Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: -
Assembly: GCA_944567795.1
Location: CALYMS010000167.1:191020-209914[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.77 45 4.9 9.0 1 23 257 279 257 279 0.98

2 10 0.2 12 6.8 1.0 2 23 287 308 287 308 0.96

3 10 0.18 11 6.9 2.1 1 23 1528 1550 1528 1550 0.97

4 10 1.2e-05 0.00069 20.0 0.8 2 23 1555 1576 1554 1576 0.96

5 10 0.027 1.6 9.5 0.6 1 23 1582 1604 1582 1604 0.97

6 10 0.011 0.63 10.7 2.7 2 21 1611 1630 1610 1635 0.93

7 10 1 59 4.5 1.6 1 23 1643 1666 1643 1666 0.82

8 10 3.1 1.8e+02 3.0 0.1 4 23 1675 1697 1673 1697 0.87

9 10 7.9e-06 0.00046 20.6 0.8 1 23 1706 1728 1706 1728 0.97

10 10 0.023 1.4 9.7 0.7 1 23 1734 1757 1734 1757 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.77	45	4.9	9.0	1	23	257	279	257	279	0.98
2	10	0.2	12	6.8	1.0	2	23	287	308	287	308	0.96
3	10	0.18	11	6.9	2.1	1	23	1528	1550	1528	1550	0.97
4	10	1.2e-05	0.00069	20.0	0.8	2	23	1555	1576	1554	1576	0.96
5	10	0.027	1.6	9.5	0.6	1	23	1582	1604	1582	1604	0.97
6	10	0.011	0.63	10.7	2.7	2	21	1611	1630	1610	1635	0.93
7	10	1	59	4.5	1.6	1	23	1643	1666	1643	1666	0.82
8	10	3.1	1.8e+02	3.0	0.1	4	23	1675	1697	1673	1697	0.87
9	10	7.9e-06	0.00046	20.6	0.8	1	23	1706	1728	1706	1728	0.97
10	10	0.023	1.4	9.7	0.7	1	23	1734	1757	1734	1757	0.98

Sequence Information

Coding Sequence: ATGAATATAAGTGTAAGCCTAACACCCAGTGGAGCGGTGTGCGAGGGTTGTTTAAGTGTGGATAGAAAATTGTCCTTTGTGGTCGATGATAAGGGCAAGAGAATGTTTTGCGAGTTTCTTAATGAAATGGATGTGAGCAGACCCGTCCTGGTCTGCTGGGAGTGTGCCGCCTTGATGCGGAGGACGCTGAGGTTTAAGGAACAGGTGCAACGCGCTCATTGGATCCTCTCCCAACACCAGCCTATACAGGCTGCATCTTTATCAACGCTGGGGATATCGTCCAGGAGCACTGTCCTGGAGTGCAGGCTCGCACAGCCGTCGCCGCTGGACTGCGTGACCTTCGTGAAGGTGGAGGAGGAGGACCTGGTCGACGACCACATGTCCCAGGGTGACTTCGGGGCCAGTGCTGATGATGAAGACAAACAGATTGTTCTCAAGTCAGATCACAATGACGACGACGAAGCAACGGAGAAACCGAAGGCAAGAAGATCGAGAAGAGCAAAGAGCACGGAAGGGTTCAGCGAGTCCGACGATGAGCCGCTGAGGATGCAGAAGAAGGAAGAGAAGACCAGCAGAAGGAGAAAGAAGGAGACTCTGCGCGCTCGCCGCGAGAAGCCGGCGGGCGTGGTGCAGAACAGCCGCGTGCAGCGCAAGCTGGAGACGTTGAACGTCGCTCCGGGACAGCTGGAAATGGTCGTGCTCAGCTGGGACGAGGTGGAGACGGAGCgccagcgcgcgctcgccggcGACGCGTACGCCCGGCAGCCGCACCGCTGCGAGCACTGCGCGCTCGGGTTCAACCACCGCTGCAAGCTGGACGACCACATGAGGAAACACGATCCGTCGTCCGGCCCGGCGGAGTGCAGCGCGTGCCGCGTGCGCTgccgcgacgcgcgcgcgctggccgcgcacCGCCGCCGGCACCGCGTGCGATGGCGCTGCTGCGAGTGCGGCGGCATGTGGTcgcgcgcggcggtggcggccgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTCGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACTACCGCGGGGGTGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACATGGCGCTGCTGCGAGTGCGGCGGCATGTGGTcgcgcgcggcggtggcggccgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACATGGCGCTGCTGCGAGTGCGGCGGCATGTGGTcgcgcgcggcggtggcggccgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACACGTGAGTACCGCGGGGGTGGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGTGAGTACCGCGGGGGTGGGGGGCGAACCCGGGACTCCGGCGGTGGCGGCCgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACATGGCGCTGCTGCGAGTGCGGCGGCATGTGGTcgcgcgcggcggtggcggccgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACATGGCGCTGCTGCGAGTGCGGCGGCATGTGGTcgcgcgcggcggtggcggccgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACATGGCGCTGCTGCGAGTGCGGCGGCATGTGGTcgcgcgcggcggtggcggccgaccacgcggcgcgcgcgcacgccggcAACACGCCCGCGCACACCTGCCGCGTGTGCGGCACGCGGGAGACGAGCCTGGGCAAGCTGCGGAACCACCTCAAGAGCCACTCGGAGCGGCAGCGCTGCGAGCTGTGCGGCAAGACCTTCCGGGACCGCGCCTCGCTGCGCACGCACCTCTTCATCCACAAGGGCGAGAAGGAGTACTCGTGCCCCCGCTGCGACAAGCGTTTCCTGTTCAAGCGAGCCATGGAGGTCCACCTGGTGACGCACGACGCCTCCGCCCTCCTCTACTGTCACCAGTGCGACATGAACTTCAAGAACCGCATGTCCCTGAGCCAGCACCTCAAGTACAACCTCAAGCACGTGGACCCCGCCAGGCTCAAGCACGCGTGCCATTTATGCGACAAGCGGTTCCTGAAGGCGACGAGACTCGAGGAGCACAAGCTGGCCGTCCACCTCAAGCTGACGCCCgtgcgctgcgccgcgcccggCTGCCTCTTCGCGTGTTCGTCGCGGGcggtgctgcgcgcgcacgtgCGCTCGGCGCAtagagccgcgcgcgcgcgccgcgaccaCGTGTGCGACGTCTGCGGGAAGGCGTACACGACGAAGAAGAGCCTAGAAGGGCACCTGCGGTCGCACAGCGGCGAGCGGCCGTTCcgctgcgcgcgctgccccgCCGCCTTCGGGCACGAGGCCACGCTCTACAACCACACGCGCCGGCTGCACCCCAACCACAAGGCGAGCAACCATCCATCCACCaaccatccatacttccatactaatattataaatgggaaaagtaCCCGCGAGCGCTCGAACATACCCCCCACCGCGGAAGAAGGGTCTTCCGCTGCGCTCGCGTGGCCGCCCGCCGCACACATCGAGCAGTAG
Protein Sequence: MNISVSLTPSGAVCEGCLSVDRKLSFVVDDKGKRMFCEFLNEMDVSRPVLVCWECAALMRRTLRFKEQVQRAHWILSQHQPIQAASLSTLGISSRSTVLECRLAQPSPLDCVTFVKVEEEDLVDDHMSQGDFGASADDEDKQIVLKSDHNDDDEATEKPKARRSRRAKSTEGFSESDDEPLRMQKKEEKTSRRRKKETLRARREKPAGVVQNSRVQRKLETLNVAPGQLEMVVLSWDEVETERQRALAGDAYARQPHRCEHCALGFNHRCKLDDHMRKHDPSSGPAECSACRVRCRDARALAAHRRRHRVRWRCCECGGMWSRAAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGRGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETTAGVGANPGLRRWRPTTRRARTPATRPRTPAACAARGRREYRGGGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETWRCCECGGMWSRAAVAADHAARAHAGNTPAHTCRVCGTRETWRCCECGGMWSRAAVAADHAARAHAGNTPAHTCRVCGTRETREYRGGGGRTRDSGGGGRPRGARARRQHARAHLPRVRHAGDVSTAGVGGEPGTPAVAADHAARAHAGNTPAHTCRVCGTRETWRCCECGGMWSRAAVAADHAARAHAGNTPAHTCRVCGTRETWRCCECGGMWSRAAVAADHAARAHAGNTPAHTCRVCGTRETWRCCECGGMWSRAAVAADHAARAHAGNTPAHTCRVCGTRETSLGKLRNHLKSHSERQRCELCGKTFRDRASLRTHLFIHKGEKEYSCPRCDKRFLFKRAMEVHLVTHDASALLYCHQCDMNFKNRMSLSQHLKYNLKHVDPARLKHACHLCDKRFLKATRLEEHKLAVHLKLTPVRCAAPGCLFACSSRAVLRAHVRSAHRAARARRDHVCDVCGKAYTTKKSLEGHLRSHSGERPFRCARCPAAFGHEATLYNHTRRLHPNHKASNHPSTNHPYFHTNIINGKSTRERSNIPPTAEEGSSAALAWPPAAHIEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -