Cbif004832.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Cartodere bifasciata
Gene Symbol
Zfy1_1
Assembly
GCA_963920755.1
Location
OY987194.1:22610687-22618287[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 2.8e-06 0.00013 22.4 0.3 1 23 9 31 9 31 0.98
2 40 0.00033 0.015 15.8 0.9 2 23 37 58 36 58 0.98
3 40 9.6e-05 0.0044 17.5 1.8 1 23 67 90 67 90 0.96
4 40 0.0032 0.15 12.8 0.6 3 23 99 119 97 119 0.95
5 40 1.4e-05 0.00063 20.2 3.4 1 23 125 147 125 147 0.98
6 40 0.25 12 6.8 0.2 1 13 153 165 153 167 0.86
7 40 0.02 0.92 10.3 1.7 1 22 186 207 186 207 0.96
8 40 0.22 10 7.0 4.3 1 23 222 244 222 244 0.97
9 40 2.1e-05 0.00098 19.6 0.6 1 23 250 272 250 272 0.98
10 40 0.43 20 6.1 1.3 2 23 278 300 277 300 0.71
11 40 7.2e-05 0.0033 17.9 2.7 1 23 309 332 309 332 0.96
12 40 0.00066 0.03 14.9 0.5 3 23 341 361 339 361 0.95
13 40 0.52 24 5.8 1.2 2 23 381 403 380 403 0.66
14 40 7.1e-05 0.0033 17.9 3.7 1 23 412 435 412 435 0.96
15 40 0.00062 0.029 15.0 0.5 3 23 444 464 442 464 0.95
16 40 0.00093 0.043 14.4 0.2 1 20 490 509 490 511 0.96
17 40 0.022 1 10.1 1.6 1 19 521 539 521 541 0.97
18 40 5.2 2.4e+02 2.7 5.8 1 23 557 579 557 579 0.95
19 40 6.9e-05 0.0032 18.0 0.0 1 23 585 607 585 607 0.98
20 40 0.017 0.77 10.5 0.6 2 23 613 635 612 635 0.93
21 40 0.0067 0.31 11.7 2.2 1 23 644 667 644 667 0.96
22 40 0.00051 0.023 15.3 0.4 3 23 676 696 674 696 0.95
23 40 1.5e-06 7e-05 23.2 4.5 1 23 702 724 702 724 0.98
24 40 0.21 9.5 7.1 0.1 1 13 730 742 730 744 0.87
25 40 0.0066 0.3 11.8 0.5 1 20 763 782 763 784 0.95
26 40 0.0038 0.18 12.5 0.8 1 20 794 813 794 815 0.96
27 40 0.00011 0.0049 17.4 0.0 1 23 858 880 858 880 0.97
28 40 0.35 16 6.3 3.4 2 23 886 908 885 908 0.83
29 40 0.00029 0.014 16.0 2.4 1 23 917 940 917 940 0.96
30 40 0.0012 0.057 14.1 0.9 3 23 949 969 947 969 0.96
31 40 5e-06 0.00023 21.6 2.5 1 23 975 997 975 997 0.98
32 40 1.1e-05 0.0005 20.5 0.2 1 21 1003 1023 1003 1024 0.93
33 40 1.1 49 4.8 0.5 1 20 1044 1063 1044 1064 0.91
34 40 1e-05 0.00046 20.6 0.6 1 23 1106 1128 1106 1128 0.97
35 40 0.28 13 6.6 1.5 2 23 1134 1156 1133 1156 0.72
36 40 0.0051 0.23 12.1 3.3 1 23 1165 1188 1165 1188 0.96
37 40 0.00011 0.0053 17.3 0.7 3 23 1197 1217 1195 1217 0.95
38 40 0.00067 0.031 14.9 2.0 1 23 1223 1245 1223 1245 0.97
39 40 7.5e-05 0.0035 17.9 0.6 1 23 1251 1273 1251 1273 0.96
40 40 0.0033 0.15 12.7 5.1 1 19 1279 1297 1279 1302 0.90

Sequence Information

Coding Sequence
ATGAAGCACTCCAACAGTTTACCTTACGCATGTGAAATATGTGGAAAAACCTTTACTTATTCTTCAGTTTTGATGGTTCACTTAAAAAGCCACAACCCGGTCCAAGTAAAGTGTCCTCATTgtcctaaaatttttatatcagATTATCCATTCCAAAAGCATGTTAAGACCCATGCCCCAGACTATGAAAAACCACAATATGAATGCTATACTTGTGGAAAGATTTACGAAAAAAAGGATAATTTACAACATCACATTTTCAGTGTACACATTCACAAGGAGCCCCAGcatttatgtaatttttgcGGCATGAAGTTAGTAACAGCCATTTCTTTAAAACGCCACATCATGATACATACTGGGGAAAAACCGTTTGTTTGTAAATATTGTGGAAAATGTTTCAATAAATCACAACTATTAGTTAGTCACACCAGGGTTCACACTAAGGAAAGGCCGTTTTTATGTAGTGAATGTCCGAAAACATTTGCTCAAAAgaatcTAGAAGCAACTGCCAGAAACCGGGGTCTCGGTCGACTTAAAACAAATTCGGATTCCTACAAATGTACGCAATGTCGTTATACGACTCCACGTAAAGATAGTTTTAGTTCTCATGTAAAGACTTGCCAGAGAAAATTCAATCGTCTCAAGCAAAGCAAAAAATTCTACGATTGTACGCTTtgtgatttcaaaacaactaAGCGTTACTATTTTAATTATCATGTTAAGAAGCACTCCAACAGTTTACCTCACGAATGTAAAATATGTGGACAAACCTTTCCTTATCCCTCATTTTTAGTGGTACACCTAAAAAGCCACGAAAAGCTCCAAGTAAAGTGTCCTCATTGTCCTAAAATTTTTCAATCAGATACGTATCCATTCCAAAGGCATGTTAAGTCTCATGCTCCAGACTATCAAAGACCACAATATGAATGCTATACCTGTGGAAAGACTTACgaaaaaaaggaaaatttaCGACATCACATTTTCAGTATACACATCCACAAGGAGCCCCAGCATTTATGTAATTACTGCGGCATGAAGTTAGTAACagcaatttctttaaaacgcCACATCATGATACATACTGGGGAAAAACCATTTGTTTTGGTACACCTAAAAAGCCACGAAAAGCTGCAAGTAAAGTGTCCTCATTGTCCTAAAATTTTTCAATCCGATACGTATCCATTCCAAAGCCATGTTAAGACTCATGCTCCAGACTATCAAAGACCACAATATAAATGCTATACCTGTGGAAAGACTTACgaaaaaaaggaaaatttaCGACATCACATTTTCAGTATACACATCCACAAGGAGCCTCAGCATTTATGCAATTATTGCGGCATGAAGTTGGCAACAGCCATTTCTTTAAAACGCCATATTATGATACATACTGGTGAAAAACCgaGTCTAAAAGCAGTTGCCAGAAAGCAGGGTCCCGGTCGACTAAAAACAAATCCGGATTTCTACAAATGTACTCAATGTCCTTATACCACTCCACGTAAAGATAGTTTAAAATCTCATGTAGAAGCTTGCACGAGAAGACTTAACCGTCCCACGTACAAATGTTCTCAATGTCCGTATACCACCTACCGTAAAGATAGTTTTCAATCTCATTCAGAAGCTTGCCAGAGAAGAATCGACCGTCTtaagcaaaaaagaaaaatccaCGAGTGTACGTTTTGCGATTTTAAGACACCTAagcgtttttattttaattaccaTGTGAAGAGACACTCCAACAGTTTTGATTATGCTTGTGAAATTTGTGGAATAACGTATCCTTATCCTTCTGGTTTAGTGGCACACCAAAAAATCCACAACAAAGTCCAAGTAAAATGTCCAGAGTGTCCTAAAATCTTTCAGTCAGATTCGTATCAGTTCAAAAGGCATGTTAAGTCTCATGCTCCAGACTATCAAAAACCACAATTTGAATGCTATACTTGTGCAAAGACATACGAAAAAAAGATTAATTTGCAACACCACATTTTTATGGTACACATCCACAAGGAGGGACAGCATTTATGTAGTGTTTGCGGCATGAAATTAGCAACACCCATTTCTTTAAAACGCCACATGATGATACACACTGGAGAGAAACCGTTTGTTTGCAAGTACTGTGGAAAATGTTTCAATAAATCATCACTACTTCGTAGTCACACCAGGGTTCACACTAAGGAAAGGCCGTATTTATGCAGTGAATGTCCGAAAACATTTGCGCAAAAgaaTCTAGAAGCAACTGCCGGAAAGCGGGGTCGTGGTCGACCAAAAACAAATCCAAATTCCTACAGATGTACGCAATGTCCTTATACCACCTACCGTAAAGATAGTTTTCAATCTCATGTAGAAGCTTGCACGAGAAGACTCAACCGTCCCACGTACAAATGTACTCAATGTCCTTATACCACCTACCGTAAGGATAGTTTTAACTCTCATCTAGAAGCTTGCCAGAGAAAACTCGACCGTCTCAagcaaagaaacaaaatcTACGATTGTACACTTTGCGATTTTAAGACAACTAAGCGTTTTCGTTTTAATTGCCATGTGAAGAAGCACTCCAACAGTTTTCCTCATGTATGTGAACTTTGTGGACAGACATTTCCTTATCCCTCAGCCTTAGGGGTACACCTAAAAAGCCACAACAAAGTCCAAGTAAAGTGTCCTCATTGTCCTAAAATCTTCCAGTCGGAGACGTATCAGTTCCAAAAGCATGTTAGGTCTCATGCTCCAGACTATCAAAGACCACAATATGAATGCTATACTTGTGGAAAGATATAcgaaaaaaagcaaaatttgcgACATCACATTTTTATGATACACATCCACAAGGAGCCCCAGCATTTATGTAGTTTTTGCGGCATGAAGTTAGCAACAccaatttctttaaaacgcCACATCATGACACATACTGGAGAGAAACCGTTTGTTTGCAAGTACTGTGGAAAATGTTTCAATAAATCGGCCCTACTAGTTAGTCACACCAGGGTTCACACTAAGGAAAGGCCGTTCTTATGTAGTGAGTGTCCGAAAACATTTGCCCAAAAGTCAGCTCTTAATGTGCACATGAAgaaTCTGGAAGAAATTTCGAAAAAGCAGGGTCCCCGTCAACTAACAATAAATTTGGAACCCTACAAATGTACGCTTTGTCCTTACACCTCTTACCGTGAAGATAGATTTAGTTCTCATGTAGAAGCTTGCAAAAGAggacttaaaaaaatcaaaaaattctaTGAATGTACACTTTgcgattttaaaacacacaagcgttgttattttaatatCCATGCAAAAAAGCACACGAACACCAGTTTCGAGCATGTATGTTCAGTATGTGAAAGAACCTTTCCTTATCCTTCAGCTTTGACGATGCACATGAAAAGCCATGGCAAAAAACAAGTAAAGTGCCCTCATTGTCCTAAAGCATTCCAGTCAGAAACAACTGATTTCAGAAATCATGTTAAATCTCATGCTCCAGACTATCAAAGACCACAATATCAGTGCTTTAATTGTGGAAATACATACGGAAAAAAGGACAGTTTGCGACATCACATTTTCATGACACACATCAACAAGGAGCCCCAGCATCTATGTAGTTTTTGCGGCAAGAAGTTGGCAACACCCTATGCTTTAAAACGCCACATCATGATACATACTGGGGAGAAACCGTTCGTTTGCAACGAGTGTGGAAAATGTTTCAATAAAAGTCAGATTTTAGCAAGTCACAAACGGGTTCACACTAAGGAAAAGCCGTATTTATGCAGCGAATGTCCGAATACATTTGCGAAAAAATCAACCCTTAATGTTCACATGAAGTTGCATAGAAAGGAAATGGATTATCAATGtactatttgttttaaaaagtttattagtCGTGCTCAACTGAAAAAACATTGTAGCAAAACCCATCTGACATTAACAGAATAA
Protein Sequence
MKHSNSLPYACEICGKTFTYSSVLMVHLKSHNPVQVKCPHCPKIFISDYPFQKHVKTHAPDYEKPQYECYTCGKIYEKKDNLQHHIFSVHIHKEPQHLCNFCGMKLVTAISLKRHIMIHTGEKPFVCKYCGKCFNKSQLLVSHTRVHTKERPFLCSECPKTFAQKNLEATARNRGLGRLKTNSDSYKCTQCRYTTPRKDSFSSHVKTCQRKFNRLKQSKKFYDCTLCDFKTTKRYYFNYHVKKHSNSLPHECKICGQTFPYPSFLVVHLKSHEKLQVKCPHCPKIFQSDTYPFQRHVKSHAPDYQRPQYECYTCGKTYEKKENLRHHIFSIHIHKEPQHLCNYCGMKLVTAISLKRHIMIHTGEKPFVLVHLKSHEKLQVKCPHCPKIFQSDTYPFQSHVKTHAPDYQRPQYKCYTCGKTYEKKENLRHHIFSIHIHKEPQHLCNYCGMKLATAISLKRHIMIHTGEKPSLKAVARKQGPGRLKTNPDFYKCTQCPYTTPRKDSLKSHVEACTRRLNRPTYKCSQCPYTTYRKDSFQSHSEACQRRIDRLKQKRKIHECTFCDFKTPKRFYFNYHVKRHSNSFDYACEICGITYPYPSGLVAHQKIHNKVQVKCPECPKIFQSDSYQFKRHVKSHAPDYQKPQFECYTCAKTYEKKINLQHHIFMVHIHKEGQHLCSVCGMKLATPISLKRHMMIHTGEKPFVCKYCGKCFNKSSLLRSHTRVHTKERPYLCSECPKTFAQKNLEATAGKRGRGRPKTNPNSYRCTQCPYTTYRKDSFQSHVEACTRRLNRPTYKCTQCPYTTYRKDSFNSHLEACQRKLDRLKQRNKIYDCTLCDFKTTKRFRFNCHVKKHSNSFPHVCELCGQTFPYPSALGVHLKSHNKVQVKCPHCPKIFQSETYQFQKHVRSHAPDYQRPQYECYTCGKIYEKKQNLRHHIFMIHIHKEPQHLCSFCGMKLATPISLKRHIMTHTGEKPFVCKYCGKCFNKSALLVSHTRVHTKERPFLCSECPKTFAQKSALNVHMKNLEEISKKQGPRQLTINLEPYKCTLCPYTSYREDRFSSHVEACKRGLKKIKKFYECTLCDFKTHKRCYFNIHAKKHTNTSFEHVCSVCERTFPYPSALTMHMKSHGKKQVKCPHCPKAFQSETTDFRNHVKSHAPDYQRPQYQCFNCGNTYGKKDSLRHHIFMTHINKEPQHLCSFCGKKLATPYALKRHIMIHTGEKPFVCNECGKCFNKSQILASHKRVHTKEKPYLCSECPNTFAKKSTLNVHMKLHRKEMDYQCTICFKKFISRAQLKKHCSKTHLTLTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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