Cpal013367.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Carterocephalus palaemon
Gene Symbol
Znf296
Assembly
GCA_944567795.1
Location
CALYMS010000187.1:160544-181325[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.0039 0.23 12.1 0.0 2 19 150 167 149 168 0.95
2 39 0.64 37 5.2 0.1 3 23 219 239 218 239 0.96
3 39 0.21 12 6.7 0.0 2 23 299 321 299 321 0.90
4 39 0.2 11 6.8 0.2 2 21 327 346 326 347 0.93
5 39 0.05 2.9 8.6 1.2 1 23 355 378 355 378 0.93
6 39 1.7e-05 0.00098 19.6 0.6 2 23 417 438 416 438 0.95
7 39 3.3e-07 1.9e-05 24.9 3.1 1 23 445 467 445 467 0.99
8 39 1.2e-06 7.3e-05 23.1 1.7 3 23 491 511 489 511 0.96
9 39 9.1e-05 0.0053 17.3 3.2 1 23 517 539 517 539 0.99
10 39 2.1e-06 0.00012 22.4 1.6 2 23 546 567 545 567 0.96
11 39 4.4e-07 2.5e-05 24.6 0.8 1 23 573 595 573 595 0.99
12 39 4.4e-07 2.5e-05 24.6 0.8 1 23 622 644 622 644 0.99
13 39 4.4e-07 2.5e-05 24.6 0.8 1 23 671 693 671 693 0.99
14 39 4.4e-07 2.5e-05 24.6 0.8 1 23 720 742 720 742 0.99
15 39 4.4e-07 2.5e-05 24.6 0.8 1 23 769 791 769 791 0.99
16 39 4.4e-07 2.5e-05 24.6 0.8 1 23 818 840 818 840 0.99
17 39 4.4e-07 2.5e-05 24.6 0.8 1 23 867 889 867 889 0.99
18 39 4.4e-07 2.5e-05 24.6 0.8 1 23 916 938 916 938 0.99
19 39 4.4e-07 2.5e-05 24.6 0.8 1 23 965 987 965 987 0.99
20 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1014 1036 1014 1036 0.99
21 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1063 1085 1063 1085 0.99
22 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1112 1134 1112 1134 0.99
23 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1161 1183 1161 1183 0.99
24 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1210 1232 1210 1232 0.99
25 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1259 1281 1259 1281 0.99
26 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1308 1330 1308 1330 0.99
27 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1357 1379 1357 1379 0.99
28 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1406 1428 1406 1428 0.99
29 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1455 1477 1455 1477 0.99
30 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1504 1526 1504 1526 0.99
31 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1553 1575 1553 1575 0.99
32 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1602 1624 1602 1624 0.99
33 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1651 1673 1651 1673 0.99
34 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1700 1722 1700 1722 0.99
35 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1749 1771 1749 1771 0.99
36 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1798 1820 1798 1820 0.99
37 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1847 1869 1847 1869 0.99
38 39 4.4e-07 2.5e-05 24.6 0.8 1 23 1896 1918 1896 1918 0.99
39 39 0.034 2 9.2 0.4 1 23 1924 1946 1924 1946 0.98

Sequence Information

Coding Sequence
ATGAGTTCTATCCTgcaaaaaactgaaataaaaatcGAAGCCCTCTGCCGAACATGCTTGTCGAAGGAGATTGAATTGCTGTCGGTATTCGATGCGTGCCCTGGGGACGAGGAAGTCACACTGGACAGCGTCATCGCAACAATTACCGGCGTTAAGATCGTGGCCGGCGATGGCTTGCCCGCGACGGTGTGCCGAGAGTGTTCGGAGCAGGCGCACAGCGCGTTCTCGTtccgcgggcgcgcgcggcgggccgaCGACGCGCTGCGCGGCCTGGTGCGCGTCAAGATGGAGGAAGCGGAGCCGGCTGTGGATGTCAAGATCGAGGAGTTCAGCGGCGATATCCATGATGACTACCTGGATATGGACTTCACCATGACACTGCCCAATGGTGACGAACACCCGCCTGATTTTGCGGCGGACGCGGTAGGCGAGTGCGACGAGGGCACATACTGTCCGGTGTGCGGCGCTAGTTTTGAGGACGCGGCGGGCCTGACGCGCCACGTGTGGCAGCGGCACGCGGACCTCATGGGCCCGAAGAAGCGGGGGCGGCCCAAGCAACTGCTCACTAGCACGATCCTGAGCCGCATGTCGGGGcgagcgggcgcgggggcggcggcgggggcggcgggggcggcgggggcggcgccgCAAGCGTGCGCGCTGTGCCGCCTCGCGGTCGACTCGCACGACGACCTGGCGACGCACATGATGCTGCACAAGGACGAGAAAGTTCTAAGCTGTCTGTGCTGCAAGAAGATGTACCTCCAGCGAGAGGACTTCGACCGTCACAGCTGCGCGCCCGCAGGCCACGAGGAGCACCAGGTTGACCACGGCGCGGCATGCGCAGTTGAGATCGCTCTACAGGAGCTACTGGCCCGCGGAGACTCGgTGGAGGTGTGCGACGGCTGCGGCGGCGTGttcggcggcgcgggcgagctggcgcgcCACCGCGACGCGGAGCACCCCGAGCGGTCGCTGCGCTGCGGGCACTGCCTCAAGGTGTTCGCGTCcctgcgcggcgcggcgcggcaccGGCGCTCGTGCGCGCTGGTGGAGCGCGCGCacgcgtgcgcggcgtgcgggCTGCGCTTCCAGCACGCGATCACGCTGAACAAGCACATCCTGCGCTCGCACGCCGGCCTGCCGGTCGCCGTGCGCttccccgcgcccgcccccgcgcccgcccccgcctccgcgcccgcgcccgcgcccgccggcacTCGCGCCGCACGGGCGGGCGTCGCGCTGGTGTGCGACACGTGCGGACGCACTTTCCGCAGGAAAGAGTTGCTATTGAGGCACGCCAAGCTTCACCAGCCTGACGCCAAGAGCTTTGAATGCGACGTGTGCAAGAAGCGGTTCAACCGGAGGAACAACTTGCGGTCCCACATGCGCACGCAcgaggcgggcgcgcgggcggcgggcgcggcgggggcggcggcggcggggggagCGGCCAGCTCGTGCCTGTGCCTGTACTGCGGCCGCGGGTTCTCCAACTCCTCGAACCTTATAGTGCACATGCGCCGCCACACCGGCGAGAAGCCGTACAAGTGTGACTTCTGCGGCAAAGGCTTCCCGCGCTCGTCGGACCTGCAATGCCACCGGCGCTCCCACACCGGCGAGAAGCCCTGCGTGTGCGGCGTCTGCGGAAAAGGGTTCTCCCGCAGCAACAAGCTGTCGCGGCACATGCGCGTGCACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACCGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACCGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagATGCCTGTACACACCGGCCTCAAGCCGTACAAGTGTCCGTACTGCGAGAAGGCGTTCTCGCAGAGCAACGACCTCACGCTGCACGTGCGCCGGCACACGGGCGACAAGCCGTAcgtgtgcgagctgtgcggcgaccggttcatacagGGCACAGCGCTGCACAACCACCGTCGCGCGCACGGCCACTTCCCGCCGGCAGggggcgcgcccgcgccgccctacgccgcgcgcgcgctgcccgactGA
Protein Sequence
MSSILQKTEIKIEALCRTCLSKEIELLSVFDACPGDEEVTLDSVIATITGVKIVAGDGLPATVCRECSEQAHSAFSFRGRARRADDALRGLVRVKMEEAEPAVDVKIEEFSGDIHDDYLDMDFTMTLPNGDEHPPDFAADAVGECDEGTYCPVCGASFEDAAGLTRHVWQRHADLMGPKKRGRPKQLLTSTILSRMSGRAGAGAAAGAAGAAGAAPQACALCRLAVDSHDDLATHMMLHKDEKVLSCLCCKKMYLQREDFDRHSCAPAGHEEHQVDHGAACAVEIALQELLARGDSVEVCDGCGGVFGGAGELARHRDAEHPERSLRCGHCLKVFASLRGAARHRRSCALVERAHACAACGLRFQHAITLNKHILRSHAGLPVAVRFPAPAPAPAPASAPAPAPAGTRAARAGVALVCDTCGRTFRRKELLLRHAKLHQPDAKSFECDVCKKRFNRRNNLRSHMRTHEAGARAAGAAGAAAAGGAASSCLCLYCGRGFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCVCGVCGKGFSRSNKLSRHMRVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQMPVHTGLKPYKCPYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGDRFIQGTALHNHRRAHGHFPPAGGAPAPPYAARALPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00277508;
90% Identity
iTF_00277508;
80% Identity
iTF_00277508;