGCTCGTGGACGTCGCACCAAAAAAgctcaaaataaaacaaacgaAACAACGCAAATACAAATGTACTAAGTGCTTCTTCGGCGCTAAATCCATTAGACAATTACATCTTCATATAAAAACGCGTCACAATCCTGACAAAACTGTGCAAGATAACGAAATTGAGCAAGACAAGGAAACTGTACAAGATAACAAAACCAAATATATAGCTTGCTACGTATGCCGCAAATTAATGACGGCATCTGACCTTCGCCAGCACCTCAAACTCCATGAATCCTCAACCAAAGATGCCGACTGTAAGGTCTgtgattttaaaaccaaacggTACGACGTTTTACAATGCCACATGATAGACAAACACGATAACATTCCATTTGTTTGCATGGTATGTTGTCTAAATTTTTCCGACGACGAAACTCTACAGCAACACCACGACGACATTCACAGCGAAAAGGTACTATGCCCGGCCTGTCCAATACTAGTAACGCCTCGTTGTCTGCCCGACCACCTTAAACAACACAATGAGAAATTAGACTGTGGCAAGTGCGGGAAGACATTTACCAATATAAGATCTCGTGATATACATTTCAGCGCATTGCACAACGAAAAGCAAAAGTTTACTTGTAAACTGTGTTCCGAAGAGATAATTACCAGAGCGAATTACAACAATCATTTAAAGACTCATTATGTGTGTGATGTTTGCGGGAAAAGTGAAATGTCGTCCAAGGAATTAAGATTCCATATGGAAATGATGCACTTGGACAAATCATACCAATGCGATCAATGCGGAAAAAGTTACAAGACGATGCACCTTCTTCGTGATCACATGCGGTGTAATCACGACAAGTCCCGCAAATATGAATGCGTAGAGTGCAATAAGATTTTTGGTGGAAAGCGGCCGTACGAACATCACATGATCGTGCATTCCACTGAGTTAAagttcttttgctccttttgtGCTAAGGGATTTAAGACAAAGAAATCGTTAAGTAAACATGAGATTATTCACACGGTTACCGATAAAAAGTTCGTATGTCCAGTTTGCCAAAAAACGTACGCTTTGTATCGGTATTTAATGAATCATTTGTTGGTAACGCATAGGATTCGCGCGAAGAATGTTCCTCAATCAGCGACTGCGACGTCGTCTAAAGACTATGCTCTTAATGAACCGCTTGTGGAGATCCACGAATCTTCAAGCGATCCAAGTTGGACACCTGAAGAGCCTGCGCAGATCGAATCtgaatcaaaattaaaaaaacacaaaaagtcTCTTAAGAAGagcaaaaagttaaaaaaggcTTTAAAGTCTaagaaaaaagataaaatctTAGCCGCTGCTCTAAAATACAAGGAAGGAGACAGTGACACTCCTTTAGAATGCATTCTTTGTcacaagttttttaaacaacttcaATCGCTGCGCAACCACATTCGTAACTTTCACACCAACAAACCAACGCGAGTAAGATGCGAAATTTGCAACAAGTCTGTAGCGGCCTCAAGTCTTTACGCGCATGTGTCAACGCACGCGGAAGAAAAACCCTTTCAGTGTGATCAGTGCGGAAGCGCTTTTGCTATCCGCTCGCGACTCACGAAACACATCCGTTTAAACCACAACGAAGATCAAAAGAAAACCTGCCCGATATGCGGAAAAATATTCAAAGGAACGTCTAGCGTTAACCGACACATGGCAATACACTCCAGTGAAAGGAAATACGTCTGTTCGTTTTGCGCAAAGGGTTTTAAGACAAAGCACAGTTTAGAAAAGCATGAATTAATTCACACGACGACGGATAAAATCCATAACGTTAAATACGATGAATTTAATGAAGAATTGAATACTCCGGACTTAGAAGAAGTTCTTGAGGAACCCCGCGACAAAGAATGTAAAAAACGCTCCAAACTAACATGCAACATCTGCCAAAAAGAAGTCTCGGCCAGTTACCTGCCGGATCATCTAAAACTACACTCCGAAGTCTCAGCATATTCATGCGATCAATGCGGGAAAccgtttaaaaatacaaatgctTTAAAATCGCACATGCTTCTCTATCACAAAGAAACCAACTTAATTCCTTGCCCATGTTGcggaaaaaaattcagagGTCGAAACCACGAATGCCctatttgccaaaaaaaattcactgTGCGTAATAACTTATTAAAACACAAGAGGTTGATTCACGCTGCCAATGTATACAAAAAATCCGAGTGCAAAATTTGCCACAAacaaataaccaaaaatagCCTAAGAAACCATCTTAAACTTCACTCGAGCGAATCTCCGTATCAGTGCGAACACTGTGGCAAAAGTTTCAAAACAAACATCCAACTTAGAAATCATACTGTTGTAAAACACACCGAGGAACTTAAAAAACCTTGCTCAATTTGTAGTAAGGTCTTTATGGGAGCAGGTCCTTTAAAAGCTCACATGGGTACCCATGCAACCGAGCGGACGTTCATTTGTGCTGCTCCAAAAGACCAGATAGCATTTGGGAAACACTTTATGGCAAACAATGATGAACTGAAAGCAAATAGCAAACGTGGTAAACAAAAACGAATGAACAATAAACTCAATGCCAAACCCACAAAGGACCAAAAAGGAGCCCTTGAGGAGCGCCCCTATAATAAAGGCGAGAAACGATACAGATCAACTTGCAACATATGCCAAAAAGAAGTAACGACCTATTACATGCCGTACCACCTAAAAATACATTCCGAAGTCGCACCATACCAATGCGATCAGTGCGgaaagacatttaaaaacagaaaGCTCCTAAAGTCGCACTTCACTCTTTATCACGGCGAAACCAAGTTAATTCCTTGTCCGACCTGTAACCGGATATATAGAGGTCAAGGACGATTAAACGTCCATATACGTGAGGTCCATACTCAAGACTTGAACTATGTTTGCTCTTTTTGTGCAAAACGTTATAAATCCATGAAAGCTTTAAATAAGCACGAGACTATTCATACTCATTTGGAAAAGTTGTACGAATGTAATATTTGCGGAAGAAAATTTACGTTGCCTAGTGTTCAAGAGTTGAACAAAGAAAAGCCAAATAAGATTATTCAAAAGAAACCAAAGAACAACCATCAGAAAGATGACAATAAGccaaagaaacgtaaaaccaAACCAAAAATGCCAAACGGTAACCTCCTAAACGAATGCAACATATGCGGAAAACGCGTGAGTTCATCCGTTATCCTTAAAGAACACTTGAACACCCATTCAAACAACAAACCCCACCAATGCTTTAAATGCGGAAAGACCTTCAAGATCAAAGCGACACTCCGAAGTCACCATTTACAGAATCACAATGCAGCACATAGATTTGTTTGCGACCAGTGCGGACGTGTCATCGTTGGAAGAAACGCATTAAAACGACACAAAATGGATGTTCACGGGAATGGACAACATTTCTGTTCGTATTGTGGAAAAGGACTTAAAAATAAGTCTTCATTACAAAACCATGAGAAGATCCACACGGCTGGCGAAAAAACTCTTGAGTGTTATATTTGTCATAAAATGTTTGCAATAAGTCGGTATTTGCGTAACCATTTATTGGTAACGCATAGAATACGTGCTATTAATATGCCTGATGCTAATTGCGAAGACTCCAAAACTCTATTAGAACAAGACTTTCCTACAAAGAGCGAGGAAACCTGCAAAACTTGTGGAATTGGTTTAAAAAGTCGTTTCGCTTTAAATCGCCACATGTTCTCAGTTCATGGCGAATGGCTAATTGCGCCATACTCCGCTCCTATCTCTgaggtttttgtaaaaaacgaAGACATAAGCAGAGATTTTACCAGACGTAAATTTGCAATAGGCCGCGGTCAACGCGAAAAATGTCCTTACTGTGAATACGTATCGGGATACGGTCTTATGGAACAACATATCGATACGCACACCACGGAAAAGAATTGCTTCTGCAAGACGTGTGAAAAGGCGTTTCATAGACCATACGCCCTTAGGGTGCACGAGCGCTCTCATTTACCTCGCGAAGAGCGTTTTAGGCACGAGTGCCACATTTGCAAAAAGCGCATGTCTACTTTGCACGTCCTGCGCGAGCACATAAAGCTTCACTCCGAGGAATATTCCTATCAATGCGATGAATGCGAAAAGGGTTTTAAGGTAAAGTACCACTTGCGATATCACAAACGCAAGAAACATGGCAAAAAACCAACGGAACTCCGCGGGCGACTTAAAAAATGCCTTTACTGCGACTACGTAGCAGGGTACAGACTTATGGAACGGCATATGGATACGCACTCCTCAGAAAAGAAGTGCATGTGCAAGACTTGTGGAAAGTCGTTTTATCTGTCAGTTTCACTCAAAGCGCACGAGCGCTCCCACTTGCCCAACGAAGAGCGCTTCAAGTACGAGTGCCACATTTGCAAAAAGCGCTTGTCTAAAAACCACGATCTACAACGGCATATAAAGCTACATTCCGATGAACAGCCGTTCCAATGCGATGAATGCGGCAAGAGCTTTAAGACAATTTACAATCTCCGGTATCACAAGCGTTGTAAACATGGCGAGAATCCCACTGCTACTTATGGAAAACATGAAAAATGTCCTTGCTGTGACTACGTAGCGAGAAAAAGTCTGATGGAACTACACATGATAACACACTCCACAGAAAAAAGTTTCTTGTGCAAAATATGTGGGAAGGCATTTCGTTGGCCAAAGGGTCTCAAAGAGCACGAGCGCACTCATTTGCAGGAACGGCACTTTTGTTCGTATTGTGGAAAAGGACTGAAAAGTACGGCTTCGTTAAGGCACCATGAGAAGATTCACACAGCTGGCGAAAAGAATTTTGAGTGTTATGTTTGTCACAAAATGTTTGCGTTGAAGCGGTATTTGGGTAATCACTTGTTGATTACGCATAAAATACGCGCTGGTGATAGGGCTTCTTCTTCCGTCTAA
Protein Sequence
MKQLLLHIKTSHNSGKTVQDNETKHLKPSDCKVCDFKAKRHDILQRHMKDKHDNLPFVCLVCCLNFSDKETLLQHIDDIHSKKVLCPACPILVTPRCLPDHLKLHNTVDGKVTCGKCEKTFTTIKALDIHLSHLHDENQKFTCELCSEEIVTRANYNNHLKIHYVRNVCGKSGMSPKEYTFHMEMMHLDKSYQCDQCGKSYKTMHLLRIHMQCNHDKSRKYECVECNKIFGGKQPYDRHMIVHSNELMFFCSYCAKGFKRKKTLTNHEAIHTITDKKFVCPVCQKTYALHRYLMNHLLVTHRIRAKNVPQPATATSSKDYLLVDVAPKKLKIKQTKQRKYKCTKCFFGAKSIRQLHLHIKTRHNPDKTVQDNEIEQDKETVQDNKTKYIACYVCRKLMTASDLRQHLKLHESSTKDADCKVCDFKTKRYDVLQCHMIDKHDNIPFVCMVCCLNFSDDETLQQHHDDIHSEKVLCPACPILVTPRCLPDHLKQHNEKLDCGKCGKTFTNIRSRDIHFSALHNEKQKFTCKLCSEEIITRANYNNHLKTHYVCDVCGKSEMSSKELRFHMEMMHLDKSYQCDQCGKSYKTMHLLRDHMRCNHDKSRKYECVECNKIFGGKRPYEHHMIVHSTELKFFCSFCAKGFKTKKSLSKHEIIHTVTDKKFVCPVCQKTYALYRYLMNHLLVTHRIRAKNVPQSATATSSKDYALNEPLVEIHESSSDPSWTPEEPAQIESESKLKKHKKSLKKSKKLKKALKSKKKDKILAAALKYKEGDSDTPLECILCHKFFKQLQSLRNHIRNFHTNKPTRVRCEICNKSVAASSLYAHVSTHAEEKPFQCDQCGSAFAIRSRLTKHIRLNHNEDQKKTCPICGKIFKGTSSVNRHMAIHSSERKYVCSFCAKGFKTKHSLEKHELIHTTTDKIHNVKYDEFNEELNTPDLEEVLEEPRDKECKKRSKLTCNICQKEVSASYLPDHLKLHSEVSAYSCDQCGKPFKNTNALKSHMLLYHKETNLIPCPCCGKKFRGRNHECPICQKKFTVRNNLLKHKRLIHAANVYKKSECKICHKQITKNSLRNHLKLHSSESPYQCEHCGKSFKTNIQLRNHTVVKHTEELKKPCSICSKVFMGAGPLKAHMGTHATERTFICAAPKDQIAFGKHFMANNDELKANSKRGKQKRMNNKLNAKPTKDQKGALEERPYNKGEKRYRSTCNICQKEVTTYYMPYHLKIHSEVAPYQCDQCGKTFKNRKLLKSHFTLYHGETKLIPCPTCNRIYRGQGRLNVHIREVHTQDLNYVCSFCAKRYKSMKALNKHETIHTHLEKLYECNICGRKFTLPSVQELNKEKPNKIIQKKPKNNHQKDDNKPKKRKTKPKMPNGNLLNECNICGKRVSSSVILKEHLNTHSNNKPHQCFKCGKTFKIKATLRSHHLQNHNAAHRFVCDQCGRVIVGRNALKRHKMDVHGNGQHFCSYCGKGLKNKSSLQNHEKIHTAGEKTLECYICHKMFAISRYLRNHLLVTHRIRAINMPDANCEDSKTLLEQDFPTKSEETCKTCGIGLKSRFALNRHMFSVHGEWLIAPYSAPISEVFVKNEDISRDFTRRKFAIGRGQREKCPYCEYVSGYGLMEQHIDTHTTEKNCFCKTCEKAFHRPYALRVHERSHLPREERFRHECHICKKRMSTLHVLREHIKLHSEEYSYQCDECEKGFKVKYHLRYHKRKKHGKKPTELRGRLKKCLYCDYVAGYRLMERHMDTHSSEKKCMCKTCGKSFYLSVSLKAHERSHLPNEERFKYECHICKKRLSKNHDLQRHIKLHSDEQPFQCDECGKSFKTIYNLRYHKRCKHGENPTATYGKHEKCPCCDYVARKSLMELHMITHSTEKSFLCKICGKAFRWPKGLKEHERTHLQERHFCSYCGKGLKSTASLRHHEKIHTAGEKNFECYVCHKMFALKRYLGNHLLITHKIRAGDRASSSV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-