Cbif007854.2
Basic Information
- Insect
- Cartodere bifasciata
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_963920755.1
- Location
- OY987196.1:2952220-2966605[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.99 1.2e+03 -0.6 0.0 20 30 166 176 162 178 0.85 2 3 8.4e-18 1e-14 54.1 0.0 1 45 294 339 294 339 0.95 3 3 1.5e-18 1.8e-15 56.5 0.0 1 43 633 676 633 678 0.95
Sequence Information
- Coding Sequence
- ATGGCGCGGAAGTgtTTGGAACGCATCGCTGAGGAGTTGATGGGTCGAAGGAAATGGAAACTGTACCAAGAGTCCATGTCCAGAAATTACCTACAACCACTAAACAACAACGCTGTCAAGCAAGAGAAACAATTCAACAATCACACCGCCGAAAAGGTGCAGAAAGAAGTAAAAGAGGCATTACCTCCCTCTCCAAAGAACGAAGTCACTGCCGAACCCGCAGCTGGCGACCCATTATTACCTCTGAGAGAAAACGGAGAAAAGGAAGAGGTGCCGCCATCTACCGAGAGCGACACCAAGCCAGCAGTCAACGGAACAGTACCGCCATCTGTGGACGGTGGGCAGGACTGGAAACCGCAGGACAAGTGCTATTTTTGCGTGGACGGCAATCTGGATAGTGAAAACCATTCGCACGGGGTACTGAGTCCCCGCCATTCAGAGTCAGAGTCGAGTGACAGTCCAAGCGACAGCGAAGCCCCGGCTTCACTAACCCCTTCCCAAGCCGCGCGACTACGCGGCATCCCCACCCCAAACATGACTACAATGGAGATGAGCGCTCTAGCCGCAGTTGCTGCTCTTGCCGGCGGCGCAGCCGGCCCAGGGGGCGCCCCTACTCCACATCTCCCCTTCTACCCGATGCATAACTGGTATCTCACGCATGTGGCGCGCAGCTTTCAAGCCGAGAGGCTTCAAGCTGCTGCGGCTGAGCAGGCGGAACGTGGAAGTGGGGAGCAGCCTTTAGATTTGAGTAAAGGCTCCTCTGCGCCTGAGAAGGTTCCGAATAATATTAGGCTTCCTACATTGGACACGAAGCATATTTTTAATCCTGATTTTAGAGCTAAACCTCGAATGTCCACCGTGGCTGGACGAAGAACATACACAGAAGACGAGCTTCAAGCCGCGTTGCGCGACATCCAAAGCGGAAAACTAGGTACTCGGCGCGCCGCTGTGATATACGGAATACCTCGTTCTACCCTACGAAATAAAGTATACAAGCTAGCGTTGGAAAAGGAGCGTGAAACGCACTTGAACAACGCTGCGCCTCTTAAGCTCGAAGAAGAAGAAGTTATCATGGACGAGGACAAAGAGTTATCAGGAGCAGAGGAAGAGAAAGAGGTAGAGAAAGCCTTGGAAGCGCCTCTGTTGTCCATGGCCGACATCTTAAGATTCTCCAAGGTGGACAACTCCCCAGAAGCCCTCAAAGCAATGCTCCTAAAGTCCAAAGAAGCGCACGAAGGCTGGCCAATGGAAGGCGAAGTCGCGCCCTACATCCAAAGCCTCATCTTAGCCAGCCAAAAAGCCGGAGACGCTTCAGTGATGAACCACATCGAGTTCGTAAAGCGCATGATCGCAGAAGAAACACTACTCAAAGCAAAACTCAACGGAGATTCCGACAAACACCACAGATCAAACGTGGACAAACCGCGGTCGATTGCAGAGTCCTCAGACATGGAAACAGAAGAATCATCCTCAAGCGTCATACTCAAAATTCCGTCCTTTAGGCCCACTACTAGCAAAAACGGTTCGGATAGCTTGTACCGTGCTGGGGACAGCTCGATGGTGTCGCCGCCAGTAACGAGCGACTCGAGTAGTCCTCCGATTATGGCTCCTAAGATGTCGATTAAAGATGTGAAGGACGTTATAGCTCAGAGTATTAGCCAGAAGTTTCAGCAGAGCTTGGAGCAGCCGATACGACCCATTATGGAGATGGATTTCAAACGCAACGACTTCACGCCTCCGCTTGGTTCGGGTGGGATCTCGGTTATTAAAAGCAACCCGCAGGATGTTTCGCGTTTCTCGCAGGCTAACAAACAGATGCAGCAGCATAATTCTGGGGGGAACAATTCCGCGGGAGGCAAAGGTACAAGACCAAAACGTGGCAAATACCGAAACTACGACAGAGACAGCTTGGTAGAAGCAGTACGCGCAGTACAAAGAGGCGAAATGTCAGTCCACAGAGCTGGTAGTTACTACGGAGTTCCACATTCCACTCTCGAATACAAGGTCAAAGAACGACATTTGATGAGACCGCGTAAACGCGATCCAAAACCCAATCCAGTCGACGAGAAGATTGCCAGTTTGAAGCAGAACGATATCAGAATTGCGCAAGAAAAGATAAAGCCCTCAGTGGTTATAAAGCCACAACAGAAGTTTTCGCCTACGTCCCCAAATGGGATCAAACTCCCGATGTTCGAGCCTGGAATGGCAGCTGGATTGCCAGGCTACAATGCGCCGCATCCATTCCCGTTCTGGCCGCACCCAGGCTACCCTCACATTCCTCTGGACTACCCCAGAAATTCCTCAGCAACATTCCCTCCAAACCCAGAGTTTTTCGCGTCGCAGATGATCCAGAAGCTTCAGGAGGAGTCTTCTCGGTCgctcaaaaaccaaaactcCACGACCCCTACTCTAGCCTCGGCAAGCGCCCGACAAATGGCAGAGTCCCTTCTTGACGCCGCAGGTTCAAACGGATCCTTCTTAGACGGGATTATACGATCTAGTTTGGAATCAGGCGTACCGATCAACGACGACAAATCGCCGAAAGACGAGAAGTGTCTTGCGCCTAAGAAGATGTCCAACAAGGCTTTATTAGACCAGTTGTGTCGAAACAGTCGTTTAACGCCGCTTAGCAAAGGACCGAACCATGACAACAGCTCGGGTGATGAGTCCTACAACAGAGGGAATAGTCCACCTATCAATTTTGCCACAGGTTCAAACTCAAAAAGCGACGACTCTCCCCAACGTCGCAACTCAGAACTTCATACAATAGAACTCAATTCTAACGACTCAAATGACTCTTCACCTAGACGTACACCACCTTCAAATGCCGAGGACACGGACTCTCCAATGACAAACAACAAACCTCATGGACGCATCTACTTGAAGCAAGACTTGGTCAATCCTGACAACTTGAAACCCGAGATGTTAGTGCGAGGCTACATTCCGGAATTAAATAGAAATGGCGGCAGCGGACTTTGCGACAATGATAGTGCCTCAGAAAACGAAGCCACTGCGCAGGACTGA
- Protein Sequence
- MARKCLERIAEELMGRRKWKLYQESMSRNYLQPLNNNAVKQEKQFNNHTAEKVQKEVKEALPPSPKNEVTAEPAAGDPLLPLRENGEKEEVPPSTESDTKPAVNGTVPPSVDGGQDWKPQDKCYFCVDGNLDSENHSHGVLSPRHSESESSDSPSDSEAPASLTPSQAARLRGIPTPNMTTMEMSALAAVAALAGGAAGPGGAPTPHLPFYPMHNWYLTHVARSFQAERLQAAAAEQAERGSGEQPLDLSKGSSAPEKVPNNIRLPTLDTKHIFNPDFRAKPRMSTVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERETHLNNAAPLKLEEEEVIMDEDKELSGAEEEKEVEKALEAPLLSMADILRFSKVDNSPEALKAMLLKSKEAHEGWPMEGEVAPYIQSLILASQKAGDASVMNHIEFVKRMIAEETLLKAKLNGDSDKHHRSNVDKPRSIAESSDMETEESSSSVILKIPSFRPTTSKNGSDSLYRAGDSSMVSPPVTSDSSSPPIMAPKMSIKDVKDVIAQSISQKFQQSLEQPIRPIMEMDFKRNDFTPPLGSGGISVIKSNPQDVSRFSQANKQMQQHNSGGNNSAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRIAQEKIKPSVVIKPQQKFSPTSPNGIKLPMFEPGMAAGLPGYNAPHPFPFWPHPGYPHIPLDYPRNSSATFPPNPEFFASQMIQKLQEESSRSLKNQNSTTPTLASASARQMAESLLDAAGSNGSFLDGIIRSSLESGVPINDDKSPKDEKCLAPKKMSNKALLDQLCRNSRLTPLSKGPNHDNSSGDESYNRGNSPPINFATGSNSKSDDSPQRRNSELHTIELNSNDSNDSSPRRTPPSNAEDTDSPMTNNKPHGRIYLKQDLVNPDNLKPEMLVRGYIPELNRNGGSGLCDNDSASENEATAQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -