Basic Information

Insect: Cartodere bifasciata
Gene Symbol: SCRT1_1
Assembly: GCA_963920755.1
Location: OY987194.1:28057074-28064255[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00077 0.81 9.9 0.6 11 38 262 286 258 291 0.85

2 5 0.041 43 4.4 0.5 17 28 299 310 289 323 0.79

3 5 0.0066 6.9 6.9 0.3 17 28 325 336 316 348 0.80

4 5 0.00028 0.29 11.3 0.3 19 41 355 374 342 376 0.88

5 5 0.036 38 4.6 2.9 14 43 378 404 373 405 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00077	0.81	9.9	0.6	11	38	262	286	258	291	0.85
2	5	0.041	43	4.4	0.5	17	28	299	310	289	323	0.79
3	5	0.0066	6.9	6.9	0.3	17	28	325	336	316	348	0.80
4	5	0.00028	0.29	11.3	0.3	19	41	355	374	342	376	0.88
5	5	0.036	38	4.6	2.9	14	43	378	404	373	405	0.88

Sequence Information

Coding Sequence: ATGCCGCGGTGCCTTATGGCTAAGAAGTGGAAGGCTTATCAGTGGCCTGAGCGCTCCGAACCCGTGCCACCGCAACCAACTACCGCGGAGGATGACGAGGAGATTGACGTTGTGGGGGATTCTGCCCCCGCTGCTGCGTGTTGGGGGCCCTCTAGCCCCACTGCGGGGGCCACGGCTCCAAGCCCGTCGCCCACTTCACCGCATGGGACTACCTTAATCTACaatgGCTATCTTCACGAACTTTCACCTTCAAGCTACACGAATATACCTTCCCGTAACAACGAGCATCAAACTCAAACCTACGCAACATTAAGAACGGTAATAGAGACCAAAGAAATCAATGAACAACTTCACCACCCTATCAGGCACAAAAAATCGCTTGCTATGACGTACACCAGTACAGGCGCGGCTCTGTCCTTACCACCGAAGAAGAAAGACATCTACCGTCCGTATTCCTTGGACGACAGGCCGGCATTACCGCCTATGCTACACCAAAGCGTAATTCGCGTACCGGCGGAAGAGGACCTGCACGCGGCGCATGCCATTTTGGACCTAAGCGCAAGCACAACGGTCTTCGTCACGCCACAAGTACAGGAGTACTCCACCACACCCGCGGTGGTAGTACCTGAAGACACCAAAAAGGTGGAAACGTTAGAGGACGGCGTGATAAAGAGCGGCAAAACCGTGGCCTACACCTACGAAGCGTTCTTCGTGAGCGACGGCCGATCCAAAAAGAAGCAACCTCCCCCAGAGGATACCCCAGTACCACCAAGCAAAATAATCTCAAACGATAAGCCAAAGTACAGCTGCACTGAATGCGGTAAGCAATACGCGACGTCAAGCAACCTCTCAAGGCACAAGCAAACGCATCGCTCCTTGGACTCGCAATCCGCTAAGAAGTGCATGACGTGCGGTAAGGCTTACGTCAGCATGCCTGCCCTAGCGATGCACGTCCTAACGCACAAGCTAGCGCACCGCTGTGGCGTTTGCGGGAAGCAGTTCTCGCGGCCGTGGTTGCTCCAAGGTCACTTGCGGTCGCACACCGGAGAGAAGCCGTACGGTTGCGCGCACTGCGGTAAGGCATTCGCTGATCGCTCCAACTTACGCGCGCACATGCAAACGCACTCGGCTGACAAGAACTTCGAGTGCACGCGTTGTCACAAAACCTTTGCGCTAAAGTCGTACCTCAACAAGCACTTGGAGTCAGCGTGCTTGAAGGATGAGCCTGGGAGTGGTTCGGACGAGATGAAGCTAGTGGCGCCATCTACGCCAGAGCCTATGTCGCCGCAGCCTACTGTTATAGCTACGCCTGTTCCCATACGCGTGTACGCTGGTTAA
Protein Sequence: MPRCLMAKKWKAYQWPERSEPVPPQPTTAEDDEEIDVVGDSAPAAACWGPSSPTAGATAPSPSPTSPHGTTLIYNGYLHELSPSSYTNIPSRNNEHQTQTYATLRTVIETKEINEQLHHPIRHKKSLAMTYTSTGAALSLPPKKKDIYRPYSLDDRPALPPMLHQSVIRVPAEEDLHAAHAILDLSASTTVFVTPQVQEYSTTPAVVVPEDTKKVETLEDGVIKSGKTVAYTYEAFFVSDGRSKKKQPPPEDTPVPPSKIISNDKPKYSCTECGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHVLTHKLAHRCGVCGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSADKNFECTRCHKTFALKSYLNKHLESACLKDEPGSGSDEMKLVAPSTPEPMSPQPTVIATPVPIRVYAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00278523;
90% Identity: iTF_00278523;
80% Identity: iTF_00278523;