Cpal002723.1
Basic Information
- Insect
- Carterocephalus palaemon
- Gene Symbol
- Usp8_1
- Assembly
- GCA_944567795.1
- Location
- CALYMS010000031.1:819924-823525[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.2e-06 0.028 14.3 0.3 8 49 190 228 188 229 0.83 2 5 0.00043 1.7 8.6 0.5 37 49 269 281 260 282 0.76 3 5 0.00043 1.7 8.6 0.5 37 49 322 334 313 335 0.76 4 5 0.00043 1.7 8.6 0.5 37 49 375 387 366 388 0.76 5 5 0.0013 5.2 7.1 0.6 37 48 428 439 419 439 0.76
Sequence Information
- Coding Sequence
- ATGGTTCTGAAGGTCAAGGTCAGACTCAAGTACTCGCACAACCAAATCGTCTGGCTCTTCCGCCGAGGGCGCGGGCTGACGGGCCTCAAGAACCTCGGCAACACCTGCTACATGAACTCCATCATCCAGTGCCTCAACAACACCGCCATACTCGTCACGTACTTCTGCAACGGACAGTACCTAGAGCACGTCAACAgGTCGCACAGCACACGCGGTGCGATCGCCGAGGAGCTGGCGGCGGTGGTGCGCGCGCTGTGGTCCGGTCAGTACCGGTTCATAGCCACCAAGGACCTGAGGAATGAGGTGGGCAAGCACCAGCGCGCGTTCCGCGGCTCCGAGCAGCAGGACTCGCACGAGTTCCTCACCATCCTCATGGACTGGCTGCACCTCGACCTGCAGTTCGCCATCAAACCACCGCACAAGGAGAGTATGGGCGCGAGCGAGCGCGCGTGGGCGGAGTACACGCGCTGCAAGGAGAGCCTCGTGCTGCGGCTGTTCTACGGCCAGATCCGGTCCACCGTGCGCTGCACCACGTGCGCCGCCAGCTCCGCCACCTACGACTCCTTCTCCAACCTGTCGCTCGagctgccgccgcacgcgcagcGCTGCACGCTCGCCGACTGCCTCAAGCTGTACCTGAACGGCGAGACGGTCCCCGGCTGGAACTGCCCCACGTGCAAGGAGAAGCGCGACGCGGTCAAGAAGCTGGACATCTCGCGCCTGCCGCCCGTGCTGGTCATACACTTCAAGAGGTACGCTCTGACTCTGTTGCGGCAGGACTGCCTCAAGCTGTACCTGAACGGCGAGACGGTCCCCGGCTGGAACTGCCCCACGTGCAAGGAGAAGCGCGACGCGGTCAAGAAGCTGGACATCTCGCGCCTGCCGCCCGTGCTGGTCATACACTTCAAGAGGTACGCTCTGACTCTGTTGCGGCAGGACTGCCTCAAGCTGTACCTGAACGGCGAGACGGTCCCCGGCTGGAACTGCCCCACGTGCAAGGAGAAGCGCGACGCGGTCAAGAAGCTGGACATCTCGCGCCTGCCGCCCGTGCTGGTCATACACTTCAAGAGGTACGCTCTGACTCTGTTGCGGCAGGACTGCCTCAAGCTGTACCTGAACGGCGAGACGGTCCCCGGCTGGAACTGCCCCACGTGCAAGGAGAAGCGCGACGCGGTCAAGAAGCTGGACATCTCGCGCCTGCCGCCCGTGCTGGTCATACACTTCAAGAGGTACGCTCTGACTCTGTTGCGGCAGGACTGCCTCAAGCTGTACCTGAACGGCGAGACGGTCCCCGGCTGGAACTGCCCCACGTGCAAG
- Protein Sequence
- MVLKVKVRLKYSHNQIVWLFRRGRGLTGLKNLGNTCYMNSIIQCLNNTAILVTYFCNGQYLEHVNRSHSTRGAIAEELAAVVRALWSGQYRFIATKDLRNEVGKHQRAFRGSEQQDSHEFLTILMDWLHLDLQFAIKPPHKESMGASERAWAEYTRCKESLVLRLFYGQIRSTVRCTTCAASSATYDSFSNLSLELPPHAQRCTLADCLKLYLNGETVPGWNCPTCKEKRDAVKKLDISRLPPVLVIHFKRYALTLLRQDCLKLYLNGETVPGWNCPTCKEKRDAVKKLDISRLPPVLVIHFKRYALTLLRQDCLKLYLNGETVPGWNCPTCKEKRDAVKKLDISRLPPVLVIHFKRYALTLLRQDCLKLYLNGETVPGWNCPTCKEKRDAVKKLDISRLPPVLVIHFKRYALTLLRQDCLKLYLNGETVPGWNCPTCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -