Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: -
Assembly: GCA_944567795.1
Location: CALYMS010000003.1:1845944-1872324[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00011 0.0063 17.0 1.5 1 23 426 448 426 448 0.96

2 25 0.0038 0.22 12.2 0.6 1 20 454 473 454 476 0.94

3 25 2.6e-05 0.0015 19.0 5.6 1 23 495 517 495 517 0.98

4 25 4.6e-05 0.0027 18.2 4.6 1 23 523 545 523 545 0.99

5 25 4.6e-05 0.0027 18.2 5.3 1 23 551 573 551 573 0.97

6 25 2.2e-05 0.0013 19.2 7.2 1 23 579 601 579 601 0.97

7 25 8.9e-07 5.2e-05 23.6 2.9 1 23 607 629 607 629 0.97

8 25 0.00013 0.0074 16.8 6.7 1 23 635 657 635 657 0.97

9 25 7.4e-05 0.0043 17.5 6.6 1 23 663 685 663 685 0.97

10 25 0.00077 0.045 14.3 0.5 1 16 691 706 691 707 0.97

11 25 0.00077 0.045 14.3 0.5 1 16 724 739 724 740 0.97

12 25 0.06 3.5 8.4 1.8 8 23 812 827 811 827 0.96

13 25 0.00077 0.045 14.3 0.5 1 16 833 848 833 849 0.97

14 25 0.0013 0.078 13.6 2.1 6 23 919 936 917 936 0.96

15 25 6.1e-07 3.6e-05 24.1 1.9 1 23 942 964 942 964 0.98

16 25 6.2e-05 0.0036 17.8 7.9 1 23 970 992 970 992 0.98

17 25 9.9e-06 0.00058 20.3 6.6 1 23 998 1020 998 1020 0.98

18 25 0.00019 0.011 16.2 7.4 1 23 1026 1048 1026 1048 0.98

19 25 1.2e-05 0.0007 20.0 5.0 1 23 1054 1076 1054 1076 0.96

20 25 2.9e-05 0.0017 18.8 7.3 1 23 1082 1104 1082 1104 0.97

21 25 3.8e-06 0.00022 21.6 6.0 1 23 1110 1132 1110 1132 0.98

22 25 5.1e-05 0.003 18.1 10.2 1 23 1138 1160 1138 1160 0.97

23 25 7.5e-05 0.0044 17.5 4.9 1 23 1166 1188 1166 1188 0.96

24 25 0.00091 0.053 14.1 0.3 1 23 1195 1217 1195 1217 0.96

25 25 0.019 1.1 9.9 4.4 1 23 1223 1245 1223 1245 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00011	0.0063	17.0	1.5	1	23	426	448	426	448	0.96
2	25	0.0038	0.22	12.2	0.6	1	20	454	473	454	476	0.94
3	25	2.6e-05	0.0015	19.0	5.6	1	23	495	517	495	517	0.98
4	25	4.6e-05	0.0027	18.2	4.6	1	23	523	545	523	545	0.99
5	25	4.6e-05	0.0027	18.2	5.3	1	23	551	573	551	573	0.97
6	25	2.2e-05	0.0013	19.2	7.2	1	23	579	601	579	601	0.97
7	25	8.9e-07	5.2e-05	23.6	2.9	1	23	607	629	607	629	0.97
8	25	0.00013	0.0074	16.8	6.7	1	23	635	657	635	657	0.97
9	25	7.4e-05	0.0043	17.5	6.6	1	23	663	685	663	685	0.97
10	25	0.00077	0.045	14.3	0.5	1	16	691	706	691	707	0.97
11	25	0.00077	0.045	14.3	0.5	1	16	724	739	724	740	0.97
12	25	0.06	3.5	8.4	1.8	8	23	812	827	811	827	0.96
13	25	0.00077	0.045	14.3	0.5	1	16	833	848	833	849	0.97
14	25	0.0013	0.078	13.6	2.1	6	23	919	936	917	936	0.96
15	25	6.1e-07	3.6e-05	24.1	1.9	1	23	942	964	942	964	0.98
16	25	6.2e-05	0.0036	17.8	7.9	1	23	970	992	970	992	0.98
17	25	9.9e-06	0.00058	20.3	6.6	1	23	998	1020	998	1020	0.98
18	25	0.00019	0.011	16.2	7.4	1	23	1026	1048	1026	1048	0.98
19	25	1.2e-05	0.0007	20.0	5.0	1	23	1054	1076	1054	1076	0.96
20	25	2.9e-05	0.0017	18.8	7.3	1	23	1082	1104	1082	1104	0.97
21	25	3.8e-06	0.00022	21.6	6.0	1	23	1110	1132	1110	1132	0.98
22	25	5.1e-05	0.003	18.1	10.2	1	23	1138	1160	1138	1160	0.97
23	25	7.5e-05	0.0044	17.5	4.9	1	23	1166	1188	1166	1188	0.96
24	25	0.00091	0.053	14.1	0.3	1	23	1195	1217	1195	1217	0.96
25	25	0.019	1.1	9.9	4.4	1	23	1223	1245	1223	1245	0.99

Sequence Information

Coding Sequence: ATGAACCAGGAACACCATAACATCAATACGGGTGGTGGCCAGCCGCCTGGCAATTCGGAGTCGCAGAATCAAAGAGTGCAATCTACGCAGCAGCAACAGCAGGGTACGAACCTACCCCCGACAACGTCAGCTACTGACTTGAGAGTTAACTCAGCTGCCGTGAACGTAGCGTTGTCGAGCGTTGCAAAGTACTGGGTGTTTACAAATTTATTCCCTGGACCATTACCACAAGTTTCTGTATACAATTTGCCTACAAATGCAAGGATAGAAAATGGAAAACCTGTACAGCTGTTACAGGACCTTGGTCAGACTCATGGCATACTTAATGGTGATCCAAACATCATACTTGGACATCATGCAGGTCAACCACAGGTTACCGTCTCTGCTGCTGGACAGCAGATACCAGTTCCTCAAATCATTGCCACGCAGTCAGGACAGACTCATGAAGCGTTGGTGACACATGGTCAACAACAGGAGCTTACAACCCAGCAGGCTTCAAGCGCGGCTCAGGTGACAGTGAGCGCAAGCCAGGGCTCTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGGCATCACTCGCAACAACACTTGTTACAACAACAACTCTTGGCAGCAGCACGGCCAGACCATGCCAACCAACAGaTCCAATTGACTGTAAGTGAAGATGGCATTGTGACTGTGGTTGAGCCCGGCTCTGGGAAACTTGTGGACAAGGAGGATCTGCACGAAACTATCAAGCTGCCGACAGACCACACTCTTACAGTACATCAATTGCAACAAATTGTTGGCCATCATCAGGTGATAGACAGCGTGGTGCGGATAGAGCAGGCGACCGGCGAGCCGGCCAACATCCTGGTGACGCAGAACCCGGACGGCACCACCTCGATAGAGACGAGCGCCGCCGACCCGCTAGCGATAGTCAAGGACGAGAAGGCTGTCGCCAAAATAGAGGGGGCGCAGTTTGCGATACCCGCCGAGATTAAGGACATTAAGGATTTGAAGAGCGTCGGAGCAATGGGCATGGAGGGAGCCGTGGTGAAGATATCCGGCGGCGCGTCGGAGCACGACCTGCATGCCATGTACAAGGTGAACGTGGAGGACCTGTCGCAGCTGCTCGCCTACCACGAGGTGTTCGGGAAACTCAATGCGGAGGGCTCACAGCAGACAGCTAAAGTTGTAATGAGTGAGGTAGACGCCGAGGCGGGCACGAGCGCGGCCATGTCCGAGGCGGACACGTCGCCCGGCCACCACGCCTGCGACATCTGCGGCAAGATATTCCAGTTCCGTTACCAGCTTATTGTACATAGACGATATCATGGGGAAAGCAAACCATACACATGCCAAGTATGCGGCTCCGCGTTCGCAAATCCGGTAGAGTTATCAAGACATGGAAAATGTCATTTAGCTGGCGACCCAGTTGAAAGGCAAACGAAGAGGTTAACACAAGACAAGCCGTACGCGTGCACCACTTGTCATAAAACTTTCTCGCGGAAAGAACATCTCGACAACCACGTGAGGAGTCACACGGGCGAAACGCCGTACAGATGCCAGTACTGCGCGAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGGAAACATACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGTTTCACACGCAAGGAACACTTCATGAACCACGTCATGTGGCATACGGGTGAAACGCCGCACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAGGGAGCATTTAGTGAACCATATGAGGTCCCATACAAACGATACCCCGTTTCGCTGCGAACTTTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATATTGTGGCACACGGGCGAGACCCCGCATCGCTGCGACTTTTGCTCCAAAACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACCGGCGAGTCGCCCCACCGCTGCAACTTCTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCATCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGGTGAGGGCTGCTCCATAATACTTCTGCTCCAACACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGGTGAGGGCTGCTCCATAATACTTCTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCATCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGGTGAGGGCTGCTCGGTCATACTTCCTCTCCAAGTCGTTCACGCGCCGCGAGCACCTCATCAACCATGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGGTGAGGGCTGCTCGGTCATACTTCCTCTCCAAGTCGTTCACGCGCCGCGAGCACCTCATCAACCATGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGGTGAGGGCTGCTCCATCATACTTCTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCATCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACGAGGAAAGACCATCTGGTGAACCACGTGCGCCAACACACCGGCGAGTCGCCGCACAAGTGTTCGTTCTGCACCAAGTCGTTCACGCGCAAGGAGCACCTGACGAACCACGTGCGCCAGCACACGGGGGAGTCGCCGCACCGATGCACCTACTGCGCCAAGTCCTTCACTAGGAAGGAACACCTCACCAATCATATTAGacagcacacgggCGAAACGCCACACAAGTGTACGTTCTGTTCGCGCTCGTTCACGCGGAAGGTGCACCTGAACAACCACGTGCGGCAGCACACGGGCGACACGCCGCACGCGTGCACGTATTGCAGCAAGAGCTTCACGAGGAGGGAACACCTCGTCAACCATATCAGGCAACACACGGGCGAAACTCCGTTCAAGTGTACTTACTGTACGAAGTCGTTCTCCCGGAAAGAGCACCTAACGAACCACGTTCACCTCCATACGGGGGAAACGCCGCACAAGTGCCCCTTCTGCACAAAGACTTTCTCACGCAAGGAGCATCTCACCAACCACGTCAGGATACACACAGGTGAGTCCCCTCATCGGTGTGAGTTCTGCCACAAGACTTTCACTCGCAAGGAGCACCTAACGAACCATATGAAACAGCACACGGGCGATACGCCACACGCTTGCAAATTGTGCTTGAAACCGTTCACCAGGAAGGAACATCTCAGTACTCATATGAGATCTCATAGTTGCGGCGAAAGACCTTTCAGTTGCGGCGAGTGCGGCAAATCGTTCCCTTTGAAAGGTAATCTGCTCTTCCACGAGAGGTCACACAACAAGTCGAAACCTTTCCGATGTGACGTCTGttctaaggatttcatgtgtAAAGGTCACCTGGTGGCGCATAGGCGGACGCACGGGGATGCGGGCGACGGCGGCGCGAGCGCCGAGCCCGCGCCCGACGGCGACGACTGCGGCGACTGCAACAAGTGCGACAAGGACCCGCCCGAGCGCACCGAGCGGAAGCACGACACCAGGGCATCATCAGAGAGCAGACCCACGGATAGTAATACAGCACAAAGTCAACAAACCAACACGGCAGTTATGCAAATCACCAGTCAACAAGTCCGAACGGGAGCGTCCAGCAACGCGCCAAGCGTAGCGGCCGCCGCGTTCCCGCACGCCGCCAGCCCGCAGCACCACGCCGCCGCCATCGCGCATCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQEHHNINTGGGQPPGNSESQNQRVQSTQQQQQGTNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYNLPTNARIENGKPVQLLQDLGQTHGILNGDPNIILGHHAGQPQVTVSAAGQQIPVPQIIATQSGQTHEALVTHGQQQELTTQQASSAAQVTVSASQGSHQQVPNNRVEFVQHHNIDMGHHSQQHLLQQQLLAAARPDHANQQIQLTVSEDGIVTVVEPGSGKLVDKEDLHETIKLPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLAIVKDEKAVAKIEGAQFAIPAEIKDIKDLKSVGAMGMEGAVVKISGGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGSQQTAKVVMSEVDAEAGTSAAMSEADTSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANPVELSRHGKCHLAGDPVERQTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLINHVRQHTGETPFQCGYCPKAFTRKDHLGEGCSIILLLQHTGETPFQCGYCPKAFTRKDHLGEGCSIILLLQVVHAPRAPHQPRAPAHRRDALPVRLLPQGVHEERPSGAATAPRRSRGKTIWVRAARSYFLSKSFTRREHLINHVRQHTGETPFQCGYCPKAFTRKDHLGEGCSVILPLQVVHAPRAPHQPCAPAHRRDALPVRLLPQGVHEERPSGAATAPRRSRGKTIWVRAAPSYFCSKSFTRREHLINHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTFCSRSFTRKVHLNNHVRQHTGDTPHACTYCSKSFTRREHLVNHIRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHMKQHTGDTPHACKLCLKPFTRKEHLSTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSKPFRCDVCSKDFMCKGHLVAHRRTHGDAGDGGASAEPAPDGDDCGDCNKCDKDPPERTERKHDTRASSESRPTDSNTAQSQQTNTAVMQITSQQVRTGASSNAPSVAAAAFPHAASPQHHAAAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -