Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: -
Assembly: GCA_944567795.1
Location: CALYMS010000100.1:105604-122435[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 1.1 65 4.4 0.9 2 23 76 97 75 97 0.95

2 30 5.7 3.3e+02 2.2 0.2 1 23 103 125 103 125 0.91

3 30 8.5e-07 5e-05 23.6 1.0 1 23 131 153 131 153 0.99

4 30 0.0023 0.14 12.8 8.0 1 23 159 181 159 181 0.98

5 30 2.3e-06 0.00013 22.3 0.9 1 23 187 209 187 209 0.95

6 30 0.0027 0.16 12.6 5.6 1 23 215 237 215 237 0.97

7 30 0.26 15 6.4 0.7 2 23 355 376 354 376 0.95

8 30 0.022 1.3 9.8 5.4 1 23 382 404 382 404 0.97

9 30 0.00025 0.015 15.9 0.4 1 23 410 432 410 432 0.98

10 30 1.3e-05 0.00075 19.9 1.0 1 23 438 460 438 460 0.98

11 30 8.7e-06 0.00051 20.5 2.6 1 23 466 488 466 488 0.98

12 30 2.3e-06 0.00013 22.3 1.2 1 23 496 518 496 518 0.97

13 30 9.1e-07 5.3e-05 23.6 0.2 1 21 524 544 524 545 0.96

14 30 0.14 8.1 7.3 1.4 2 23 661 682 660 682 0.96

15 30 0.04 2.4 8.9 3.6 1 23 688 710 688 710 0.98

16 30 0.00025 0.015 15.9 0.4 1 23 716 738 716 738 0.98

17 30 7.1e-06 0.00041 20.8 1.5 1 23 744 766 744 766 0.99

18 30 8.7e-06 0.00051 20.5 2.6 1 23 772 794 772 794 0.98

19 30 2.3e-06 0.00013 22.3 1.2 1 23 802 824 802 824 0.97

20 30 1.1e-06 6.2e-05 23.3 0.5 1 23 830 852 830 852 0.98

21 30 4.1e-05 0.0024 18.3 2.7 3 23 860 881 858 881 0.97

22 30 0.04 2.4 8.9 3.6 1 23 1043 1065 1043 1065 0.98

23 30 0.00025 0.015 15.9 0.4 1 23 1071 1093 1071 1093 0.98

24 30 7.1e-06 0.00041 20.8 1.5 1 23 1099 1121 1099 1121 0.99

25 30 8.7e-06 0.00051 20.5 2.6 1 23 1127 1149 1127 1149 0.98

26 30 2.3e-06 0.00013 22.3 1.2 1 23 1157 1179 1157 1179 0.97

27 30 1.1e-06 6.2e-05 23.3 0.5 1 23 1185 1207 1185 1207 0.98

28 30 4.1e-05 0.0024 18.3 2.7 3 23 1215 1236 1213 1236 0.97

29 30 0.0013 0.076 13.6 2.5 1 23 1244 1266 1244 1266 0.97

30 30 1e-05 0.00059 20.3 0.6 1 23 1271 1294 1271 1294 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	1.1	65	4.4	0.9	2	23	76	97	75	97	0.95
2	30	5.7	3.3e+02	2.2	0.2	1	23	103	125	103	125	0.91
3	30	8.5e-07	5e-05	23.6	1.0	1	23	131	153	131	153	0.99
4	30	0.0023	0.14	12.8	8.0	1	23	159	181	159	181	0.98
5	30	2.3e-06	0.00013	22.3	0.9	1	23	187	209	187	209	0.95
6	30	0.0027	0.16	12.6	5.6	1	23	215	237	215	237	0.97
7	30	0.26	15	6.4	0.7	2	23	355	376	354	376	0.95
8	30	0.022	1.3	9.8	5.4	1	23	382	404	382	404	0.97
9	30	0.00025	0.015	15.9	0.4	1	23	410	432	410	432	0.98
10	30	1.3e-05	0.00075	19.9	1.0	1	23	438	460	438	460	0.98
11	30	8.7e-06	0.00051	20.5	2.6	1	23	466	488	466	488	0.98
12	30	2.3e-06	0.00013	22.3	1.2	1	23	496	518	496	518	0.97
13	30	9.1e-07	5.3e-05	23.6	0.2	1	21	524	544	524	545	0.96
14	30	0.14	8.1	7.3	1.4	2	23	661	682	660	682	0.96
15	30	0.04	2.4	8.9	3.6	1	23	688	710	688	710	0.98
16	30	0.00025	0.015	15.9	0.4	1	23	716	738	716	738	0.98
17	30	7.1e-06	0.00041	20.8	1.5	1	23	744	766	744	766	0.99
18	30	8.7e-06	0.00051	20.5	2.6	1	23	772	794	772	794	0.98
19	30	2.3e-06	0.00013	22.3	1.2	1	23	802	824	802	824	0.97
20	30	1.1e-06	6.2e-05	23.3	0.5	1	23	830	852	830	852	0.98
21	30	4.1e-05	0.0024	18.3	2.7	3	23	860	881	858	881	0.97
22	30	0.04	2.4	8.9	3.6	1	23	1043	1065	1043	1065	0.98
23	30	0.00025	0.015	15.9	0.4	1	23	1071	1093	1071	1093	0.98
24	30	7.1e-06	0.00041	20.8	1.5	1	23	1099	1121	1099	1121	0.99
25	30	8.7e-06	0.00051	20.5	2.6	1	23	1127	1149	1127	1149	0.98
26	30	2.3e-06	0.00013	22.3	1.2	1	23	1157	1179	1157	1179	0.97
27	30	1.1e-06	6.2e-05	23.3	0.5	1	23	1185	1207	1185	1207	0.98
28	30	4.1e-05	0.0024	18.3	2.7	3	23	1215	1236	1213	1236	0.97
29	30	0.0013	0.076	13.6	2.5	1	23	1244	1266	1244	1266	0.97
30	30	1e-05	0.00059	20.3	0.6	1	23	1271	1294	1271	1294	0.98

Sequence Information

Coding Sequence: ATGGTGGAAAACCAACAGAGTGTAGTGAATGAATCGAAAGCAGTGGGGGCTCTTatcacaaatacaaatatgggTATCCAGGAACGAGAGCCCAGGAAATTGGGTATCTTTAAGGAAGAACCTAGTAATCTTGTTATACTGCCAAGTGAACCCAAAAATGAGGACATCGAGACTATAGATTCCAGGAAATCAGATGTCAAAGTGTTCAGAATCAACAACAAACTGTCATGTAACTTGTGCCCCTTCCAAACGGCTCATGGGAATCATCTGGATGCCCACATCAAAGCGCACGCCGCCCCAAGGTCGTACGACTGCGACCAATGCTACTACAAAACAGTTAAGTTAGAAGGAATACGAGCCCACAGGATAGCTCACTCCACTCGAAGAGACTACACTTGCGATATATGTAACAAATCTTTCAAGGAAAGGGGGAATATCACCAGACACATGAAGATACACTACGGCGTGAAAAGATTCTGTTGTGACGTATGTAAGAAAAGATTCATCAGCGAGTGTGATCTCAAGCACCATGTAAGGACTCATTCCGGATACAAGCCATTCTTGTGTGAAATTTGTGACAAGTCATTCAGTGAACGGAATAACCTGTTGCGTCACTTGAAGATGCACTCCGGTCTCAAGCCGTTTGCATGTGAAGTTTGCAAGAAAGGGTTTCTCCAGAAACATCACATGAAACGTCACATGAAAATGCATATTATACAAGATTTAAATGCAGAAAATCCAGACCAAGATGGTGTGCCCAAAGTTCGGGATGATTCTGATATTCTTGCTGATGATATAAAGCAAGAACAGGATGATTCTGATAGTCTTTCTGATGATATAAAGCAGGAACAGGATGATGACACTGCAACGGGTGATGTGGACAGGAGGGACAGTTTCACATCACCTAAGAACGGTAACCTTCTGTCCAACAACATCACAACTGATGACAGTGAGGATGATAATGCTGAGAATGCTACGGCTGGCAAACATAATGTGACCGCTGGCTCTGGCCTTATTGAAGGTTCCAAGTCGAGAGGAACACACCCGAGCAAAACCTTACTGTCATGTGAATTGTGTCCTTACCAGACAGTCCATGAATATAGCTTTTTGAGTCATCTCAAAGCCCACGGCAGAGGCAACTCCTACGACTGCCCGCACTGCCACTACAAGACCAGCCACAAGCGGGTGTTGGAATCCCACATCGTCACTCATACTGGAGACAAACCCTTTTCATGTCAACTCTGCACCGCAAAGTTTGCTCTACAGTCTCAACTGGTCGATCACATAAGAACACATTCCGACGAAAACCCATTTAAATGTAACGtttgtaataaatcatttgGGAACTCAACTGTACTTAAAAGGCATGTGCAAATTCACACCGGCGAGAAGCCATTTTCCTGTGATATTTGTGATAGGAAATTTACTCAGAAGGGCCACGTTCTAAGACACCAGTTGACTCATGGTGACAAACGTGACAAACAGTTCTCATGTGACGTTTGTAACAAGCAGTTTGTCCGCCCAGATCATCTACAACGGCATGTAATGCTGCACACCGACAGCAAGCAATATACGTGCGATGTATGCGACAAAAACTTCGCTACTAAGGATCAGCTGCGTAAGCACATGATTATACAAGAATTAAATGCAGAAAATCCAGACCAAGATGGTGTGCCCAAAGTTGGGGATGATTCTGATATTCTTGCTGATGATATAAAGCAAGAACAGGATGATTCTGATAGTCTTTCTGATGATATAAAGCAAGAACAGGATGATGCCACTGCAACGGGTGATGTGGACAGGAGGGACAGTTTCACATCACCTAAGAACAGCAACCTTCTGTCCGACAACATCACAACTGATGACAGTGAGGATGATAATGCTGAGAATGCTACGGCTGGCAAACATAATGTGACCGCTGGCTCTGGCCTTATTGAAAGTTCCAAGTCGAGAGGAACACACCCGAGCAAAACCTTACTGTCATGTGAATTGTGTCCTTACCAGACATTCCATGAATATAACTTTTTGAGTCATCTCAAAGTCCACGGCAGAGGCAACTCCTACGACTGCCCGCACTGCCACTACAAGACCAGCTACAGGCTGCGGTTGGAATCCCACATCGCCACTCATACTGGAGACAAACCCTTTTCATGTCAACTCTGCACCGCAAAGTTTGCTCTACAGTCACAACTGGTCGATCACATAAGAACACATTCCGACGAAAACCCATTTAAATGTAACGtttgtaataaatcatttgGGAACTCAACTGTACTTAAAAGGCATGTGCAAACTCACACCGGCGAGAAGCCATTTTCCTGTGATATTTGTGATAGGAAATTTACTCAGAAGGGCCACGTTCTAAGACACCAGTTGACTCATGGTGACAAACGTGACAAACAGTTCTCATGTGACGTTTGTAACAAGCAGTTTGTCCGCCCAGATCATCTACAACGGCATGTAATGCTGCACACCGACAGCAAGCAATATACGTGCGATGTATGCGACAAAAACTTCGCTACTAAGGATCAGCTGCGTATGCACATGGTTTCTCACTACTCTGGGAAGTCGTTCTGGTGCTTTATTTGTAAGAAGAAGTTTAAAAACAGGGATAGTCTACGAAAACATTTGAATAAGGGTCATACAAGTGAAGGCAGGAACAAATTCTGTTGCGACATCTGTACACTGTACACTATTATACAAGAATTAAATGCAGAAAATCCAGACCAAGATGGTGTGCCCAAAGTTGGGGATGATTCTGATATTCTTGCTGATGATATAAAGCAAGAACAGGATGATTCTGATAGTCTTTCTGATGATATAAAGCAAGAACAGGATGATGCCACTGCAACGGGTGATGTGGACAGGAGGGACAGTTTCACATCACCTAAGAACGGTAACCTTCTGTCCTACAACATCACAACTGATGACAGTGAGGATGATAATGCTGAGAATGCTACGGCTGACAAACATAATGTGACCGCTGGCTCTGGCCTTATTGAAGGTTCCAAGTCGAGAGGAACACACCCGAGCAAAACCTTACTGTCATGTGAATTGTGTCCTTACCAGACAGTCCATGAATATATCTTTTTGAGCCATCTTAAAGCCCACGGCAGAGGCAACTCCTACGACTGCCCGCACTGCCACTACAAGACCAGCTACAGGCTGCGGTTGGAATCCCACATCGCCACTCATACTGGAGACAAACCCTTTTCATGTCAACTCTGCACCGCAAAGTTTGCTCTACAGTCACAACTGGTCGATCACATAAGAACACATTCCGACGAAAACCCATTTAAATGTAACGtttgtaataaatcatttgGGAACTCAACTGTACTTAAAAGGCATGTGCAAACTCACACCGGCGAGAAGCCATTTTCCTGTGATATTTGTGATAGGAAATTTACTCAGAAGGGCCACGTTCTAAGACACCAGTTGACTCATGGTGACAAACGTGACAAACAGTTCTCATGTGACGTTTGTAACAAGCAGTTTGTCCGCCCAGATCATCTACAACGGCATGTAATGCTGCACACCGACAGCAAGCAATATACGTGCGATGTATGCGACAAAAACTTCGCTACTAAGGATCAGCTGCGTATGCACATGGTTTCTCACTACTCTGGGAAGTCGTTCTGGTGCTTTATTTGTAAGAAGAAGTTTAAAAACAGGGATAGTCTACGAAAACATTTGAATAAGGGTCATACAAGTGAAGGCAGGAACAAATTCTGTTGCGACATCTGTAAGAAAGTGTTGAGTAAAAAACGTAACATGATAATTCATTTACGCTTGCATTACGGGAAGCCATATACATGTGAACAATGCAATACAGCTTACGCTAACAAAGGTAATCTTTTTGTTCATATTAGAAGAAAGCATCCCGAAGAATATGAAATACGACGACGTGTACTATAG
Protein Sequence: MVENQQSVVNESKAVGALITNTNMGIQEREPRKLGIFKEEPSNLVILPSEPKNEDIETIDSRKSDVKVFRINNKLSCNLCPFQTAHGNHLDAHIKAHAAPRSYDCDQCYYKTVKLEGIRAHRIAHSTRRDYTCDICNKSFKERGNITRHMKIHYGVKRFCCDVCKKRFISECDLKHHVRTHSGYKPFLCEICDKSFSERNNLLRHLKMHSGLKPFACEVCKKGFLQKHHMKRHMKMHIIQDLNAENPDQDGVPKVRDDSDILADDIKQEQDDSDSLSDDIKQEQDDDTATGDVDRRDSFTSPKNGNLLSNNITTDDSEDDNAENATAGKHNVTAGSGLIEGSKSRGTHPSKTLLSCELCPYQTVHEYSFLSHLKAHGRGNSYDCPHCHYKTSHKRVLESHIVTHTGDKPFSCQLCTAKFALQSQLVDHIRTHSDENPFKCNVCNKSFGNSTVLKRHVQIHTGEKPFSCDICDRKFTQKGHVLRHQLTHGDKRDKQFSCDVCNKQFVRPDHLQRHVMLHTDSKQYTCDVCDKNFATKDQLRKHMIIQELNAENPDQDGVPKVGDDSDILADDIKQEQDDSDSLSDDIKQEQDDATATGDVDRRDSFTSPKNSNLLSDNITTDDSEDDNAENATAGKHNVTAGSGLIESSKSRGTHPSKTLLSCELCPYQTFHEYNFLSHLKVHGRGNSYDCPHCHYKTSYRLRLESHIATHTGDKPFSCQLCTAKFALQSQLVDHIRTHSDENPFKCNVCNKSFGNSTVLKRHVQTHTGEKPFSCDICDRKFTQKGHVLRHQLTHGDKRDKQFSCDVCNKQFVRPDHLQRHVMLHTDSKQYTCDVCDKNFATKDQLRMHMVSHYSGKSFWCFICKKKFKNRDSLRKHLNKGHTSEGRNKFCCDICTLYTIIQELNAENPDQDGVPKVGDDSDILADDIKQEQDDSDSLSDDIKQEQDDATATGDVDRRDSFTSPKNGNLLSYNITTDDSEDDNAENATADKHNVTAGSGLIEGSKSRGTHPSKTLLSCELCPYQTVHEYIFLSHLKAHGRGNSYDCPHCHYKTSYRLRLESHIATHTGDKPFSCQLCTAKFALQSQLVDHIRTHSDENPFKCNVCNKSFGNSTVLKRHVQTHTGEKPFSCDICDRKFTQKGHVLRHQLTHGDKRDKQFSCDVCNKQFVRPDHLQRHVMLHTDSKQYTCDVCDKNFATKDQLRMHMVSHYSGKSFWCFICKKKFKNRDSLRKHLNKGHTSEGRNKFCCDICKKVLSKKRNMIIHLRLHYGKPYTCEQCNTAYANKGNLFVHIRRKHPEEYEIRRRVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -