Basic Information

Insect: Carterocephalus palaemon
Gene Symbol: -
Assembly: GCA_944567795.1
Location: CALYMS010000059.1:257654-275293[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 2.5e-05 0.0015 19.0 1.7 1 23 226 248 226 248 0.98

2 30 2.5e-05 0.0015 19.0 1.7 1 23 270 292 270 292 0.98

3 30 2.5e-05 0.0015 19.0 1.7 1 23 314 336 314 336 0.98

4 30 2.5e-05 0.0015 19.0 1.7 1 23 358 380 358 380 0.98

5 30 2.5e-05 0.0015 19.0 1.7 1 23 393 415 393 415 0.98

6 30 2.5e-05 0.0015 19.0 1.7 1 23 437 459 437 459 0.98

7 30 2.5e-05 0.0015 19.0 1.7 1 23 481 503 481 503 0.98

8 30 2.5e-05 0.0015 19.0 1.7 1 23 525 547 525 547 0.98

9 30 2.5e-05 0.0015 19.0 1.7 1 23 569 591 569 591 0.98

10 30 2.5e-05 0.0015 19.0 1.7 1 23 613 635 613 635 0.98

11 30 2.5e-05 0.0015 19.0 1.7 1 23 657 679 657 679 0.98

12 30 2.5e-05 0.0015 19.0 1.7 1 23 701 723 701 723 0.98

13 30 2.5e-05 0.0015 19.0 1.7 1 23 745 767 745 767 0.98

14 30 2.5e-05 0.0015 19.0 1.7 1 23 789 811 789 811 0.98

15 30 2.5e-05 0.0015 19.0 1.7 1 23 833 855 833 855 0.98

16 30 2.5e-05 0.0015 19.0 1.7 1 23 877 899 877 899 0.98

17 30 2.5e-05 0.0015 19.0 1.7 1 23 921 943 921 943 0.98

18 30 2.5e-05 0.0015 19.0 1.7 1 23 965 987 965 987 0.98

19 30 2.5e-05 0.0015 19.0 1.7 1 23 1009 1031 1009 1031 0.98

20 30 2.5e-05 0.0015 19.0 1.7 1 23 1053 1075 1053 1075 0.98

21 30 2.5e-05 0.0015 19.0 1.7 1 23 1097 1119 1097 1119 0.98

22 30 1.4 82 4.1 0.1 3 23 1142 1163 1140 1163 0.95

23 30 0.052 3.1 8.6 0.5 2 23 1185 1206 1184 1206 0.94

24 30 0.0088 0.51 11.0 0.6 2 23 1211 1232 1210 1232 0.96

25 30 0.0003 0.017 15.6 0.3 1 23 1239 1262 1239 1262 0.94

26 30 1.5 90 4.0 0.4 1 23 1268 1291 1268 1291 0.92

27 30 0.0016 0.091 13.4 1.0 1 23 1297 1320 1297 1320 0.96

28 30 0.0003 0.018 15.6 2.7 1 23 1326 1348 1326 1348 0.98

29 30 5.6e-05 0.0032 17.9 1.3 1 23 1354 1376 1354 1376 0.97

30 30 3.8e-07 2.2e-05 24.8 0.4 1 23 1382 1405 1382 1405 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	2.5e-05	0.0015	19.0	1.7	1	23	226	248	226	248	0.98
2	30	2.5e-05	0.0015	19.0	1.7	1	23	270	292	270	292	0.98
3	30	2.5e-05	0.0015	19.0	1.7	1	23	314	336	314	336	0.98
4	30	2.5e-05	0.0015	19.0	1.7	1	23	358	380	358	380	0.98
5	30	2.5e-05	0.0015	19.0	1.7	1	23	393	415	393	415	0.98
6	30	2.5e-05	0.0015	19.0	1.7	1	23	437	459	437	459	0.98
7	30	2.5e-05	0.0015	19.0	1.7	1	23	481	503	481	503	0.98
8	30	2.5e-05	0.0015	19.0	1.7	1	23	525	547	525	547	0.98
9	30	2.5e-05	0.0015	19.0	1.7	1	23	569	591	569	591	0.98
10	30	2.5e-05	0.0015	19.0	1.7	1	23	613	635	613	635	0.98
11	30	2.5e-05	0.0015	19.0	1.7	1	23	657	679	657	679	0.98
12	30	2.5e-05	0.0015	19.0	1.7	1	23	701	723	701	723	0.98
13	30	2.5e-05	0.0015	19.0	1.7	1	23	745	767	745	767	0.98
14	30	2.5e-05	0.0015	19.0	1.7	1	23	789	811	789	811	0.98
15	30	2.5e-05	0.0015	19.0	1.7	1	23	833	855	833	855	0.98
16	30	2.5e-05	0.0015	19.0	1.7	1	23	877	899	877	899	0.98
17	30	2.5e-05	0.0015	19.0	1.7	1	23	921	943	921	943	0.98
18	30	2.5e-05	0.0015	19.0	1.7	1	23	965	987	965	987	0.98
19	30	2.5e-05	0.0015	19.0	1.7	1	23	1009	1031	1009	1031	0.98
20	30	2.5e-05	0.0015	19.0	1.7	1	23	1053	1075	1053	1075	0.98
21	30	2.5e-05	0.0015	19.0	1.7	1	23	1097	1119	1097	1119	0.98
22	30	1.4	82	4.1	0.1	3	23	1142	1163	1140	1163	0.95
23	30	0.052	3.1	8.6	0.5	2	23	1185	1206	1184	1206	0.94
24	30	0.0088	0.51	11.0	0.6	2	23	1211	1232	1210	1232	0.96
25	30	0.0003	0.017	15.6	0.3	1	23	1239	1262	1239	1262	0.94
26	30	1.5	90	4.0	0.4	1	23	1268	1291	1268	1291	0.92
27	30	0.0016	0.091	13.4	1.0	1	23	1297	1320	1297	1320	0.96
28	30	0.0003	0.018	15.6	2.7	1	23	1326	1348	1326	1348	0.98
29	30	5.6e-05	0.0032	17.9	1.3	1	23	1354	1376	1354	1376	0.97
30	30	3.8e-07	2.2e-05	24.8	0.4	1	23	1382	1405	1382	1405	0.98

Sequence Information

Coding Sequence: ATGAGTGGTGTGGCCAAAGGTCCCGTGTTCGAGGCGGGCTGCTGCCGGTGCTGCGGCGCGAGCAAGCGCTGCCGGCTGCTAAACGCGGAGTACACGTGGCAGGGCGAGCAGGAGGTGTACTCCGACATGTTCCTCGACTGCTTCGGGCTGGTGCTGTCTCACCTGGACGGGTCGGAGCGGTCGCGGCTGATCTGCGCGACGTGCGTGTCCCGGCTGCGCGAGGCGGCCGCCTTCCGCCGGCAGGTGCTGCGCTGCGAGGAGAGGCTGCTGCGGGACAGCTACCGGCTGCAGCCCGACGACGCAGGCGGCTCGGTCCCGAAGGTTGAGGAGGTGAAGATGGAGCGGGACGAGGCTGGCGGTGACTCCGACGTAGACAGGGAGAGCGCCCCGAGCCCAGCGGCCgccagcccagcggtgggcgCGGGCGAGTGGGGCGTGCGCAAGCGCAGGCGGGCCGCCGCGGGCGCGGAGCGAGGGAGACAGCTCATGCTGAGGGAGATGGAGCGCACGAGCCAGcggctgcgggccgcgcgcgccgcaccagAGAAGCGTCTCAAACCCCACCCAAAGTCCCCCGACAGCGCCGCGCGCGAGAAGACCCTCCAGTCTCAGCACAACCTCGCGACGCTGATAGAGAACTCGTTCGCGTGCCCGTTCGCCACGTCCTTCAGCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCTGGCTTCAAGGACGTACACACTGCTAAGATGATGCAGGTGGACATATACAGCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCTGGCTTCAAGGACGTGCAGAGTCCTAAGAAGATGCAGGTGGACATATACAGCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCTGCTGGCTTCAAGGACGTGCAGACCGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCTGCTGGCTTCAAGGACaCGTTGTTCAGCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCTGGCTTCAAGGACGTACACACTGCTAAGATGATGCAGGTGGACATATACAGCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCACACTGCTAAGATGATGCAAGTGGACATATACagCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCAGACCGCTAAGAAGATGCAAGTGGACATATACAGCGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCAGACCGCTAAGAAGATGCAAGTGGACATATACAGcGACTACTACTGCGCGTACTGCCGGGAGAAGTTCACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCCGCAGGCTTCAAGGACGTGCAGACCGCTAAGAAGATGCAAGTGGACATATACAGcGACTACTACTGCGCGTACTGCCGGGAGAAGTTTACGGACGCGGACAAGCTGCGCCGACACACCATGACACACGATCCTGCTGGCTTCAAGGACGTGCAGACCGCTAAGATGATGCAAGTGGACATATACAGGATAGACTGCCGTCTCTGCCCGGAACCGATCGCCGACATCGAATCCTTCAAGCACCACATAGCGACCCGACACGGCAAGCTCATCCATCCGGTCGCCGACGAGTTCCTACCGTTCCGGCTGACGACGGGGCGACTCAGCTGCGTTCGCTGCGGTGCCGGGTTCGAGTTCTTCCACGCGCTCAGGAAGCACATGGCCGACCACTACGGCTCGTGCGTGTGCGACGTGTGCGGGGCGCGGTACTTCGACGAGCGGATGTTGGTGCTGCACCAGAAGACGCACCGCGGCGTGGAGCAGTCGTACGCGTGCGCGGAGTGCGGCAAGTCGTTCCGGTCGCAGTacacgcgccgcctgcacgtggcgcgcgcgcacaccaacgagcccGCCTACCAGTGCGCGCGCTGCGACGAGCTCTTCTTCTCCTACATGCTGCGCTACCGGCACATGATCGCGGCGCACGGCGAGGAGCGCGTGttcgcgtgcgcgcgctgcgacCGCGCGTACGACAGCCGCAAGTCGCTGCGCGAGCACACGCGCCGCACGCACCTGCGCATCATGAAGCACCAGTGCACGCTCTGCGACAAGCGGTTCTACCTGCCGTCGCGGCTGCGCGAGCACATGTCGAGCCACACGGGCGAGCGCGACTTCCGCTGCGAGCGCTGCGGCAAGAGCTTcccgcggctgcgcgcgctgcgcgtGCACGCGCACTCGCACGCGCCCGGCAAGCGGTACAAGTGCGGCGAGTGTGGCGCGGCATTCACGCAGAACGTGAACCTGAAGAACCACATGAAAAGGCAGCAccgcgcgccccccgcgcccccactcctgccccccgcgcccccgcacGAGAGGCTGCTCTAG
Protein Sequence: MSGVAKGPVFEAGCCRCCGASKRCRLLNAEYTWQGEQEVYSDMFLDCFGLVLSHLDGSERSRLICATCVSRLREAAAFRRQVLRCEERLLRDSYRLQPDDAGGSVPKVEEVKMERDEAGGDSDVDRESAPSPAAASPAVGAGEWGVRKRRRAAAGAERGRQLMLREMERTSQRLRAARAAPEKRLKPHPKSPDSAAREKTLQSQHNLATLIENSFACPFATSFSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVQSPKKMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVQTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDTLFSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVHTAKMMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVQTAKKMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVQTAKKMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVQTAKKMQVDIYSDYYCAYCREKFTDADKLRRHTMTHDPAGFKDVQTAKMMQVDIYRIDCRLCPEPIADIESFKHHIATRHGKLIHPVADEFLPFRLTTGRLSCVRCGAGFEFFHALRKHMADHYGSCVCDVCGARYFDERMLVLHQKTHRGVEQSYACAECGKSFRSQYTRRLHVARAHTNEPAYQCARCDELFFSYMLRYRHMIAAHGEERVFACARCDRAYDSRKSLREHTRRTHLRIMKHQCTLCDKRFYLPSRLREHMSSHTGERDFRCERCGKSFPRLRALRVHAHSHAPGKRYKCGECGAAFTQNVNLKNHMKRQHRAPPAPPLLPPAPPHERLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -