Cbif007883.1
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- CAMTA1_1
- Assembly
- GCA_963920755.1
- Location
- OY987196.1:3473124-3484111[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-44 2.4e-40 137.0 0.5 7 116 41 148 37 148 0.97 2 2 0.66 6.6e+03 -3.0 0.0 32 54 285 307 274 325 0.63
Sequence Information
- Coding Sequence
- ATGTTTCTACGGTTTTTGCAAAATGAATTATCTCGAATGTATAGCAAACTAAAAAGATACGTTAAGGCAAGTAAAAACGCTACCGCCCTCTTTTGGAAGCACGTCAAATTAACAGTGCTTTTAGTGCAAAACgaaatcGCAGCTACCCTTATCAGTTTCGATCGTCACGCAGAATGGCAGAGTAAAGAGGTCAAAATAAGGCCAAAATCTGGATCGATGCTGCTCTACAGTAGGAAAAAAGTCCGTTATCGTCGTGATGGATATTGCTGGAAAAAAAGGAAAGATGGTAAAACTACCAGGGAAGACCATATGAAACTTAAAGTCCAAGGAACTGAGTGCATTTATGGTTGTTACGTCCACTCCGCAATTCTTCCAACGTTCCATCGACGATGCTACTGGCTCCTTCAGAATCCGGATATTGTCCTTGTTCATTATTTAAACGTACCTTATCCAGACGACAACAAATTAGCAGTTATAACACCAAGTTTATCGCTTTGGGCTGATAAAAAGGAATGGACGAAAGAAGAGTTGGTATCACAGCTCAAACCCATGTTCTTCAGCGAGGAGGAACCCGATTTAAACAACGAATTAGAAATATCGACTGCCGAGACGGTGGAAGCGATAGTAAGCCAATTAATGGAGAAGCAGCGAATCGCGCGACAAGCAGCTCTTGTCAAACAACTAGAGTGTGGATGCCCGGATTCAACATGCGCCGACGGTAAAAGTTGTTCGCATCCAATGCGTCGCATAACCTCAGCCAAAGACGTCCAACAATCCGTACAAACCACCACACCACTCTCGAGACCACCTAGTCGAGCTGACAACAACCAAGTTTCATCCACCACTGGCTCGAACAACACCAACAACGGAACAGGAATGTTAATCAACCACAACGCACCACGGGTTTACTCGCGCGAAAACAGAAACCACCTCCAAACTAGAGCAAATAGCGTCGCGACAAGCAATTGCTCTTCAAGTCGGAATACTCCACCTCTGGTTTTGAGCCTCTCCCAAATCCAAGGTGGTGGCGGACTTCTAATCCTAAACTCCAGCAACCAGTCCAATCAACACCATCACCAGAACATAGTAACACCAGTATCAGTCGCTAACTTCGGAGGAAGACATACTCCTCTGCAAAAGGTAGCCGAACAACGCAACGGACACTTGGTACTGAAACAGGAGATACTGGAACATCACGAGAAGCGGGACAAGATGGAAACTGCAGAGAATAACATCAGGATGTATGACTACGGGAGGAATAATCAGAATATTCACCAGCAACAAGCAACAGAAGTTGTGATGACAAGTGCTCCTTCAACACCAAGCAAACAAATGGATACATCGAACGGACATGAGGAGATCATTGATTTTAAGCAACATAACTACTGCAGCGAGACTGTTGTCCTTCTTGGTAAGAGTCCGGCAAAACCATTTCCATTTTAA
- Protein Sequence
- MFLRFLQNELSRMYSKLKRYVKASKNATALFWKHVKLTVLLVQNEIAATLISFDRHAEWQSKEVKIRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLSLWADKKEWTKEELVSQLKPMFFSEEEPDLNNELEISTAETVEAIVSQLMEKQRIARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKDVQQSVQTTTPLSRPPSRADNNQVSSTTGSNNTNNGTGMLINHNAPRVYSRENRNHLQTRANSVATSNCSSSRNTPPLVLSLSQIQGGGGLLILNSSNQSNQHHHQNIVTPVSVANFGGRHTPLQKVAEQRNGHLVLKQEILEHHEKRDKMETAENNIRMYDYGRNNQNIHQQQATEVVMTSAPSTPSKQMDTSNGHEEIIDFKQHNYCSETVVLLGKSPAKPFPF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -