Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: RREB1
Assembly: GCA_944567795.1
Location: CALYMS010000395.1:103613-111256[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.011 0.63 10.7 0.5 1 23 81 104 81 104 0.96

2 11 0.021 1.2 9.9 0.1 1 23 292 314 292 314 0.97

3 11 0.0011 0.065 13.8 0.4 1 23 323 345 323 345 0.99

4 11 0.00069 0.04 14.5 2.0 1 23 351 374 351 374 0.97

5 11 0.0028 0.16 12.6 1.6 1 23 735 758 735 758 0.96

6 11 0.00023 0.014 16.0 1.3 2 23 952 973 951 973 0.97

7 11 0.024 1.4 9.7 5.3 1 23 979 1002 979 1002 0.97

8 11 0.059 3.5 8.4 1.2 1 23 1033 1057 1033 1057 0.92

9 11 3 1.8e+02 3.0 0.2 1 20 1081 1100 1081 1104 0.77

10 11 0.021 1.2 9.8 0.3 2 23 1144 1165 1143 1165 0.92

11 11 0.026 1.5 9.5 5.3 1 23 1171 1193 1171 1193 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.011	0.63	10.7	0.5	1	23	81	104	81	104	0.96
2	11	0.021	1.2	9.9	0.1	1	23	292	314	292	314	0.97
3	11	0.0011	0.065	13.8	0.4	1	23	323	345	323	345	0.99
4	11	0.00069	0.04	14.5	2.0	1	23	351	374	351	374	0.97
5	11	0.0028	0.16	12.6	1.6	1	23	735	758	735	758	0.96
6	11	0.00023	0.014	16.0	1.3	2	23	952	973	951	973	0.97
7	11	0.024	1.4	9.7	5.3	1	23	979	1002	979	1002	0.97
8	11	0.059	3.5	8.4	1.2	1	23	1033	1057	1033	1057	0.92
9	11	3	1.8e+02	3.0	0.2	1	20	1081	1100	1081	1104	0.77
10	11	0.021	1.2	9.8	0.3	2	23	1144	1165	1143	1165	0.92
11	11	0.026	1.5	9.5	5.3	1	23	1171	1193	1171	1193	0.97

Sequence Information

Coding Sequence: ATGTTCACGCTACACTCAGAAATCAAAACAGAAGTCATCAGCGAAGCCAAAGTTGGCGCCCACAACTACAGGGAAGACGACACCATGAAGATGGAACACGAGTCACGGGCCACGCGGACCACCAGCATCGACAGCGACAACCGATCGGACAGGAGCGAGGAAGAGGACTCTCGCAGATCCCGCAAGAGGGCAGCATCCACTTCACCATCACCCATGCCATTAGACAAAAGAATCGCCAGGTTCGAGTGCCCCAAGTGCAGACAACGCTTCGATTCCGTCAACGCGTTCGAAATCCACCGATATACAGTGCACGGCGAGGACACCAGAACCGGCTACGATGATCTTACCTTCGATTTCTCCAGCAAAAAGTTCCCTGAAATTGCCCGGGGGCTATCGGAACGCAGCCGCATTTCCATCAGCGAACGGTACAGATGTGAGTCGTGTTTGCACGAGTTTCCCAGCGGACAGGCGCTTGGCATCCACAAGAAGACATGCACGGTCGCAGCGAGGCTGTCCAGCCCGGACAGAGACCGCAGGGAAGACTTCTTTGCAAAATTAGATCTAAGAAACCGATCTTTCGGAATCCCTGGCACGTTGACACCACCAATGGAACGCTTCACGCCAAAATTCGACGAAGGACACGTGACATCAAATGGTATCAAACATATTGATGCTGCCAGAGACTTAGCGGACATTCAATCTATTTTAAATGTCACCTCAGCGGGTAGTTTGCTAGAGCGGTTAACTGGAACCCGTGTAGCTTTAGAGAGCTCCGTTCTTACACCACCTGATACAGTTGTCAAGGAACGTGAACAGGAAGAAACACAAGACAATTTCGCTGCGGAATTTAGGCGGATGAAGTTGCGAGGTGAGTTTCCTTGCCGGTTATGTCCAGCTAAGTTTCCTAACTTACGAGCTTTGAAAGGTCATAATAGAGTACATCTTAGTGGAACTGGGCCTGGTCCATACCAATGTAATATGTGTCCACATGCCTCTCTGGATAAAGCAGCTCTTGTACGTCACATGCGAACTCACAACGGCGACAGACCTTACGAATGTGCTGTATGTAATTATGCTTTTACAACGAAGGCAAATTGTGAAAGACATTTGCGCAATAGACACGCCAAAGTAACGAGAGAAGACGTCAAACGCTCAATAATATACCACCCATCAGAGGATCCTAATAACGATGAAGTAAATTCCAAACTAGCTCGTGATGAAGTTAAGAGGTCGTTGGCATTCCATACGCCAGAAACCGAAAGACGCAGTGAAAGTACAGGACGAGACACCCCGCTTTCCCATTACACGCCCAGTTTTATCACGGACAGACATCCAGTTACTTCTCTATCTTCCAAACCTCTTAATCAACTGACTGAAATACCATGTTTAACTCCTAAAGAATATAGTAAAGAACCGGAGCAACCATTGCCAAGAATAAAAGTTAAGGGCATCGGACAATTAACCCAAATACCGGAGTTCAGACCACCAGAACTTTCTTTCAAAGGCAATGAAGTTAGTCCACCTGAAAATTATGATGAGGAGTCTCCTGTTGATCTCAGTACTAACGACAACAGCAATTGTGATGTTCTTGATCTAAGCAAAAAGAAACGTGAGGTTGAAGAAACAGACATCAAGGTGCCACCAAGACCGACGTTCGAACAAAACGCAGCTTCTGCTGCTGCGACAGCTTATGAAAAAACCAGATTCTTGCTGGCTCAACAAAGACTCTTCGAAACTTCCCTACCGAAAATCGATCCTGCGTACTACGCATCCCAGCTCACTCAACTGTATGCCGGCGCCGTTCCGGGACTGCCCGGCTTGCCATTACCACCGTCGTTTCCTATCAATCCCTACTTTATTCCCACTTCTTTTTTTCCCCACCCAACCGACTCGCAAGAAGTTGCCGAAATAAAGCAACGCATTCAAAAAGAAATTATCAGGGGGCTAAGTATGTCGGGGGGGAGGCTTGTGACTAACGAACAAGAGACTCAGCCGAAACAGGAACCAGAGGAAGAAGAACAAAAGCCCCTGTCCCCGGTGGTAGAGACCTCCTCAACGCCGCCCCCTCTTCCTGAATCGCCACGTCCCCAAAGCGCTCCACATAATCCTCTCGCACCGCAGAACGATTCCGTAAAAATGGTAATCAAGAATGGAATCCTCATGCCTAAGCAGAAACAAAGACGCTATCGCACTGAACGGCCTTTCTCTTGCTCACAGTGCTCTGCACGCTTCACTTTACGTTCCAACATGGAACGTCACGTGAAGCAGCAGCACCCTCAACACTGGAGTGTTCGAAGGCCTGGACCGAGAGCCCCCCCACCGTATCCGACTTCAGATGCTTTGGCGGACCGTGTCAAGTACGCCCTTTTAGCTCGTCACCTTGAAAGACCTTTGCAATCGAATGAGGCTTCTCCAATAAGGAGAGATTCAGATGAAGTAGCTGACAACGAAGAAGATGAAGATGACGCTCTAGTCATTGATGAGGAACCGGAAGACAAAAAACCCGATGAACATACTGCCGCCCACCGAGCTGCCGCAGAAATCCTAATGGCTACACGGCAGCAAGAGATGACCAAAGACTTTGACTTGAAGATAGCTGGGAATCTTATAAACAAACCCATTCCCATCACGACTGATAAAACGGAAGCCGGTGTCGATGCTAATTCCGTTCCTGAGAACCTGCCCATCCCAGTTGTTCCCACCCGAAGTGACGAGGAAGAAGACGAAGAAGGGCTAGTGGCTTCCACTAGCGAAGGCAACAATTCTGGCAGCGATGAAAATAAATCGGAGTCTGACACTGGAAACCAGCCACCGAAAAAAAAGTCCGCTTACAGCTTAGCTCCAAACAGGGTGTCCTGTCCATACTGCCACCGAAAGTTCCCCTGGTCTTCGTCGCTCAGACGGCACGTGCTCACTCACACCGGCCAGAAGCCCTTCAAATGCCCCCACTGCCCCCTGCTGTTCACAACCAAGTCCAACTGCGACCGGCACTTACTCCGAAAGCACGGAGGAACTGCTCGAGCGATATTAGCTGAGCCCATTCCTGAAACAGTGAGCCCACCACAGTCTAACGACAGAGCAGTTCCGGACAGGCCTTACAAATGTGCCTCGTGTCCAACCTCCACGTTTTCTTCCCTCGAAACGTTGAAGAAACACATGTCGTCTCGCCACGGAGCCGATAGCTCTCCGTCATCGCCGAACCCTGAAGGGAATGAGGAGACTGGCGACTTGAGCTTGGTTTTCAAATGCCATCTGTGCGAGAGCTCGTTCGGGGAGCGTAGTGGCGCGCTGGGCCACCTGGCAGCGAGCCATTCCACGGAGTACGAGCAGCTGGTCAGCAAGGGGGCGCTGGATGCGGCCAGCGACCGCAGCGAAAGCGCCGATGATGATGAGCGAGGGAAGTTTCCGGATCACGCCAATCGGAAGGTGGTCTGCGCATTCTGCATCCGCCGCTTCTGGTCAGCGGAGGACCTGCGGCGCCACATGCGCACGCACTCCGGCGAACGGCCCTTCGCGTGCGACCTCTGCCGGCGGCGCTTCACACTAAAGCACAGCATGCTGCGCCACCGCAAGAAGCATCGCGAGGACCTCACTGATGATGAGGAGGTCACATCTCCGAAGACACCGGAGAATGCCGCTGATGGatACCGCTACCAGGAGGACGACGGGTCCGGCGGCGAGATCCCGAACAATGTCAACAACAACAACTCCCCGCCCTCGGCGTGCTACGACAAGAAATTCAAGCTGCAAATGACGTCGCGCAAGTATTCCTCCGAAGCAGAAAACGACACGGAGAACGGCGGAGACCTCATCGGGAAACTCCTAGGCATCCCCGATAAGACCATCATCAACAAACTCCTCTCTTCAGCAGACGAGGCCGCCAAGTTCCTCGGAGTGAACAAATGA
Protein Sequence: MFTLHSEIKTEVISEAKVGAHNYREDDTMKMEHESRATRTTSIDSDNRSDRSEEEDSRRSRKRAASTSPSPMPLDKRIARFECPKCRQRFDSVNAFEIHRYTVHGEDTRTGYDDLTFDFSSKKFPEIARGLSERSRISISERYRCESCLHEFPSGQALGIHKKTCTVAARLSSPDRDRREDFFAKLDLRNRSFGIPGTLTPPMERFTPKFDEGHVTSNGIKHIDAARDLADIQSILNVTSAGSLLERLTGTRVALESSVLTPPDTVVKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPETERRSESTGRDTPLSHYTPSFITDRHPVTSLSSKPLNQLTEIPCLTPKEYSKEPEQPLPRIKVKGIGQLTQIPEFRPPELSFKGNEVSPPENYDEESPVDLSTNDNSNCDVLDLSKKKREVEETDIKVPPRPTFEQNAASAAATAYEKTRFLLAQQRLFETSLPKIDPAYYASQLTQLYAGAVPGLPGLPLPPSFPINPYFIPTSFFPHPTDSQEVAEIKQRIQKEIIRGLSMSGGRLVTNEQETQPKQEPEEEEQKPLSPVVETSSTPPPLPESPRPQSAPHNPLAPQNDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPGPRAPPPYPTSDALADRVKYALLARHLERPLQSNEASPIRRDSDEVADNEEDEDDALVIDEEPEDKKPDEHTAAHRAAAEILMATRQQEMTKDFDLKIAGNLINKPIPITTDKTEAGVDANSVPENLPIPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGNQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGTARAILAEPIPETVSPPQSNDRAVPDRPYKCASCPTSTFSSLETLKKHMSSRHGADSSPSSPNPEGNEETGDLSLVFKCHLCESSFGERSGALGHLAASHSTEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREDLTDDEEVTSPKTPENAADGYRYQEDDGSGGEIPNNVNNNNSPPSACYDKKFKLQMTSRKYSSEAENDTENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: -
80% Identity: -