Cpal012425.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Carterocephalus palaemon
Gene Symbol
stc
Assembly
GCA_944567795.1
Location
CALYMS010000170.1:119923-140505[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 31 0.076 7.4e+02 0.4 2.3 2 10 535 543 535 550 0.85
2 31 2.2e-05 0.22 11.7 16.9 4 19 551 566 549 566 0.93
3 31 2.2e-08 0.00022 21.3 12.1 1 19 602 620 602 620 0.97
4 31 1.5 1.4e+04 -3.7 0.3 8 11 625 628 624 628 0.86
5 31 0.00045 4.4 7.5 11.1 1 19 659 677 659 677 0.98
6 31 9.9e-07 0.0097 16.0 11.9 1 19 718 740 718 740 0.89
7 31 1.2 1.1e+04 -3.3 2.3 5 10 769 774 769 774 0.95
8 31 0.0014 14 6.0 11.3 1 13 780 792 780 798 0.97
9 31 2.2e-06 0.022 14.9 14.5 1 19 807 825 801 825 0.88
10 31 0.00016 1.6 9.0 8.0 1 13 878 890 878 890 0.98
11 31 0.12 1.1e+03 -0.2 0.3 2 10 891 899 891 901 0.95
12 31 1.5e-06 0.015 15.5 13.7 1 19 905 923 899 923 0.88
13 31 0.00016 1.6 9.0 8.0 1 13 976 988 976 988 0.98
14 31 0.12 1.1e+03 -0.2 0.3 2 10 989 997 989 999 0.95
15 31 1.5e-06 0.015 15.5 13.7 1 19 1003 1021 997 1021 0.88
16 31 0.00016 1.6 9.0 8.0 1 13 1074 1086 1074 1086 0.98
17 31 0.12 1.1e+03 -0.2 0.3 2 10 1087 1095 1087 1097 0.95
18 31 1.5e-06 0.015 15.5 13.7 1 19 1101 1119 1095 1119 0.88
19 31 0.00016 1.6 9.0 8.0 1 13 1172 1184 1172 1184 0.98
20 31 0.12 1.1e+03 -0.2 0.3 2 10 1185 1193 1185 1195 0.95
21 31 1.5e-06 0.015 15.5 13.7 1 19 1199 1217 1193 1217 0.88
22 31 0.093 9.1e+02 0.2 16.7 1 18 1256 1272 1256 1273 0.81
23 31 0.36 3.5e+03 -1.7 1.0 8 13 1278 1283 1277 1284 0.85
24 31 0.093 9.1e+02 0.2 16.7 1 18 1318 1334 1318 1335 0.81
25 31 0.36 3.5e+03 -1.7 1.0 8 13 1340 1345 1339 1346 0.85
26 31 0.00099 9.7 6.5 9.2 10 18 1381 1389 1378 1390 0.92
27 31 0.36 3.5e+03 -1.7 1.0 8 13 1395 1400 1394 1401 0.85
28 31 0.00099 9.7 6.5 9.2 10 18 1443 1451 1440 1452 0.92
29 31 0.36 3.5e+03 -1.7 1.0 8 13 1457 1462 1456 1463 0.85
30 31 2.7e-08 0.00027 21.0 12.7 1 17 1488 1506 1488 1512 0.83
31 31 0.0024 24 5.2 13.1 1 19 1518 1535 1518 1541 0.76

Sequence Information

Coding Sequence
ATGTCCCAGTGGAACAACTCTTACGCTTACAACAATCAGTATCAGAGCCCTAACACCTGGAATGGTGACATGAGCGGCCAGTACGTAAATCAAGCTTATTATCCCAATAGACAATTTGATTCCAGTAACCAGTATGTCAGTTTTAATGAGTTTCTAGCCCAAATGCAGACCTCCGGCGTTCCTGCTACAAATCCTGTTACTTACAATAACATACAGTATCAGAACTACCCCAATCCCAATAATCAGTTTAATTACCAAAATATCCCATCACAAAATGCTCAGATAGAATTTAATTATGGTACCAACAGCACAACCAGTATAGCACCATCAAATAGTTCCAACCAATCTTATCAAGCTAGCTCCCAAAATCAAAACCAACCTAAGTATGATGCAACagaaactaataaatataaagaaatGGTTTTCAATTCCAAATTGACCCCAACCGCAACTGAATTTGTGCCAAAAAGTTCAGGGGTTGATATATCTAGCAATTCTATTGATATATCAAAGCCAATCAAACCCTCCACTAGCAAAATTAGTAGTGAAATTGTAAATACAAAAAGTTCTCATAGCCAAAGTAAGCCATCTAATACAGAAACAAATTGGAGAGAAAGACCACAAACTTCCCAGCAGAATGAAAGTTCTCATGTTGAAGAAACTATTGAGAGACAACCCAGGAGTTATAGAGGACAGAATAGAAATGGAGCTAATAACAATCATGATAAAAATGAACATGGCAATGAGTCTAATAATCAGCGGCAAGACTCTTACTATCGCAATCAGGAATCTGCAAGAAGTAACAATGAATCTAATGGCTACAATAATGAAACTAGATATAACACTGAAAACACTAAAAGCGATAGCACAGAAGGAAGTTCTAGGTACCAGGAACGGGGCAGACGTAATAATGAGTCTGGCAATTATCAGAGGTCTAACAATCGCTACCATGACTCGCAAAGTCAAAGCCAAGAGCAGGGTCGATCTGAGGGCAATTACCGTGGGGAGGGGAGCCAATCAAGGCCAAATTCTAAGCAGAGCCTTAAAGGTAAACAGGACACAGATGCAGGACGAATGTTCTTCAATAGTTCAATGCCAAAAAGTAGTCAGGATGTAAGGAACGGCAGAGGAGAAGGTTCTGGACGCCGGGGCTGGGCGGGCAGCCAGAGAGTGAGGCCAGCTGAACGGAGCTATGTAGAGGATGAGCAATATGCTAATACGTATCTTCAGAGCAGGGAAGAAAGATTTAGTAAAGAGCCTAAAGCAAGTCCTGTGAGAAATAGGAATAGTAACAAAAATGGAACCAATCATGCAGTTCACACAGAGATGACCCAACGTGAGCGTCTAAGTGAACAGTTGGACAAGGGCACACTGGAGTGCCTGGTGTGCTGCGAGCGCGTGAAGCAAACAGATTCTGTGTGGTGGTGCTCCAACTGTTACCATGTGCTGCATCTCCGGTGCATTAGGAAATGGGCTCTGAGCAGTGTAATTGATGGCAAATGGCGGTGTCCCGCGTGCCAGAACGCGTCCAACGATATTCCGACGGAGTACTGGTGCATGTGCGGCGCCGTGCGCAACCCGGAGTAccagcgcggcgcgggcggcgcgcacaCGTGCGGTCGGGCGTGCCAGCGAGGGCGCGCGTGCCCGCACCCGTGCACGCTGCCCTGTCACCCGGGGCCGTGCCCGCCCTGCCAGGCCACCGTTAGCAAGCATTGCGGTTGCGGTACGGAGACACGCTCGATTCTATGTAGCAGTAAGCTGCCTCAGGTGTGTGGCCGCGTGTGCAAGAAGAAATTGGATTGCGGTGTGCATACTTGCGAGAAGGAGTGTCATGAGGGGGCCTGCGATGAGTGCACCGAGACTGTTACACAGGTTTGCCACTGCGCGGTGTCGAAAACGCGTGTGGTGGCGTGCGAACGCGGCGTGACGGACACGTGGGCGTGCGGCGCGGAGTGCGGGCGCGTGCTCGCGTGCGGCGCGCACGTGTGCCGGCGCGCGTGCCACGCCCCGCCGTGCAGCGCCTGCCCGCGCTCGCCCGACAACGTGCCCGCGTGCCCATGCGGGAAGACCAGGATACAGAAGGGCCCGCGCAAGGCGTGTACGGACCCCATCCCGCTGTGCGACAACATCTGCGCCAAGCCGCTGCGCTGTGGGCCCGACGAGGAACGCCACTTTTGCAAGGAGAAGTGCCATGAAGGCGAGTGTCCAGTGTGCCCTGACTCGACGCACCTGCAGTGCCGCTGCGGGCACTCGACGCGCGAGGTTCCTTGCCGCGACCTGCCCGAGGTCCGCTCCGGCGTTACCTGCCAGCGCAAGTGCAACAAGAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGGGTGCGGCCGCAGCCTGTTCTGCCAGCAGCACCGCTGCGAGGAGTTCTGCCACGCCGGCCACTGCGCGCCCTGCCCGCGCCTCAGTACGgtttatattgtatttgtaaCAGAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAGTTCTGCCACGCCGGCCACTGCGCGCCCTGCCCGCGCCTCAGTACGgtttatattgtatttgtaaCAGAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAGTTCTGCCACGCCGGCCACTGCGCGCCCTGCCCGCGCCTCAGTACGgtttatattgtatttgtaaCAGAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAGTTCTGCCACGCCGGCCACTGCGCGCCCTGCCCGCGCCTCAGTACGgtttatattgtatttgtaaCAGAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAAAAATGAGCTGCGGCCGGCACCGGTGCCGCGAGGTGTGCTGCGCGGGCGGCGAGCACATGTGCGCGGTGGTGTGCGGCCGCAGCCTGTTCTGCCAGCGGCACCGCTGCGAGGAGTTCTGCCACGCCGGCCACTGCGCGCCCTGCCCGCGCCTCAATTTCGACGAGGTGAGATGCGAGTGCGGGCAGGCGGTGCTGTACCCGCCGGtgcggtgcggcgcgcggccgcccgcgtgcagcgcgccgtgcccgcgcgcgcgcccctgCGGCCACCCGCCGCACCACTCGTGCCACGTGGGCGACTGCCCGCCGTGCGTCGTGCTCACCGCGCGCGTCTGCCACGGCGGACACGAGGTGAGATGCGAGTGCGGGCAGGCGGTGCTGTACCCGCCGGTGcggtgcggcgcgcgcccgcccgcgtgcagcgcgccgtgcccgcgcgcgcgcccctgCGGCCACCCGCCGCACCACTCGTGCCACGTGGGCGACTGCCCGCCGTGCGTCGTGCTCACCGCGCGCGTCTGCCACGGCGGACACGAGGCGGTGCTGTACCAGCCGGtgcggtgcggcgcgcggccgcccgcgtgcagcgcgccgtgcccgcgcgcgcgcccctgCGCCCACCCGCCGCACCACTCGTGCCACGTGGGCGACTGCCCGCCGTGCGTCGTGCTCACCGCGCGCGTCTGCCACGGCGGACACGAGGTGAGATGCGAGTGCGGGCAGGCGGTGCTGTACCCGCCGGTGcggtgcggcgcgcgcccgcccgcgtgcagcgcgccgtgcccgcgcgcgcgcccctgCGCCCACCCGCCGCACCACTCGTGCCACGTGGGCGACTGCCCGCCGTGCGTCGTGCTCACCGCGCGCGTCTGCCACGGCGGACACGAGGAAAGGAAAACAATTCCGTGTTCGCAAGAGGAGTTCTCGTGCGGCCTGCCCTGCGGCAAGCCGTTGCCCTGCGGCAAGCACACCTGCATAAAAATCTGCCACAAGGGGCCCTGCGACACCGGcaaGTGCACGCAGCCGTGCACGGAGAAGCGCGCGTCGTGCGGGCACCCGTGCGCGGCGCCGTGCCacgagggcgcgggcggcgcgtgcccGAGCAGCGCGCCGTGCCGCCGCTCCGTGCGCGCCACGTGCCCGTGCCAGCGGCGCAGCGCCGAGCGCGCGTGCTGCGACAACGCGAGGGATCTAGCTAGAATAATGAGCCAGTTGGCCATGTCGAAGATGCAAGAGGGCGGGTCCGTTGACCTGAGCGATGTGCAGCGTCCTGTCAATATGTTAAAAACGCTGGAGTGCGACGACGAGTGCCGCCAGGAGGCGCGCTGCCGCCAGCTGGCGCTCGCCCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCGTCCGCGAGCCAACCTTCGCGCAGCACGTGCACGACCGCCTCGCGGAGCTCGTGCAGCGCGCCAAGAACTCGAAGCAGAAGACGCGGTCGCACTCATTCCCGTCGATGAACCGTCAGAAGCGACAGTTCATCCACGAGATGTGCGAGCACTTTGGCTGCAAGAGCGTCGCCTACGACGCCGAGCCCAACAGGAACGTCGTGGCCACGGCTGACAGGGAGAAGTCGTGGCTGCCCGCGATGAGCGTGCTGGAGGTGCTCGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCccgtgctgcgcgcgcccgccgccgccaacgccgccgcgcccgctcccgccgccgccgccgccacgaccCTCAAGTCTACGGGTGGTTGGGCGACGCTAACATCCACCAATGCCTGGGCCGCTCGcagcgctcgcgccgccgctcAACAACAATCGCCTCAACAACAGTCTTCACAACAACAACAGTCTTCACAACAACAACAGTCTTCTCAACAACAGTCTTCACAACAACAGACGCAGAAACAGCCCGCCGCGCCCAAGATTGACTACTTCGACAATCCACCAGACAATTAA
Protein Sequence
MSQWNNSYAYNNQYQSPNTWNGDMSGQYVNQAYYPNRQFDSSNQYVSFNEFLAQMQTSGVPATNPVTYNNIQYQNYPNPNNQFNYQNIPSQNAQIEFNYGTNSTTSIAPSNSSNQSYQASSQNQNQPKYDATETNKYKEMVFNSKLTPTATEFVPKSSGVDISSNSIDISKPIKPSTSKISSEIVNTKSSHSQSKPSNTETNWRERPQTSQQNESSHVEETIERQPRSYRGQNRNGANNNHDKNEHGNESNNQRQDSYYRNQESARSNNESNGYNNETRYNTENTKSDSTEGSSRYQERGRRNNESGNYQRSNNRYHDSQSQSQEQGRSEGNYRGEGSQSRPNSKQSLKGKQDTDAGRMFFNSSMPKSSQDVRNGRGEGSGRRGWAGSQRVRPAERSYVEDEQYANTYLQSREERFSKEPKASPVRNRNSNKNGTNHAVHTEMTQRERLSEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWALSSVIDGKWRCPACQNASNDIPTEYWCMCGAVRNPEYQRGAGGAHTCGRACQRGRACPHPCTLPCHPGPCPPCQATVSKHCGCGTETRSILCSSKLPQVCGRVCKKKLDCGVHTCEKECHEGACDECTETVTQVCHCAVSKTRVVACERGVTDTWACGAECGRVLACGAHVCRRACHAPPCSACPRSPDNVPACPCGKTRIQKGPRKACTDPIPLCDNICAKPLRCGPDEERHFCKEKCHEGECPVCPDSTHLQCRCGHSTREVPCRDLPEVRSGVTCQRKCNKKMSCGRHRCREVCCAGGEHMCAVGCGRSLFCQQHRCEEFCHAGHCAPCPRLSTVYIVFVTENELRPAPVPRGVLRGRRAHVRGGVRPQPVLPAAPLRGKMSCGRHRCREVCCAGGEHMCAVVCGRSLFCQRHRCEEFCHAGHCAPCPRLSTVYIVFVTENELRPAPVPRGVLRGRRAHVRGGVRPQPVLPAAPLRGKMSCGRHRCREVCCAGGEHMCAVVCGRSLFCQRHRCEEFCHAGHCAPCPRLSTVYIVFVTENELRPAPVPRGVLRGRRAHVRGGVRPQPVLPAAPLRGKMSCGRHRCREVCCAGGEHMCAVVCGRSLFCQRHRCEEFCHAGHCAPCPRLSTVYIVFVTENELRPAPVPRGVLRGRRAHVRGGVRPQPVLPAAPLRGKMSCGRHRCREVCCAGGEHMCAVVCGRSLFCQRHRCEEFCHAGHCAPCPRLNFDEVRCECGQAVLYPPVRCGARPPACSAPCPRARPCGHPPHHSCHVGDCPPCVVLTARVCHGGHEVRCECGQAVLYPPVRCGARPPACSAPCPRARPCGHPPHHSCHVGDCPPCVVLTARVCHGGHEAVLYQPVRCGARPPACSAPCPRARPCAHPPHHSCHVGDCPPCVVLTARVCHGGHEVRCECGQAVLYPPVRCGARPPACSAPCPRARPCAHPPHHSCHVGDCPPCVVLTARVCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKICHKGPCDTGKCTQPCTEKRASCGHPCAAPCHEGAGGACPSSAPCRRSVRATCPCQRRSAERACCDNARDLARIMSQLAMSKMQEGGSVDLSDVQRPVNMLKTLECDDECRQEARCRQLALALQIRNPDVSAKLAPRYSEHVRATAVREPTFAQHVHDRLAELVQRAKNSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCKSVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAANAAAPAPAAAAATTLKSTGGWATLTSTNAWAARSARAAAQQQSPQQQSSQQQQSSQQQQSSQQQSSQQQTQKQPAAPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-